| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is 162147870
Identifier: 162147870
GI number: 162147870
Start: 2134484
End: 2136418
Strand: Direct
Name: 162147870
Synonym: GDI_2086
Alternate gene names: NA
Gene position: 2134484-2136418 (Clockwise)
Preceding gene: 162147869
Following gene: 162147871
Centisome position: 54.12
GC content: 65.01
Gene sequence:
>1935_bases ATGTCCACGACCACGACCTACAAGACCGCTTCCGGGGTGACCTACACCGTCACCGACACCTCCTACCTGGGGCAGAACGA CTACGACGTCACGATCACGGCCAGTGACGGCACGGTCCTGCTCGATCAGGACAATATCAATCGCGGCATCGACATCCTCG GCGTCATCGACCTCGCGGCTTCCGGCGATGTCATTACGGGGTCCACCGATTCCACCTCGCTGGTCAGCCTTGCCAGCATC GGAACCTATGTCAGCGTTCCCGGCGCGACGGGCAACTTCATCGTCGGCGCCGGTGCCCTTGCCGCCAACACATATTACAT CGGCGGAACGACGACGATATCCGGCCTGGCGAACCTGGTCACCGGAACGACCATCAATGTCGTAGGGGGCACGGCAACGC TGTCCGGCAACAGCGGCAGCACCCTGCTCGGCGCCCTGAACGGATCGACGGTCAACATCGAATATGGCGGCACGTTCAAC ACCGGCGCCGCCCTCGGCAGCCTCCTGGAAGGGGCGACGGTTTCGTTCGGGAGCGGCGGCGGCACGCTGGTCATCAATGG CGGCGGCACCGCCATCAGCCTGCTGGCATCCGGTCCGCTGTCGGCCACGACCATCCAGAACTACGATCCGTCCAGGGACA CGATCGAACTTCAGGACACCGTCGCTCCGATCTCGGGCTACACGATATCCGGCGATACGACCCGGACGATCACCCTGTAC GGAAGCGACGGCACGCAGGTCGCCACCTACACGGTCAACCTGGCATCCGGCGTAAACCTGGCCAACGGAACATACAATGC CGTCAACAGCACGCAGGGCAATCCCCTGAACATCACCTACACCACCGGCAATACCTATATCGGCGTCTGCTTCCTGGCGG ATTCGATGATCCGCACACCGTCCGGCGACATCGCGGTCCAGGACATCCGCGTGGGCGACGAAATCCTGGCCTGCCCGGAC GGTGAGTGGCGGGACGGCGAACAGGGGACCGGCGAACGGCTCGGCACGGTCGTCTGGACCGGCAAGGCCCATGCCACCGT TCGTCCCGGCCTTCCGGATGACGAGGCCGGCTATCCGGTCCGCATCCTCAGGGACGCCATCGCCGACGGCGTGCCCTACA AGGACATGCTGGTCACGCCGGAACATTGCCTGTTCCTCGACGGCGTCTTCATTCCGGCCCGCATGCTGGTCAACGGCCGG TCCATCTTCCACGACCGCACCATTACCGCCTACGATTATTACCACATCGAAACGGAACGGCATTCCGTCATTATCGCGGA CGGCATGCCGACCGAAAGCTATCTCGATACCGGAAACCGCCGCTCTTTCCGTCAGGATGGGAAAATCGTCCATATCGGCG CGGGCAACGCCCGATCCTGGACGGAAGACGCCGCCGCCCCGCTGGGGGTAACGCGCGCGGTGGTCGAACCCGTCTTCCGC CGGATCGAGGCCCGGGCGCGGGACGCGGGCATCGCCAGTGCGATCGTGGGGCCGGTCCTGACCGACGATACCGGCCTTCA CCTGCTGACCGAGAACGGTCAGGCCATCCGCCGGACCCGCGATGCCAACGGGTATGCCACGTTCCTGATCCCGCCAGATG TCGGCACCGTCCGCATCGTCTCGCGCACCAGCCGGCCCAGCGATGCGATCGGCCCCTTCCTCGACGACCGGCGACGCCTC GGCGTGCTGGTCGGCGGAATCACCCTCCTCGATTCGGACAATATGCGTCTGATCGACACCTATCTGGCCGATCCGGCACT CGACGGATGGGATGTCCAGGAAGCCGGTCCGCACCGCTGGACCAATGGCGATGCCATACTGCCGCTGGGCCCGCGCCGCC CCGACAGCTTCGGCATCCTGGCCATCCAGGTACTGGCGGGCGGCCCCTATCCCGTTACGGCGGAGGCAACGGAAGCAGTC GCCCAATCAGCGTGA
Upstream 100 bases:
>100_bases CCCGCACATACCTTGTGACGTTAGCACTTTTTTCACATCGGCATGGGACCGTCGACATCCTTGAAGTCCGAAACCGGAAC AAGAGAGGAGGGTGTCAACG
Downstream 100 bases:
>100_bases CGGGCCGGATGGATGGCCGCCATACCCGTCGCGCGGTTGCCATCGGCGGCGGATCATGGCGAGATGCCGCGAATGTCACG TTTCCTTCCGATCCCGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Hemagglutinin-Related Protein; Triple Helix Repeat-Containing Collagen; Adhesin Family Protein; Peptidase Metallopeptidase; Collagen Triple Helix Repeat-Containing Protein; Collagen Triple Helix Repeat; Type I Secretion Target Repeat Protein
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MSTTTTYKTASGVTYTVTDTSYLGQNDYDVTITASDGTVLLDQDNINRGIDILGVIDLAASGDVITGSTDSTSLVSLASI GTYVSVPGATGNFIVGAGALAANTYYIGGTTTISGLANLVTGTTINVVGGTATLSGNSGSTLLGALNGSTVNIEYGGTFN TGAALGSLLEGATVSFGSGGGTLVINGGGTAISLLASGPLSATTIQNYDPSRDTIELQDTVAPISGYTISGDTTRTITLY GSDGTQVATYTVNLASGVNLANGTYNAVNSTQGNPLNITYTTGNTYIGVCFLADSMIRTPSGDIAVQDIRVGDEILACPD GEWRDGEQGTGERLGTVVWTGKAHATVRPGLPDDEAGYPVRILRDAIADGVPYKDMLVTPEHCLFLDGVFIPARMLVNGR SIFHDRTITAYDYYHIETERHSVIIADGMPTESYLDTGNRRSFRQDGKIVHIGAGNARSWTEDAAAPLGVTRAVVEPVFR RIEARARDAGIASAIVGPVLTDDTGLHLLTENGQAIRRTRDANGYATFLIPPDVGTVRIVSRTSRPSDAIGPFLDDRRRL GVLVGGITLLDSDNMRLIDTYLADPALDGWDVQEAGPHRWTNGDAILPLGPRRPDSFGILAIQVLAGGPYPVTAEATEAV AQSA
Sequences:
>Translated_644_residues MSTTTTYKTASGVTYTVTDTSYLGQNDYDVTITASDGTVLLDQDNINRGIDILGVIDLAASGDVITGSTDSTSLVSLASI GTYVSVPGATGNFIVGAGALAANTYYIGGTTTISGLANLVTGTTINVVGGTATLSGNSGSTLLGALNGSTVNIEYGGTFN TGAALGSLLEGATVSFGSGGGTLVINGGGTAISLLASGPLSATTIQNYDPSRDTIELQDTVAPISGYTISGDTTRTITLY GSDGTQVATYTVNLASGVNLANGTYNAVNSTQGNPLNITYTTGNTYIGVCFLADSMIRTPSGDIAVQDIRVGDEILACPD GEWRDGEQGTGERLGTVVWTGKAHATVRPGLPDDEAGYPVRILRDAIADGVPYKDMLVTPEHCLFLDGVFIPARMLVNGR SIFHDRTITAYDYYHIETERHSVIIADGMPTESYLDTGNRRSFRQDGKIVHIGAGNARSWTEDAAAPLGVTRAVVEPVFR RIEARARDAGIASAIVGPVLTDDTGLHLLTENGQAIRRTRDANGYATFLIPPDVGTVRIVSRTSRPSDAIGPFLDDRRRL GVLVGGITLLDSDNMRLIDTYLADPALDGWDVQEAGPHRWTNGDAILPLGPRRPDSFGILAIQVLAGGPYPVTAEATEAV AQSA >Mature_643_residues STTTTYKTASGVTYTVTDTSYLGQNDYDVTITASDGTVLLDQDNINRGIDILGVIDLAASGDVITGSTDSTSLVSLASIG TYVSVPGATGNFIVGAGALAANTYYIGGTTTISGLANLVTGTTINVVGGTATLSGNSGSTLLGALNGSTVNIEYGGTFNT GAALGSLLEGATVSFGSGGGTLVINGGGTAISLLASGPLSATTIQNYDPSRDTIELQDTVAPISGYTISGDTTRTITLYG SDGTQVATYTVNLASGVNLANGTYNAVNSTQGNPLNITYTTGNTYIGVCFLADSMIRTPSGDIAVQDIRVGDEILACPDG EWRDGEQGTGERLGTVVWTGKAHATVRPGLPDDEAGYPVRILRDAIADGVPYKDMLVTPEHCLFLDGVFIPARMLVNGRS IFHDRTITAYDYYHIETERHSVIIADGMPTESYLDTGNRRSFRQDGKIVHIGAGNARSWTEDAAAPLGVTRAVVEPVFRR IEARARDAGIASAIVGPVLTDDTGLHLLTENGQAIRRTRDANGYATFLIPPDVGTVRIVSRTSRPSDAIGPFLDDRRRLG VLVGGITLLDSDNMRLIDTYLADPALDGWDVQEAGPHRWTNGDAILPLGPRRPDSFGILAIQVLAGGPYPVTAEATEAVA QSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67162; Mature: 67030
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTTYKTASGVTYTVTDTSYLGQNDYDVTITASDGTVLLDQDNINRGIDILGVIDLAA CCCCEEEEECCCCEEEEECCHHCCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEEEECC SGDVITGSTDSTSLVSLASIGTYVSVPGATGNFIVGAGALAANTYYIGGTTTISGLANLV CCCEEECCCCCCCEEEHHHCCCEEECCCCCCCEEEECCEEEECEEEECCCHHHHHHHHHH TGTTINVVGGTATLSGNSGSTLLGALNGSTVNIEYGGTFNTGAALGSLLEGATVSFGSGG CCCEEEEEECEEEECCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCC GTLVINGGGTAISLLASGPLSATTIQNYDPSRDTIELQDTVAPISGYTISGDTTRTITLY CEEEEECCCCEEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCEEECCCCEEEEEEE GSDGTQVATYTVNLASGVNLANGTYNAVNSTQGNPLNITYTTGNTYIGVCFLADSMIRTP CCCCCEEEEEEEEECCCCEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECHHHCCC SGDIAVQDIRVGDEILACPDGEWRDGEQGTGERLGTVVWTGKAHATVRPGLPDDEAGYPV CCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCH RILRDAIADGVPYKDMLVTPEHCLFLDGVFIPARMLVNGRSIFHDRTITAYDYYHIETER HHHHHHHHCCCCCHHEEECCCCEEEECCHHCCEEEEECCCEEEECCEEEEEEEEEEEECC HSVIIADGMPTESYLDTGNRRSFRQDGKIVHIGAGNARSWTEDAAAPLGVTRAVVEPVFR CEEEEECCCCCHHHHCCCCCCCHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHH RIEARARDAGIASAIVGPVLTDDTGLHLLTENGQAIRRTRDANGYATFLIPPDVGTVRIV HHHHHHHCCCHHHHHHCCEEECCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEE SRTSRPSDAIGPFLDDRRRLGVLVGGITLLDSDNMRLIDTYLADPALDGWDVQEAGPHRW EECCCCCHHCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEE TNGDAILPLGPRRPDSFGILAIQVLAGGPYPVTAEATEAVAQSA CCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCC >Mature Secondary Structure STTTTYKTASGVTYTVTDTSYLGQNDYDVTITASDGTVLLDQDNINRGIDILGVIDLAA CCCEEEEECCCCEEEEECCHHCCCCCCEEEEEECCCEEEEECCCCCCCEEEEEEEEECC SGDVITGSTDSTSLVSLASIGTYVSVPGATGNFIVGAGALAANTYYIGGTTTISGLANLV CCCEEECCCCCCCEEEHHHCCCEEECCCCCCCEEEECCEEEECEEEECCCHHHHHHHHHH TGTTINVVGGTATLSGNSGSTLLGALNGSTVNIEYGGTFNTGAALGSLLEGATVSFGSGG CCCEEEEEECEEEECCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCC GTLVINGGGTAISLLASGPLSATTIQNYDPSRDTIELQDTVAPISGYTISGDTTRTITLY CEEEEECCCCEEEEEECCCCCEEEECCCCCCCCEEEEECCCCCCCCEEECCCCEEEEEEE GSDGTQVATYTVNLASGVNLANGTYNAVNSTQGNPLNITYTTGNTYIGVCFLADSMIRTP CCCCCEEEEEEEEECCCCEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECHHHCCC SGDIAVQDIRVGDEILACPDGEWRDGEQGTGERLGTVVWTGKAHATVRPGLPDDEAGYPV CCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCH RILRDAIADGVPYKDMLVTPEHCLFLDGVFIPARMLVNGRSIFHDRTITAYDYYHIETER HHHHHHHHCCCCCHHEEECCCCEEEECCHHCCEEEEECCCEEEECCEEEEEEEEEEEECC HSVIIADGMPTESYLDTGNRRSFRQDGKIVHIGAGNARSWTEDAAAPLGVTRAVVEPVFR CEEEEECCCCCHHHHCCCCCCCHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHH RIEARARDAGIASAIVGPVLTDDTGLHLLTENGQAIRRTRDANGYATFLIPPDVGTVRIV HHHHHHHCCCHHHHHHCCEEECCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEE SRTSRPSDAIGPFLDDRRRLGVLVGGITLLDSDNMRLIDTYLADPALDGWDVQEAGPHRW EECCCCCHHCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEE TNGDAILPLGPRRPDSFGILAIQVLAGGPYPVTAEATEAVAQSA CCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA