Click here to switch to the map view.

The map label for this gene is xdhC [C]

Identifier: 162147785

GI number: 162147785

Start: 2036541

End: 2037404

Strand: Reverse

Name: xdhC [C]

Synonym: GDI_2001

Alternate gene names: 162147785

Gene position: 2037404-2036541 (Counterclockwise)

Preceding gene: 162147786

Following gene: 162147784

Centisome position: 51.66

GC content: 71.88

Gene sequence:

>864_bases
ATGGACGAGATCCTGGCCGCGCTTGATCTCTGGCGGCCCGCCGGGCAGCCCATCGCCCGGATCGCGATCCGCGCCGCCCG
CGGGTCCACCCCGCGCGAGGCCGGGTCGTTCATGCTGGTCACACCGGACGCGCAGGCCGGGACCATCGGCGGCGGCCATC
TGGAATGGGACAGCGTGATCCGGGCGCGGGCCCTGCTGGCCGGACAGGGTCAGGCCGGGGAACATGACGTGCCGCTCGGC
CCCGAAATCGGCCAGTGCTGCGGCGGCGTGGTGCGGGTGCGGATCGAACGCGCGGACGACGCGCTGCTGGATGCGCTGGT
GCGCGACGGGCTGGCCGCGCGCGCGGCGCGGCCGGTGCTGCTGCTGTTCGGCGCGGGGCATGTCGGGCGGGCGCTGGCCC
GCGCGCTGGCCCCCCTGCCGCTGCGCCTGGTCTGGATCGATCCGCGTGCCGCCGAATTCGGCACGGTCCCCGATAGTGTC
GAAATCCGCGTCACCGCCGACTGGGAAAGCGCCATTGCCGCCGCCCCGCCCGGCGCCGGCGCCCTGGTGCTGACGCCCAG
CCACGCGCTGGATGCGCTGATCGTCGGCGCGGCGCTGGAACGGGGTGATTTCCGGTATGTCGGACTGATCGGGTCGAAGA
CCAAGCGGCGGCGGTTCGAGGCCGGTTTTCGCAGCCTGGGCCTGGGCGAGGACCGCATCGAGACCCTGGTCTGCCCGATC
GGCGATCGCGGCATCCGCGACAAGCGCCCCGAAATCATCGCCGCCCTGGTCGCCGCCGAAATTGTGGAACGATTGTTGCA
TGACAATGCCGGAATGGAAGAGAGCAACGGGGCGGAAGGGATCGGCATGAGGCATACGGCATGA

Upstream 100 bases:

>100_bases
CCGGCTGGACGCGCCCGCGACGCCCGAGACGATCCTGCGCACGGCGGAGCGGATGCGCGGCCTTGCGGCAACCCGTCCCG
TCGGCTGAGCGGGTCTCGCG

Downstream 100 bases:

>100_bases
GGGCATCGGGCCGGACCGCGCATATGTTGCGGCTGCATGCGCGCTGCATCGTGTATTTCAACGCGGTGCGCGATTTCGGG
TCGATCCGCGAGGCCGCGCG

Product: xanthine dehydrogenase chaperone

Products: NA

Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Cofactor Insertion; Xanthine Dehydrogenase Accessory Protein; XdhC Protein; Xanthine And CO Dehydrogenases Maturation Factor; Xanthine Dehydrogenase; Xanthine Dehydrogenase Accessory Protein Xdhc; Dehydrogenase; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Xdh C Protein; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Xanthine Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Protein C Subunit

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MDEILAALDLWRPAGQPIARIAIRAARGSTPREAGSFMLVTPDAQAGTIGGGHLEWDSVIRARALLAGQGQAGEHDVPLG
PEIGQCCGGVVRVRIERADDALLDALVRDGLAARAARPVLLLFGAGHVGRALARALAPLPLRLVWIDPRAAEFGTVPDSV
EIRVTADWESAIAAAPPGAGALVLTPSHALDALIVGAALERGDFRYVGLIGSKTKRRRFEAGFRSLGLGEDRIETLVCPI
GDRGIRDKRPEIIAALVAAEIVERLLHDNAGMEESNGAEGIGMRHTA

Sequences:

>Translated_287_residues
MDEILAALDLWRPAGQPIARIAIRAARGSTPREAGSFMLVTPDAQAGTIGGGHLEWDSVIRARALLAGQGQAGEHDVPLG
PEIGQCCGGVVRVRIERADDALLDALVRDGLAARAARPVLLLFGAGHVGRALARALAPLPLRLVWIDPRAAEFGTVPDSV
EIRVTADWESAIAAAPPGAGALVLTPSHALDALIVGAALERGDFRYVGLIGSKTKRRRFEAGFRSLGLGEDRIETLVCPI
GDRGIRDKRPEIIAALVAAEIVERLLHDNAGMEESNGAEGIGMRHTA
>Mature_287_residues
MDEILAALDLWRPAGQPIARIAIRAARGSTPREAGSFMLVTPDAQAGTIGGGHLEWDSVIRARALLAGQGQAGEHDVPLG
PEIGQCCGGVVRVRIERADDALLDALVRDGLAARAARPVLLLFGAGHVGRALARALAPLPLRLVWIDPRAAEFGTVPDSV
EIRVTADWESAIAAAPPGAGALVLTPSHALDALIVGAALERGDFRYVGLIGSKTKRRRFEAGFRSLGLGEDRIETLVCPI
GDRGIRDKRPEIIAALVAAEIVERLLHDNAGMEESNGAEGIGMRHTA

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=266, Percent_Identity=26.6917293233083, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30226; Mature: 30226

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEILAALDLWRPAGQPIARIAIRAARGSTPREAGSFMLVTPDAQAGTIGGGHLEWDSVI
CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCCCCCCCCCHHHHH
RARALLAGQGQAGEHDVPLGPEIGQCCGGVVRVRIERADDALLDALVRDGLAARAARPVL
HHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEEEEEECHHHHHHHHHHHCCHHHHHCCCEE
LLFGAGHVGRALARALAPLPLRLVWIDPRAAEFGTVPDSVEIRVTADWESAIAAAPPGAG
EEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCCC
ALVLTPSHALDALIVGAALERGDFRYVGLIGSKTKRRRFEAGFRSLGLGEDRIETLVCPI
EEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHEEECCC
GDRGIRDKRPEIIAALVAAEIVERLLHDNAGMEESNGAEGIGMRHTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDEILAALDLWRPAGQPIARIAIRAARGSTPREAGSFMLVTPDAQAGTIGGGHLEWDSVI
CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCEEEECCCCCCCCCCCCCCCHHHHH
RARALLAGQGQAGEHDVPLGPEIGQCCGGVVRVRIERADDALLDALVRDGLAARAARPVL
HHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEEEEEECHHHHHHHHHHHCCHHHHHCCCEE
LLFGAGHVGRALARALAPLPLRLVWIDPRAAEFGTVPDSVEIRVTADWESAIAAAPPGAG
EEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCCC
ALVLTPSHALDALIVGAALERGDFRYVGLIGSKTKRRRFEAGFRSLGLGEDRIETLVCPI
EEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHEEECCC
GDRGIRDKRPEIIAALVAAEIVERLLHDNAGMEESNGAEGIGMRHTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA