Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is 162147869

Identifier: 162147869

GI number: 162147869

Start: 2132874

End: 2134373

Strand: Direct

Name: 162147869

Synonym: GDI_2085

Alternate gene names: NA

Gene position: 2132874-2134373 (Clockwise)

Preceding gene: 162147864

Following gene: 162147870

Centisome position: 54.08

GC content: 71.13

Gene sequence:

>1500_bases
ATGCCCCAGCACGCCTACACGGACCTGACGACCCATTTTGCGCGCATCGGCCGTATCCGCAACGCCCTGGGAATCCTGGG
CTGGGACAAGGATGTGATGATGCCGGCCGGCGCCGCCGAAAGCCGGGCCGACAGCATCGCGACCCTGGACGTGCTGTGCC
ACGAAATCCTGACCGCCCCTGTGATCGCGGAACTGCTGGACCGGGCGGAGGCACCTGCCGGATCGTGGCAGGCGGCGAAC
CTGCAGGAAATGCGGCGGGCCTACCTGCACGCCGCGTCCGTGCCCGCCGATCTGGTCGATGCCATGTCCCGCGCCGCGTC
GCGCTGCGAGATGGCCTGGCGCGCCGCACGCCGCGAGGGTGACTTCGCGGCGCTGCTGCCGACCCTGTCCGAGGTGCTGG
ACCGCACGCGCGACCTGGCGGTGGTCAAGGGCGCGGCGCTGGGCCTGTCGCCCTATGACGCGCTGCTGGACCAGTACGAT
CCGGGCACCCGCCGCGCGGACATCGACCCGGTCTTCGCCGAACTGCGCCGCGACCTGCCCGCCCTGATCGCGGACGCCCA
GGCGCACCAGGCCGCGACCCCGGCGCCGGTCCTGCCCACGGGCCCCTTCCCCGTTCCCCTTCAGGAGCAGATGGGGCGGC
GGATGATGATGGCGCTGGGCTTCGACATGGAACGCGGACGGCTGGATGTCAGTGCGCATCCGTTCTGCGGCGGGGCCGAG
GACGACGTGCGAATCACCACCCGGTACGAGGACGACGATTTCCTGGCGGCCCTGATGGGCGTGATCCACGAGACCGGGCA
CGCGCTGTACGAGCAGGGCCTGCCGCATGACTGGCGGACGCAGCCGGTGGGCCAGGCGCGCGGCATGAGCCTGCATGAAA
GCCAGTCGCTGCTGATGGAAATGCAGGTCGCGCGATCGCGCCCCTTCATGGACTGGGCGGCGCCGCTGCTGCGCGCGGCC
TTCGGCGGGGCGGAGGCCGACCCGGCCTGGTCGGCCGACAGCCTGTATCGCGCCGTGACGCGGGTACGCCCCGGCTTCAT
CCGCGTCGATGCCGACGAGGTCACCTATCCCGCCCACGTCCTGGTCCGGTACGAGATGGAAACGGCCCTGGTCGACGGCA
CGCTCGCGCTGCGCGACCTGCCCGAAGCGTTCAATGCCGGCATCCATGGCCTGCTGGGCCTGACGGTGCCGAACGACCGG
CTGGGTTGCCTGCAGGACATCCACTGGCCCTCCGGCGCGTGGGGCTATTTTCCCACCTACACGATGGGCGCCATCCTGGC
CGCGCAACTGCGCCAGGCCGCGTTCCGTGCCGACCCCGCCATTCCGTCCGGCATCGCGCAGGGCGATTTCGCCCCGCTGC
TGGGCTGGCTGCGCACGCATGTCCACAGCCAGGCCAGCCGCCTGTCCACCCCCGACATCATCCGCGCCGCAACGGGTGCC
GCGCCGTCGACCGATGCCTACCGGGCGCATCTGCGCGAACGCTATTGCGGCGCGGAATAG

Upstream 100 bases:

>100_bases
CCTGCCGTTTGTCCATCCCCTGCCCCCGGTTGCCATCGCGCCGTGCCATCGCCCACACTGGCGCCCGCAGTGCCACACCC
GACTGGCCGAGGACGACATC

Downstream 100 bases:

>100_bases
GACCGGCCGTCCCGCACATACCTTGTGACGTTAGCACTTTTTTCACATCGGCATGGGACCGTCGACATCCTTGAAGTCCG
AAACCGGAACAAGAGAGGAG

Product: thermostable carboxypeptidase 1

Products: NA

Alternate protein names: Carboxypeptidase Taq [H]

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MPQHAYTDLTTHFARIGRIRNALGILGWDKDVMMPAGAAESRADSIATLDVLCHEILTAPVIAELLDRAEAPAGSWQAAN
LQEMRRAYLHAASVPADLVDAMSRAASRCEMAWRAARREGDFAALLPTLSEVLDRTRDLAVVKGAALGLSPYDALLDQYD
PGTRRADIDPVFAELRRDLPALIADAQAHQAATPAPVLPTGPFPVPLQEQMGRRMMMALGFDMERGRLDVSAHPFCGGAE
DDVRITTRYEDDDFLAALMGVIHETGHALYEQGLPHDWRTQPVGQARGMSLHESQSLLMEMQVARSRPFMDWAAPLLRAA
FGGAEADPAWSADSLYRAVTRVRPGFIRVDADEVTYPAHVLVRYEMETALVDGTLALRDLPEAFNAGIHGLLGLTVPNDR
LGCLQDIHWPSGAWGYFPTYTMGAILAAQLRQAAFRADPAIPSGIAQGDFAPLLGWLRTHVHSQASRLSTPDIIRAATGA
APSTDAYRAHLRERYCGAE

Sequences:

>Translated_499_residues
MPQHAYTDLTTHFARIGRIRNALGILGWDKDVMMPAGAAESRADSIATLDVLCHEILTAPVIAELLDRAEAPAGSWQAAN
LQEMRRAYLHAASVPADLVDAMSRAASRCEMAWRAARREGDFAALLPTLSEVLDRTRDLAVVKGAALGLSPYDALLDQYD
PGTRRADIDPVFAELRRDLPALIADAQAHQAATPAPVLPTGPFPVPLQEQMGRRMMMALGFDMERGRLDVSAHPFCGGAE
DDVRITTRYEDDDFLAALMGVIHETGHALYEQGLPHDWRTQPVGQARGMSLHESQSLLMEMQVARSRPFMDWAAPLLRAA
FGGAEADPAWSADSLYRAVTRVRPGFIRVDADEVTYPAHVLVRYEMETALVDGTLALRDLPEAFNAGIHGLLGLTVPNDR
LGCLQDIHWPSGAWGYFPTYTMGAILAAQLRQAAFRADPAIPSGIAQGDFAPLLGWLRTHVHSQASRLSTPDIIRAATGA
APSTDAYRAHLRERYCGAE
>Mature_498_residues
PQHAYTDLTTHFARIGRIRNALGILGWDKDVMMPAGAAESRADSIATLDVLCHEILTAPVIAELLDRAEAPAGSWQAANL
QEMRRAYLHAASVPADLVDAMSRAASRCEMAWRAARREGDFAALLPTLSEVLDRTRDLAVVKGAALGLSPYDALLDQYDP
GTRRADIDPVFAELRRDLPALIADAQAHQAATPAPVLPTGPFPVPLQEQMGRRMMMALGFDMERGRLDVSAHPFCGGAED
DVRITTRYEDDDFLAALMGVIHETGHALYEQGLPHDWRTQPVGQARGMSLHESQSLLMEMQVARSRPFMDWAAPLLRAAF
GGAEADPAWSADSLYRAVTRVRPGFIRVDADEVTYPAHVLVRYEMETALVDGTLALRDLPEAFNAGIHGLLGLTVPNDRL
GCLQDIHWPSGAWGYFPTYTMGAILAAQLRQAAFRADPAIPSGIAQGDFAPLLGWLRTHVHSQASRLSTPDIIRAATGAA
PSTDAYRAHLRERYCGAE

Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]

COG id: COG2317

COG function: function code E; Zn-dependent carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001333 [H]

Pfam domain/function: PF02074 Peptidase_M32 [H]

EC number: =3.4.17.19 [H]

Molecular weight: Translated: 54424; Mature: 54293

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQHAYTDLTTHFARIGRIRNALGILGWDKDVMMPAGAAESRADSIATLDVLCHEILTAP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VIAELLDRAEAPAGSWQAANLQEMRRAYLHAASVPADLVDAMSRAASRCEMAWRAARREG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
DFAALLPTLSEVLDRTRDLAVVKGAALGLSPYDALLDQYDPGTRRADIDPVFAELRRDLP
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
ALIADAQAHQAATPAPVLPTGPFPVPLQEQMGRRMMMALGFDMERGRLDVSAHPFCGGAE
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCC
DDVRITTRYEDDDFLAALMGVIHETGHALYEQGLPHDWRTQPVGQARGMSLHESQSLLME
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHH
MQVARSRPFMDWAAPLLRAAFGGAEADPAWSADSLYRAVTRVRPGFIRVDADEVTYPAHV
HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEE
LVRYEMETALVDGTLALRDLPEAFNAGIHGLLGLTVPNDRLGCLQDIHWPSGAWGYFPTY
EEEEEHHHHHHCCHHHHHHCHHHHCCCCHHHEEECCCCCCHHHHHHCCCCCCCCCCCHHH
TMGAILAAQLRQAAFRADPAIPSGIAQGDFAPLLGWLRTHVHSQASRLSTPDIIRAATGA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
APSTDAYRAHLRERYCGAE
CCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PQHAYTDLTTHFARIGRIRNALGILGWDKDVMMPAGAAESRADSIATLDVLCHEILTAP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VIAELLDRAEAPAGSWQAANLQEMRRAYLHAASVPADLVDAMSRAASRCEMAWRAARREG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
DFAALLPTLSEVLDRTRDLAVVKGAALGLSPYDALLDQYDPGTRRADIDPVFAELRRDLP
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
ALIADAQAHQAATPAPVLPTGPFPVPLQEQMGRRMMMALGFDMERGRLDVSAHPFCGGAE
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCC
DDVRITTRYEDDDFLAALMGVIHETGHALYEQGLPHDWRTQPVGQARGMSLHESQSLLME
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHH
MQVARSRPFMDWAAPLLRAAFGGAEADPAWSADSLYRAVTRVRPGFIRVDADEVTYPAHV
HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEE
LVRYEMETALVDGTLALRDLPEAFNAGIHGLLGLTVPNDRLGCLQDIHWPSGAWGYFPTY
EEEEEHHHHHHCCHHHHHHCHHHHCCCCHHHEEECCCCCCHHHHHHCCCCCCCCCCCHHH
TMGAILAAQLRQAAFRADPAIPSGIAQGDFAPLLGWLRTHVHSQASRLSTPDIIRAATGA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
APSTDAYRAHLRERYCGAE
CCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7765282; 1369078 [H]