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The map label for this gene is flaC [H]

Identifier: 162147440

GI number: 162147440

Start: 1678193

End: 1679179

Strand: Reverse

Name: flaC [H]

Synonym: GDI_1656

Alternate gene names: 162147440

Gene position: 1679179-1678193 (Counterclockwise)

Preceding gene: 162147446

Following gene: 162147437

Centisome position: 42.57

GC content: 64.84

Gene sequence:

>987_bases
ATGAGCCTTTCCATCAACACCAATACGTCGGAGATGATCGCGCTCCAGACCCTGGACGCCACGCAGACGTCGCTGAGCAA
CACGGAAAACGCCGTCTCCACCGGCAAGTCGGTTGCGACCGCCGCCGACGGCCCGGCCGCCTTCGGCATCGCCCAGCAGA
TGAGCGGCAACATCGCCGGCCAGACCGCCGTGAACAGCGGCCTGTCCTTTGCCGCCCAGGTCGTCAGCGGGACCTCCGAC
GCCGCCAACCAGATCATCACCCTGCTCCAGAGCGTTCAGCACGCCGTCACCAACCTTGGCAACGATTCGGGCTCGCCGAC
CTCGCTGGGCCAGGACGCGACCGAAATCACAGGCTATCTGGCTCAGATCGACACCATCGCCCGGAACGCGACCTTCAATG
GCGTGAACCTGCTGGCCGGCTCGACCACGGATGGCAGCGGCATCACCAGCCAGACCCTGAACTACGTGACGGGCCTGCAG
GGCGACACGCAGTCCGTTTCGGGCTTCAACTCCATGATCTCGAAAGACATGAGCGGCGCCACGAGCACGGGCACGGCTAG
CCTCTCGCTGTCGGAAGCGCTGGGTCTGGCGGTCGGCGGCTCGGCCGGCGGCAACGCGACCGCGAACGTTTTTGTTTCGT
TCAACCCCACCAGCGGCACGGGCGCCTTCACCGGCACCTTCGGCAACTCTGCCGGCATCGCTTCCACCGGCGTCGCCATG
ATGATCACGCAGGTTCAGGACGCCATCACCGCGATGACGAACGTCACCTCGACGCTCGGCAATGCCTCGAACCTGATCGC
CAGCATGACCACGTATGGCACGACCGTTTCTGACGACCTGACGGCGGGCGTCGGTGCGCTGACGGATGCCAACATGGCCG
CCGAGAGCGCGCAGCTCACCTCGCTGCAGACCAAGCAGTCCCTGGCGATCAAGTCCCTGACGATCGCGAACGGCCAGTCC
CAGAACATTCTGCAGCTGTTCCAGTAA

Upstream 100 bases:

>100_bases
CCTTAAAAAAGACCATGCAGCTAACCTTCTCTTTACCATTTTCGGCTCTACTGGCGTTGGAAGAGCGCGCGTCTAGCCCG
ACTCGACATGGAGAAAAAAC

Downstream 100 bases:

>100_bases
TCGTCTTCCGATTACGGTATTACGCAGAAAGTGCCCCCGGCTTCGGCCGGGGGTATTTTTTTTGTCCTGCCGTAAGGCGA
CGGCGAACGAGAGATGTGAC

Product: flagellin C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSLSINTNTSEMIALQTLDATQTSLSNTENAVSTGKSVATAADGPAAFGIAQQMSGNIAGQTAVNSGLSFAAQVVSGTSD
AANQIITLLQSVQHAVTNLGNDSGSPTSLGQDATEITGYLAQIDTIARNATFNGVNLLAGSTTDGSGITSQTLNYVTGLQ
GDTQSVSGFNSMISKDMSGATSTGTASLSLSEALGLAVGGSAGGNATANVFVSFNPTSGTGAFTGTFGNSAGIASTGVAM
MITQVQDAITAMTNVTSTLGNASNLIASMTTYGTTVSDDLTAGVGALTDANMAAESAQLTSLQTKQSLAIKSLTIANGQS
QNILQLFQ

Sequences:

>Translated_328_residues
MSLSINTNTSEMIALQTLDATQTSLSNTENAVSTGKSVATAADGPAAFGIAQQMSGNIAGQTAVNSGLSFAAQVVSGTSD
AANQIITLLQSVQHAVTNLGNDSGSPTSLGQDATEITGYLAQIDTIARNATFNGVNLLAGSTTDGSGITSQTLNYVTGLQ
GDTQSVSGFNSMISKDMSGATSTGTASLSLSEALGLAVGGSAGGNATANVFVSFNPTSGTGAFTGTFGNSAGIASTGVAM
MITQVQDAITAMTNVTSTLGNASNLIASMTTYGTTVSDDLTAGVGALTDANMAAESAQLTSLQTKQSLAIKSLTIANGQS
QNILQLFQ
>Mature_327_residues
SLSINTNTSEMIALQTLDATQTSLSNTENAVSTGKSVATAADGPAAFGIAQQMSGNIAGQTAVNSGLSFAAQVVSGTSDA
ANQIITLLQSVQHAVTNLGNDSGSPTSLGQDATEITGYLAQIDTIARNATFNGVNLLAGSTTDGSGITSQTLNYVTGLQG
DTQSVSGFNSMISKDMSGATSTGTASLSLSEALGLAVGGSAGGNATANVFVSFNPTSGTGAFTGTFGNSAGIASTGVAMM
ITQVQDAITAMTNVTSTLGNASNLIASMTTYGTTVSDDLTAGVGALTDANMAAESAQLTSLQTKQSLAIKSLTIANGQSQ
NILQLFQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 32548; Mature: 32417

Theoretical pI: Translated: 3.70; Mature: 3.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSINTNTSEMIALQTLDATQTSLSNTENAVSTGKSVATAADGPAAFGIAQQMSGNIAG
CEEECCCCCCCEEEEEECCHHHHHHCCCHHHHHCCCCCEECCCCCHHHHHHHHHCCCCCC
QTAVNSGLSFAAQVVSGTSDAANQIITLLQSVQHAVTNLGNDSGSPTSLGQDATEITGYL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
AQIDTIARNATFNGVNLLAGSTTDGSGITSQTLNYVTGLQGDTQSVSGFNSMISKDMSGA
HHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
TSTGTASLSLSEALGLAVGGSAGGNATANVFVSFNPTSGTGAFTGTFGNSAGIASTGVAM
CCCCCEEEEHHHHHCEEECCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHH
MITQVQDAITAMTNVTSTLGNASNLIASMTTYGTTVSDDLTAGVGALTDANMAAESAQLT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHH
SLQTKQSLAIKSLTIANGQSQNILQLFQ
HHHHHHHHHHEEEEECCCCCCHHHHHCC
>Mature Secondary Structure 
SLSINTNTSEMIALQTLDATQTSLSNTENAVSTGKSVATAADGPAAFGIAQQMSGNIAG
EEECCCCCCCEEEEEECCHHHHHHCCCHHHHHCCCCCEECCCCCHHHHHHHHHCCCCCC
QTAVNSGLSFAAQVVSGTSDAANQIITLLQSVQHAVTNLGNDSGSPTSLGQDATEITGYL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
AQIDTIARNATFNGVNLLAGSTTDGSGITSQTLNYVTGLQGDTQSVSGFNSMISKDMSGA
HHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
TSTGTASLSLSEALGLAVGGSAGGNATANVFVSFNPTSGTGAFTGTFGNSAGIASTGVAM
CCCCCEEEEHHHHHCEEECCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHH
MITQVQDAITAMTNVTSTLGNASNLIASMTTYGTTVSDDLTAGVGALTDANMAAESAQLT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHH
SLQTKQSLAIKSLTIANGQSQNILQLFQ
HHHHHHHHHHEEEEECCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335288; 11481430 [H]