| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is metG [H]
Identifier: 162147584
GI number: 162147584
Start: 1831285
End: 1832823
Strand: Direct
Name: metG [H]
Synonym: GDI_1800
Alternate gene names: 162147584
Gene position: 1831285-1832823 (Clockwise)
Preceding gene: 162147583
Following gene: 162147585
Centisome position: 46.43
GC content: 67.77
Gene sequence:
>1539_bases ATGACCCGGCGCTATTACGTCACGACACCGATCTATTATGTGAACGGGGCGCCCCATATCGGCCACGCCTATACATCGGT CGCCGCCGACATCGTGGCGCGGTTCAAGCGGCTGGCGGGTTTCGACGTCTTCTTCCTGACCGGCACGGACGAACACGGCC AGAAGGTGGAACAGGCCGCCCAGGCGGCGGGCCTGGCCCCGATCGCGTTCGCGGACCGCGTTTCAGCCGATTTCCGCGCG ATGTACGACGTGATGAACGTCTCGTACGACGATTTCATCCGCACCACCGAACCGCGTCACATCGCCGGCGCCACGGCCCT GTGGGAGAGGATCGCGGCGAACGGCCATATCTACCTGGGTGCGTACGAGGGCTGGTACGCCCTGCGCGACGAAAGCTTCT ATAACGAGGACGAACTGGTTACCCAGCCCGACGGCACCCGGGTCGCGCCGACCGGCGCCCCGGTCGAATGGGTCCGCGAG CCGTCCTATTTCTTCCGCCTGTCCGCCTTCGCCGACCGGCTGCTGGACCTGTACGAAACCCGCCCGGGCTTCGTGGAGCC CGCGTCGCGGCGCAACGAGGTCGCAAGCTTCGTCCGCCAGGGCCTGCGCGACCTGTCGATCAGCCGCACCAGCTTCCGCT GGGGCATTCCGGTGCCCGGCGATGCCGATCACGTGATGTATGTCTGGGTCGACGCGCTGGCCAACTACCTGTCCGCGATC GGCTTTCCCGACGCCCGCAACCCGCGCGCGGGCTTCTGGCCGGCGAACCTGCACCTGGTGGGCAAGGACATCGTCCGCTT CCACGCCATCTACTGGCCGGCGCTGCTGATGGCGGCGGGTCTGGACCTGCCGGACTGCGTCTTCTCGCACGGATGGTGGA CCATCGAGGGCGAGAAGATGAGCAAGTCGCTGGGCAATGTCGTCGATCCGCGCGACCTGGTGGCGGAATTCGGCCTGGAC CCGGTGCGCTTCTTCCTGATGCGCGAAATGCCCTTCGGCGGTGACAGCGACCTGAGCCGCAAGGCCATCATCAACCGGAT GAATGTCGAACTGGCCAACGACCTGGGCAACCTGGCGCAGCGCACGCTGTCGCAGGTGGCGCGCAATTGCGGCGGGCTGC TGCCGGAGCAGGGCACGCGGACCGACGACGACATCGCGCTGCTGGCGCAGGCCGACCTGCTGCCGACCCTGATGCACGAA CAGATCGACCGCCGCGCCCTGACCGACGCGCTGGAAGAGGTCTGGCGCGTCATCCGCGCCTGCAACGCCTATATCGACCG CCAGGCCCCGTGGGCGCTGAAGAAGACCGATCCCGACCGGATGGCGGTGGTGCTGCGCGTGCTGGTCGATGCCCTGCGCG GCATCGGCACCATGCTGCAGCCCTACATGCCCGGCAGCATGGATGCGCTGCTGACGCAGCTTGGCGTGGCGGAGGACGAG CGCGATTTCGCGTCCCTGGCCACGCCGCTGCCGGGCGGACGCGCCCTGCCGCCGCCGCAGGGGATCTTTCCCCGTTACGT GGAGGCCGAGGCGCAATGA
Upstream 100 bases:
>100_bases ATCTCTGGCGTCGTCTGGTCCATCTGCGGGCCGAGACGGAACAGTTCAATCTGGATAAACATCAGGCCATCCTGAGCGGC CTGACATTGGTGAGTGGAAT
Downstream 100 bases:
>100_bases CGGGACTGATCGATTCGCACTGCCATCTGGACCATTTCACGGATGACGAGATCCCGGACCTGCTGGACAGGGCGCGCCAG GCCGGGGTCGAAGGGATGGT
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MTRRYYVTTPIYYVNGAPHIGHAYTSVAADIVARFKRLAGFDVFFLTGTDEHGQKVEQAAQAAGLAPIAFADRVSADFRA MYDVMNVSYDDFIRTTEPRHIAGATALWERIAANGHIYLGAYEGWYALRDESFYNEDELVTQPDGTRVAPTGAPVEWVRE PSYFFRLSAFADRLLDLYETRPGFVEPASRRNEVASFVRQGLRDLSISRTSFRWGIPVPGDADHVMYVWVDALANYLSAI GFPDARNPRAGFWPANLHLVGKDIVRFHAIYWPALLMAAGLDLPDCVFSHGWWTIEGEKMSKSLGNVVDPRDLVAEFGLD PVRFFLMREMPFGGDSDLSRKAIINRMNVELANDLGNLAQRTLSQVARNCGGLLPEQGTRTDDDIALLAQADLLPTLMHE QIDRRALTDALEEVWRVIRACNAYIDRQAPWALKKTDPDRMAVVLRVLVDALRGIGTMLQPYMPGSMDALLTQLGVAEDE RDFASLATPLPGGRALPPPQGIFPRYVEAEAQ
Sequences:
>Translated_512_residues MTRRYYVTTPIYYVNGAPHIGHAYTSVAADIVARFKRLAGFDVFFLTGTDEHGQKVEQAAQAAGLAPIAFADRVSADFRA MYDVMNVSYDDFIRTTEPRHIAGATALWERIAANGHIYLGAYEGWYALRDESFYNEDELVTQPDGTRVAPTGAPVEWVRE PSYFFRLSAFADRLLDLYETRPGFVEPASRRNEVASFVRQGLRDLSISRTSFRWGIPVPGDADHVMYVWVDALANYLSAI GFPDARNPRAGFWPANLHLVGKDIVRFHAIYWPALLMAAGLDLPDCVFSHGWWTIEGEKMSKSLGNVVDPRDLVAEFGLD PVRFFLMREMPFGGDSDLSRKAIINRMNVELANDLGNLAQRTLSQVARNCGGLLPEQGTRTDDDIALLAQADLLPTLMHE QIDRRALTDALEEVWRVIRACNAYIDRQAPWALKKTDPDRMAVVLRVLVDALRGIGTMLQPYMPGSMDALLTQLGVAEDE RDFASLATPLPGGRALPPPQGIFPRYVEAEAQ >Mature_511_residues TRRYYVTTPIYYVNGAPHIGHAYTSVAADIVARFKRLAGFDVFFLTGTDEHGQKVEQAAQAAGLAPIAFADRVSADFRAM YDVMNVSYDDFIRTTEPRHIAGATALWERIAANGHIYLGAYEGWYALRDESFYNEDELVTQPDGTRVAPTGAPVEWVREP SYFFRLSAFADRLLDLYETRPGFVEPASRRNEVASFVRQGLRDLSISRTSFRWGIPVPGDADHVMYVWVDALANYLSAIG FPDARNPRAGFWPANLHLVGKDIVRFHAIYWPALLMAAGLDLPDCVFSHGWWTIEGEKMSKSLGNVVDPRDLVAEFGLDP VRFFLMREMPFGGDSDLSRKAIINRMNVELANDLGNLAQRTLSQVARNCGGLLPEQGTRTDDDIALLAQADLLPTLMHEQ IDRRALTDALEEVWRVIRACNAYIDRQAPWALKKTDPDRMAVVLRVLVDALRGIGTMLQPYMPGSMDALLTQLGVAEDER DFASLATPLPGGRALPPPQGIFPRYVEAEAQ
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=538, Percent_Identity=40.3345724907063, Blast_Score=382, Evalue=1e-106, Organism=Homo sapiens, GI14043022, Length=514, Percent_Identity=29.1828793774319, Blast_Score=162, Evalue=5e-40, Organism=Escherichia coli, GI1788432, Length=508, Percent_Identity=25.9842519685039, Blast_Score=174, Evalue=1e-44, Organism=Caenorhabditis elegans, GI212645096, Length=513, Percent_Identity=35.4775828460039, Blast_Score=332, Evalue=2e-91, Organism=Caenorhabditis elegans, GI71992781, Length=407, Percent_Identity=32.6781326781327, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17540794, Length=551, Percent_Identity=26.497277676951, Blast_Score=158, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6321610, Length=547, Percent_Identity=32.5411334552102, Blast_Score=306, Evalue=6e-84, Organism=Saccharomyces cerevisiae, GI6321704, Length=510, Percent_Identity=24.9019607843137, Blast_Score=118, Evalue=2e-27, Organism=Drosophila melanogaster, GI21358483, Length=503, Percent_Identity=38.3697813121272, Blast_Score=336, Evalue=2e-92, Organism=Drosophila melanogaster, GI24655311, Length=554, Percent_Identity=27.7978339350181, Blast_Score=161, Evalue=1e-39,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 57162; Mature: 57030
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRYYVTTPIYYVNGAPHIGHAYTSVAADIVARFKRLAGFDVFFLTGTDEHGQKVEQAA CCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH QAAGLAPIAFADRVSADFRAMYDVMNVSYDDFIRTTEPRHIAGATALWERIAANGHIYLG HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEE AYEGWYALRDESFYNEDELVTQPDGTRVAPTGAPVEWVREPSYFFRLSAFADRLLDLYET EECCEEEECCCCCCCCCCEEECCCCCEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHC RPGFVEPASRRNEVASFVRQGLRDLSISRTSFRWGIPVPGDADHVMYVWVDALANYLSAI CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHC GFPDARNPRAGFWPANLHLVGKDIVRFHAIYWPALLMAAGLDLPDCVFSHGWWTIEGEKM CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEHHHH SKSLGNVVDPRDLVAEFGLDPVRFFLMREMPFGGDSDLSRKAIINRMNVELANDLGNLAQ HHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RTLSQVARNCGGLLPEQGTRTDDDIALLAQADLLPTLMHEQIDRRALTDALEEVWRVIRA HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CNAYIDRQAPWALKKTDPDRMAVVLRVLVDALRGIGTMLQPYMPGSMDALLTQLGVAEDE HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCH RDFASLATPLPGGRALPPPQGIFPRYVEAEAQ HHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCC >Mature Secondary Structure TRRYYVTTPIYYVNGAPHIGHAYTSVAADIVARFKRLAGFDVFFLTGTDEHGQKVEQAA CCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH QAAGLAPIAFADRVSADFRAMYDVMNVSYDDFIRTTEPRHIAGATALWERIAANGHIYLG HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEE AYEGWYALRDESFYNEDELVTQPDGTRVAPTGAPVEWVREPSYFFRLSAFADRLLDLYET EECCEEEECCCCCCCCCCEEECCCCCEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHC RPGFVEPASRRNEVASFVRQGLRDLSISRTSFRWGIPVPGDADHVMYVWVDALANYLSAI CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHC GFPDARNPRAGFWPANLHLVGKDIVRFHAIYWPALLMAAGLDLPDCVFSHGWWTIEGEKM CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEHHHH SKSLGNVVDPRDLVAEFGLDPVRFFLMREMPFGGDSDLSRKAIINRMNVELANDLGNLAQ HHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RTLSQVARNCGGLLPEQGTRTDDDIALLAQADLLPTLMHEQIDRRALTDALEEVWRVIRA HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CNAYIDRQAPWALKKTDPDRMAVVLRVLVDALRGIGTMLQPYMPGSMDALLTQLGVAEDE HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCH RDFASLATPLPGGRALPPPQGIFPRYVEAEAQ HHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]