Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is fdxA

Identifier: 162147815

GI number: 162147815

Start: 2075058

End: 2075390

Strand: Direct

Name: fdxA

Synonym: GDI_2031

Alternate gene names: NA

Gene position: 2075058-2075390 (Clockwise)

Preceding gene: 162147814

Following gene: 162147823

Centisome position: 52.61

GC content: 61.56

Gene sequence:

>333_bases
ATGACCTACGTGGTCACCGAAAACTGCATCCGCTGCAAATTCATGGACTGTGTCGAGGTGTGCCCGGTCGACTGCTTCTA
TGCCGGCGAAAATTTCCTGGTCATCAACCCCGATGAGTGCATCGATTGCGGCGTGTGTGAGCCTGAATGCCCGGCGGAAG
CCATCGTCCCCGACAGCGACGACCGCGCCGCGGCCTGGGCCGAGATCAACGCATCCTATTCCGCCAAATGGCCCAACATC
ACCCGCAAGGGTACCGCCCCGGCCGATGCCGAGGAATGGAAGGACAAGCCGGGCAAGAAGGACCTGCTGTCCCCCGAGCC
GCACAAGGACTGA

Upstream 100 bases:

>100_bases
GTAGGCGAGGACCCGCAAACGGCCCCTCGCCGGCCCCAGGCTGGTCCGATGTCATCAACAGGCGATGCCATCCCCAGCAT
CAGATAATCGGAGACGAGCG

Downstream 100 bases:

>100_bases
GCAGAAGACGACACCCCGTCGGGATAATACCCGGCGGGGTACAGGGCCCGCCCCGGACACATGAAAAGGCCGGTGAGGAT
TTCTCCTCACCGGCCTTTTT

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin II; FdII [H]

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIVPDSDDRAAAWAEINASYSAKWPNI
TRKGTAPADAEEWKDKPGKKDLLSPEPHKD

Sequences:

>Translated_110_residues
MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIVPDSDDRAAAWAEINASYSAKWPNI
TRKGTAPADAEEWKDKPGKKDLLSPEPHKD
>Mature_109_residues
TYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIVPDSDDRAAAWAEINASYSAKWPNIT
RKGTAPADAEEWKDKPGKKDLLSPEPHKD

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470 [H]

EC number: NA

Molecular weight: Translated: 12203; Mature: 12072

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
8.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIVPDSD
CEEEECCCCEEEEECCHHHHCCCEEEECCCCEEEECCCCCEECCCCCCCCCCCCCCCCCC
DRAAAWAEINASYSAKWPNITRKGTAPADAEEWKDKPGKKDLLSPEPHKD
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TYVVTENCIRCKFMDCVEVCPVDCFYAGENFLVINPDECIDCGVCEPECPAEAIVPDSD
EEEECCCCEEEEECCHHHHCCCEEEECCCCEEEECCCCCEECCCCCCCCCCCCCCCCCC
DRAAAWAEINASYSAKWPNITRKGTAPADAEEWKDKPGKKDLLSPEPHKD
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA