| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162147869
Identifier: 162147869
GI number: 162147869
Start: 2132874
End: 2134373
Strand: Direct
Name: 162147869
Synonym: GDI_2085
Alternate gene names: NA
Gene position: 2132874-2134373 (Clockwise)
Preceding gene: 162147864
Following gene: 162147870
Centisome position: 54.08
GC content: 71.13
Gene sequence:
>1500_bases ATGCCCCAGCACGCCTACACGGACCTGACGACCCATTTTGCGCGCATCGGCCGTATCCGCAACGCCCTGGGAATCCTGGG CTGGGACAAGGATGTGATGATGCCGGCCGGCGCCGCCGAAAGCCGGGCCGACAGCATCGCGACCCTGGACGTGCTGTGCC ACGAAATCCTGACCGCCCCTGTGATCGCGGAACTGCTGGACCGGGCGGAGGCACCTGCCGGATCGTGGCAGGCGGCGAAC CTGCAGGAAATGCGGCGGGCCTACCTGCACGCCGCGTCCGTGCCCGCCGATCTGGTCGATGCCATGTCCCGCGCCGCGTC GCGCTGCGAGATGGCCTGGCGCGCCGCACGCCGCGAGGGTGACTTCGCGGCGCTGCTGCCGACCCTGTCCGAGGTGCTGG ACCGCACGCGCGACCTGGCGGTGGTCAAGGGCGCGGCGCTGGGCCTGTCGCCCTATGACGCGCTGCTGGACCAGTACGAT CCGGGCACCCGCCGCGCGGACATCGACCCGGTCTTCGCCGAACTGCGCCGCGACCTGCCCGCCCTGATCGCGGACGCCCA GGCGCACCAGGCCGCGACCCCGGCGCCGGTCCTGCCCACGGGCCCCTTCCCCGTTCCCCTTCAGGAGCAGATGGGGCGGC GGATGATGATGGCGCTGGGCTTCGACATGGAACGCGGACGGCTGGATGTCAGTGCGCATCCGTTCTGCGGCGGGGCCGAG GACGACGTGCGAATCACCACCCGGTACGAGGACGACGATTTCCTGGCGGCCCTGATGGGCGTGATCCACGAGACCGGGCA CGCGCTGTACGAGCAGGGCCTGCCGCATGACTGGCGGACGCAGCCGGTGGGCCAGGCGCGCGGCATGAGCCTGCATGAAA GCCAGTCGCTGCTGATGGAAATGCAGGTCGCGCGATCGCGCCCCTTCATGGACTGGGCGGCGCCGCTGCTGCGCGCGGCC TTCGGCGGGGCGGAGGCCGACCCGGCCTGGTCGGCCGACAGCCTGTATCGCGCCGTGACGCGGGTACGCCCCGGCTTCAT CCGCGTCGATGCCGACGAGGTCACCTATCCCGCCCACGTCCTGGTCCGGTACGAGATGGAAACGGCCCTGGTCGACGGCA CGCTCGCGCTGCGCGACCTGCCCGAAGCGTTCAATGCCGGCATCCATGGCCTGCTGGGCCTGACGGTGCCGAACGACCGG CTGGGTTGCCTGCAGGACATCCACTGGCCCTCCGGCGCGTGGGGCTATTTTCCCACCTACACGATGGGCGCCATCCTGGC CGCGCAACTGCGCCAGGCCGCGTTCCGTGCCGACCCCGCCATTCCGTCCGGCATCGCGCAGGGCGATTTCGCCCCGCTGC TGGGCTGGCTGCGCACGCATGTCCACAGCCAGGCCAGCCGCCTGTCCACCCCCGACATCATCCGCGCCGCAACGGGTGCC GCGCCGTCGACCGATGCCTACCGGGCGCATCTGCGCGAACGCTATTGCGGCGCGGAATAG
Upstream 100 bases:
>100_bases CCTGCCGTTTGTCCATCCCCTGCCCCCGGTTGCCATCGCGCCGTGCCATCGCCCACACTGGCGCCCGCAGTGCCACACCC GACTGGCCGAGGACGACATC
Downstream 100 bases:
>100_bases GACCGGCCGTCCCGCACATACCTTGTGACGTTAGCACTTTTTTCACATCGGCATGGGACCGTCGACATCCTTGAAGTCCG AAACCGGAACAAGAGAGGAG
Product: thermostable carboxypeptidase 1
Products: NA
Alternate protein names: Carboxypeptidase Taq [H]
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MPQHAYTDLTTHFARIGRIRNALGILGWDKDVMMPAGAAESRADSIATLDVLCHEILTAPVIAELLDRAEAPAGSWQAAN LQEMRRAYLHAASVPADLVDAMSRAASRCEMAWRAARREGDFAALLPTLSEVLDRTRDLAVVKGAALGLSPYDALLDQYD PGTRRADIDPVFAELRRDLPALIADAQAHQAATPAPVLPTGPFPVPLQEQMGRRMMMALGFDMERGRLDVSAHPFCGGAE DDVRITTRYEDDDFLAALMGVIHETGHALYEQGLPHDWRTQPVGQARGMSLHESQSLLMEMQVARSRPFMDWAAPLLRAA FGGAEADPAWSADSLYRAVTRVRPGFIRVDADEVTYPAHVLVRYEMETALVDGTLALRDLPEAFNAGIHGLLGLTVPNDR LGCLQDIHWPSGAWGYFPTYTMGAILAAQLRQAAFRADPAIPSGIAQGDFAPLLGWLRTHVHSQASRLSTPDIIRAATGA APSTDAYRAHLRERYCGAE
Sequences:
>Translated_499_residues MPQHAYTDLTTHFARIGRIRNALGILGWDKDVMMPAGAAESRADSIATLDVLCHEILTAPVIAELLDRAEAPAGSWQAAN LQEMRRAYLHAASVPADLVDAMSRAASRCEMAWRAARREGDFAALLPTLSEVLDRTRDLAVVKGAALGLSPYDALLDQYD PGTRRADIDPVFAELRRDLPALIADAQAHQAATPAPVLPTGPFPVPLQEQMGRRMMMALGFDMERGRLDVSAHPFCGGAE DDVRITTRYEDDDFLAALMGVIHETGHALYEQGLPHDWRTQPVGQARGMSLHESQSLLMEMQVARSRPFMDWAAPLLRAA FGGAEADPAWSADSLYRAVTRVRPGFIRVDADEVTYPAHVLVRYEMETALVDGTLALRDLPEAFNAGIHGLLGLTVPNDR LGCLQDIHWPSGAWGYFPTYTMGAILAAQLRQAAFRADPAIPSGIAQGDFAPLLGWLRTHVHSQASRLSTPDIIRAATGA APSTDAYRAHLRERYCGAE >Mature_498_residues PQHAYTDLTTHFARIGRIRNALGILGWDKDVMMPAGAAESRADSIATLDVLCHEILTAPVIAELLDRAEAPAGSWQAANL QEMRRAYLHAASVPADLVDAMSRAASRCEMAWRAARREGDFAALLPTLSEVLDRTRDLAVVKGAALGLSPYDALLDQYDP GTRRADIDPVFAELRRDLPALIADAQAHQAATPAPVLPTGPFPVPLQEQMGRRMMMALGFDMERGRLDVSAHPFCGGAED DVRITTRYEDDDFLAALMGVIHETGHALYEQGLPHDWRTQPVGQARGMSLHESQSLLMEMQVARSRPFMDWAAPLLRAAF GGAEADPAWSADSLYRAVTRVRPGFIRVDADEVTYPAHVLVRYEMETALVDGTLALRDLPEAFNAGIHGLLGLTVPNDRL GCLQDIHWPSGAWGYFPTYTMGAILAAQLRQAAFRADPAIPSGIAQGDFAPLLGWLRTHVHSQASRLSTPDIIRAATGAA PSTDAYRAHLRERYCGAE
Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: =3.4.17.19 [H]
Molecular weight: Translated: 54424; Mature: 54293
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQHAYTDLTTHFARIGRIRNALGILGWDKDVMMPAGAAESRADSIATLDVLCHEILTAP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VIAELLDRAEAPAGSWQAANLQEMRRAYLHAASVPADLVDAMSRAASRCEMAWRAARREG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC DFAALLPTLSEVLDRTRDLAVVKGAALGLSPYDALLDQYDPGTRRADIDPVFAELRRDLP CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ALIADAQAHQAATPAPVLPTGPFPVPLQEQMGRRMMMALGFDMERGRLDVSAHPFCGGAE HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCC DDVRITTRYEDDDFLAALMGVIHETGHALYEQGLPHDWRTQPVGQARGMSLHESQSLLME CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHH MQVARSRPFMDWAAPLLRAAFGGAEADPAWSADSLYRAVTRVRPGFIRVDADEVTYPAHV HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEE LVRYEMETALVDGTLALRDLPEAFNAGIHGLLGLTVPNDRLGCLQDIHWPSGAWGYFPTY EEEEEHHHHHHCCHHHHHHCHHHHCCCCHHHEEECCCCCCHHHHHHCCCCCCCCCCCHHH TMGAILAAQLRQAAFRADPAIPSGIAQGDFAPLLGWLRTHVHSQASRLSTPDIIRAATGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC APSTDAYRAHLRERYCGAE CCCHHHHHHHHHHHHCCCC >Mature Secondary Structure PQHAYTDLTTHFARIGRIRNALGILGWDKDVMMPAGAAESRADSIATLDVLCHEILTAP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VIAELLDRAEAPAGSWQAANLQEMRRAYLHAASVPADLVDAMSRAASRCEMAWRAARREG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC DFAALLPTLSEVLDRTRDLAVVKGAALGLSPYDALLDQYDPGTRRADIDPVFAELRRDLP CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ALIADAQAHQAATPAPVLPTGPFPVPLQEQMGRRMMMALGFDMERGRLDVSAHPFCGGAE HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCC DDVRITTRYEDDDFLAALMGVIHETGHALYEQGLPHDWRTQPVGQARGMSLHESQSLLME CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHH MQVARSRPFMDWAAPLLRAAFGGAEADPAWSADSLYRAVTRVRPGFIRVDADEVTYPAHV HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEE LVRYEMETALVDGTLALRDLPEAFNAGIHGLLGLTVPNDRLGCLQDIHWPSGAWGYFPTY EEEEEHHHHHHCCHHHHHHCHHHHCCCCHHHEEECCCCCCHHHHHHCCCCCCCCCCCHHH TMGAILAAQLRQAAFRADPAIPSGIAQGDFAPLLGWLRTHVHSQASRLSTPDIIRAATGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC APSTDAYRAHLRERYCGAE CCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765282; 1369078 [H]