Click here to switch to the map view.

The map label for this gene is fliP [H]

Identifier: 162147465

GI number: 162147465

Start: 1705388

End: 1706167

Strand: Direct

Name: fliP [H]

Synonym: GDI_1681

Alternate gene names: 162147465

Gene position: 1705388-1706167 (Clockwise)

Preceding gene: 162147464

Following gene: 162147466

Centisome position: 43.24

GC content: 63.72

Gene sequence:

>780_bases
TTGACATCTCGGTCATCCACGGGGCGTGCCGCCAGGTTCGGTGCCGTCGTCATGTGCGTCGTAGCGGGTGCCGTGCTGGC
TGGCATGCCGACATTGGCCCACGCCCAGTCCCTGTCGCTGGATCTGGGGAAGGGGATGGGTGACGCGGGAACGACCAGCC
GCCTCGTCCAGTTGACGGCGCTGATCACGATTCTCTCGCTTGCGCCCAGCCTGCTGGTGATGGTGACCGCCTTCACGCGG
ATCATCGTCGTGCTGTCCCTGTTGCGTGGTGCGATCGGGGCGCAGGGGGCCCCTCCCAACACGGTACTGATCGGCCTGGC
GCTGTTCCTGACCTTCTTCGTCATGCAGCCTGTTTTCCAACAATCATGGGATCATGGCATCGTCCCCATGATGGATGGCC
GCGTCAGTGAAATGGAAGGCCTGACGGCCGCGGCAGAGCCGTTCCGGACGTTCATGCTGGCGAACGCGCGGCCGGCCGAC
ATCACGACGTTTCTGCATCTCGCAAACGTGCCGCCGCCGGCGACGCCTGCCGAGACGCCGTGGCGGGTGATCATGCCGGC
CTTCATGATCGGCGAACTCAGCCGCGGTTTCGAGATGGGATTCCTGCTCTACCTGCCGTTCCTGGTCATCGACATCGTCA
CGTCGAGCGTCCTCATGAGTCTCGGCATGATGATGCTCCCGCCTGCCACGATCTCCCTGCCGTTCAAGCTGATCTTCTTC
GTCATGGTGGATGGGTGGCAGATGGTGGCGGGGGGATTGGTCAGAAGCTTCGGGGGCTGA

Upstream 100 bases:

>100_bases
GGTTGGATGGATGGCGAGGACGGCCGGCCGCGACCGGTGGCGCCCTCGGCCAATTCCGCGAGCGATCCAGGCGAATGACG
TGAATACCGGAGCGAACGCG

Downstream 100 bases:

>100_bases
CCGAAGCGGCGACCGCCAAGGGTGATCCTGTTTCGTTACAGTATTGGTTTTTGGGAAGAATTCCTTCCCGAAGGCCGTCT
GGGGCTTGCCGGGCATCGGT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTSRSSTGRAARFGAVVMCVVAGAVLAGMPTLAHAQSLSLDLGKGMGDAGTTSRLVQLTALITILSLAPSLLVMVTAFTR
IIVVLSLLRGAIGAQGAPPNTVLIGLALFLTFFVMQPVFQQSWDHGIVPMMDGRVSEMEGLTAAAEPFRTFMLANARPAD
ITTFLHLANVPPPATPAETPWRVIMPAFMIGELSRGFEMGFLLYLPFLVIDIVTSSVLMSLGMMMLPPATISLPFKLIFF
VMVDGWQMVAGGLVRSFGG

Sequences:

>Translated_259_residues
MTSRSSTGRAARFGAVVMCVVAGAVLAGMPTLAHAQSLSLDLGKGMGDAGTTSRLVQLTALITILSLAPSLLVMVTAFTR
IIVVLSLLRGAIGAQGAPPNTVLIGLALFLTFFVMQPVFQQSWDHGIVPMMDGRVSEMEGLTAAAEPFRTFMLANARPAD
ITTFLHLANVPPPATPAETPWRVIMPAFMIGELSRGFEMGFLLYLPFLVIDIVTSSVLMSLGMMMLPPATISLPFKLIFF
VMVDGWQMVAGGLVRSFGG
>Mature_258_residues
TSRSSTGRAARFGAVVMCVVAGAVLAGMPTLAHAQSLSLDLGKGMGDAGTTSRLVQLTALITILSLAPSLLVMVTAFTRI
IVVLSLLRGAIGAQGAPPNTVLIGLALFLTFFVMQPVFQQSWDHGIVPMMDGRVSEMEGLTAAAEPFRTFMLANARPADI
TTFLHLANVPPPATPAETPWRVIMPAFMIGELSRGFEMGFLLYLPFLVIDIVTSSVLMSLGMMMLPPATISLPFKLIFFV
MVDGWQMVAGGLVRSFGG

Specific function: May be a component of the flagellum. It is required for normal cell division. May be implicated in the secretion of virulence factors [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=211, Percent_Identity=49.2890995260664, Blast_Score=209, Evalue=1e-55,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27519; Mature: 27388

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRSSTGRAARFGAVVMCVVAGAVLAGMPTLAHAQSLSLDLGKGMGDAGTTSRLVQLTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LITILSLAPSLLVMVTAFTRIIVVLSLLRGAIGAQGAPPNTVLIGLALFLTFFVMQPVFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QSWDHGIVPMMDGRVSEMEGLTAAAEPFRTFMLANARPADITTFLHLANVPPPATPAETP
HCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCC
WRVIMPAFMIGELSRGFEMGFLLYLPFLVIDIVTSSVLMSLGMMMLPPATISLPFKLIFF
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VMVDGWQMVAGGLVRSFGG
HHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSRSSTGRAARFGAVVMCVVAGAVLAGMPTLAHAQSLSLDLGKGMGDAGTTSRLVQLTA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LITILSLAPSLLVMVTAFTRIIVVLSLLRGAIGAQGAPPNTVLIGLALFLTFFVMQPVFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QSWDHGIVPMMDGRVSEMEGLTAAAEPFRTFMLANARPADITTFLHLANVPPPATPAETP
HCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCC
WRVIMPAFMIGELSRGFEMGFLLYLPFLVIDIVTSSVLMSLGMMMLPPATISLPFKLIFF
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VMVDGWQMVAGGLVRSFGG
HHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7601828; 11259647 [H]