| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is wcaA [C]
Identifier: 162147394
GI number: 162147394
Start: 1611832
End: 1614729
Strand: Reverse
Name: wcaA [C]
Synonym: GDI_1609
Alternate gene names: 162147394
Gene position: 1614729-1611832 (Counterclockwise)
Preceding gene: 162147397
Following gene: 162147393
Centisome position: 40.94
GC content: 64.15
Gene sequence:
>2898_bases ATGCTGTGCGGGAGGAGTCGGTTGGAATTTTCGGTTCATGCCGAGGCCGGGATACCGGGAATGATCCTCGGACTGTCGGA CGACCTGTTTCGGACCGGCGCCGAGGGGGATGTGGGCGTACTGCTCGATGGCGTGTATCGGGGGCAGGCGTCCGTCCGGC GCGAGGCCGGCCGGGTCCTTGTCGGCCTGCCGACCCATCTGCTGGCGCGCGAGGTCGATCTGCTGGATCTGCGGGACGGG CGAAGCCTTCTGAAGACGGCGTGCTTCATCCTGCCCTGTTACGAACTGACGACGGGTGCGATCACGGTATCCGGCGGCGC CATCGTGGGCGATTTCTCGGTGCGCGGACTGGACGACCATGTCCTGGTCGAATGTATCGAGAACGGCCAGGTCCTGGCGC GGGGCTTCGCTACCCGTGCCGGGGGGACGGATTACCGGTTTCATCTTCCTTTCCCCACCCTGCTGACTCCGCAGCAGCAG GTAGCCTGCCTGTTCAGGATCGCCGGCCTGTTCCTGGACGGGCCGCCCTTCCTGCTGACGATGCAGACGTTGGGCTATCT GGGTTATGTCGACCGGCCGGAACCGGGGTGCGTCACCGGCTGGGTGTGCGACATGACCATGCCGGACCGGCGGGTGGCCG TCGATCTGGTGCGCGACGGCGTGGTGCTGCAGACCGTCCTGGCGGACCGGTTCCGCGAGGATCTGCTGGCCCTCGGCATC GGGGACGGTCACGCCGGGTTTTCCTTCACGCTGCCGCATGACGGATCGTTCCGCAATCCGGCCGATGTCTCGGTCGTCGT ATCCGGCGGCAGCCTGAACCTGGTCAATTCCCCCCTCATGGTCTTCGCGCCGCCGCCGTTCCGGGGCGCGTTCGACCGGC TGCACGGCATGTCCGCCCATGGCTGGGCCCTGAACATGGCGGACCCGAAAACGCCCGTGCAGGTCGAGGCCGTCTGCAAC GGCCAGGTCCTGGCCACGGCCACCGCGCGGCTGTTTCGCGGCGACCTGCTGGATGCGGGTCTGAACGAAGGTTTCTGCGC CTACAAGATCGACATCGGCAAGCAGATCCTGGATCTGCTGGGGCAGGAGATCCAGGTCCGCATCGCCGGCCATCCCGACC TGGTCCTGACGGGTTCGCCGCAGGTGGCGACGCAGAACCCCAACCTGCTGCGCTACCTGAAGCCCGCGCGCGGGATGAAT CCGGCCTTGCTGCCGCGCCTGCGCCGGACACTGGATCACCGCGTGGGGCCTTTGCGATTATCCATCGTCATGCCGGTGTA CAATACGCCGCGCGACTGGCTGGTCCAGGCGATCGAAAGCGTCCTGGCCCAATGGTGCGGACGGTGGGAACTGATCTGCA TCGACGATTGTTCGACCGCGCCGCATGTGGGCGCGGTGCTGCGCGCGTACGCGGACAGGGACCCGCGCATCCGCGTGCTG ACGCCGCAGGTCAATGGCGGCATCGCGGTTGCGACCAATCTGGGCCTGCGCGCCGCGCGCGGCGATTATGTCACATTCCT GGACCATGACGATGTCCTGGAACCCGATGCGATCTACCACCTTCTGAAGACGGCGCGGGAGACGGATGCCGATTTCATCT ATTCCGACGAGGCGACGACCGACGAGAACATCGACAGCATCGCGGACGTCAAGGCGCGGCCCGCCTTTTCCTATGATTAC TATCTGTCGCACCCGTATTTCGTGCATATGCTCTGCGTCCGGCGTCGCCTCGCCCATGAAATCGGCGGATGGGACGAACG GATGGCGATTTCCGCCGACGTGGATTTCGTGCTGCGCGTCCTGGCCCGGGCCGCCAGCATCGCCCATGTTCCCCGAATCC TGTATCGCTGGCGGACCCATGGCGGCAGCACAGGCCATGCGAAGAAGAAAGCGGTGATGGAGGCGACATGCGCCGCCATC CAGCGGCACCTGGACCAGGCCCACCCGGGGGCGATGGTGTCCGCCGGGTTGGGGTTCAACCAGTTCCGTGTCGACTGGCC GGCGACGGAAGGGAAAATCCTGATCGTCATCCCGACGAAGAACAAGGCCGACCTGGTGCGTGTCGCCATCGACTCCATCG CGCGGACATCCGCCGGCGCGGACTACCGGATCGTCGTCGTCGATCATGATTCCACCGAGCCCGAATCGGTCGCCTATTTC AAGTCGATCCGCGATCGCTGCACGGTCATGAAATATACCGGCGAATTCAACTATTCCCGCATGAACAACCTGGCCGTCCG GAAACATGGCAGGGACGCCGATTTCATCCTGTTCCTGAACAACGATATCGAGGCGATCACCGACGGGTGGCTGGACAGGA TGCGGCGGCTGGCCCATCGGCCGGAGGTCGGGATCGTCGGTGCCCTGCTGCTCTATCCGGACCGGCGCGTACAACATGCG GGCGTCATCATGGGATTCAATGGATCGGCCGATCATGCCTTCAAGTTCGAGGATGTCTATCTGAACGACGGAAACCAGAG GAGTTTCGGCTATAATTGCAGCCTGACATCGGTGCGCGATTTTTCCGCCGTCACCGCGGCCTGCATGATGATGCGCAGAT CCGTCTTCGATCAGGTGGGGGGATTCGACGAAACCCTGAAGGTCGGGTTCAACGATACCGATTTCTGCCTGCGTGTTCGC GAGGCGGGGCTGAAGGTCCTGTATGACGGCTATACCGTCCTGTTCCATCATGAAAGCGCCACGCGCAGCCAGACCAGACA GGTCATGCACCCCGAGGATACCGAGCGGATGCTGCACCGGCATGGCCGGATACTGGAAGGCGGCGACCCGTTCTATAATC CCAATCTGAGCGTGACGGCACAGGATCATGTCGTGCGCGACGATAACGGATGCGGGCGGGGCCGCGTGCGCGTCACGCGC CTTTGTGCCTCGATGTAA
Upstream 100 bases:
>100_bases CATGGTGTGGCACAGGGGTTTACGCAAATTTAAGACCGCTCCGGAACCTGGCTGACCTGGAAAGCAAGTATTAATCAAAT TCCCGTACACACCCCCTGCG
Downstream 100 bases:
>100_bases AGCATGACGATCCTGTCGGCACCGTCTCCGGAAGATCGGCGTACGCTGCATCAGGCGCTGGAGATGTGGGACGGCTTCGT GCTGTTGCGGGAAGGCGAGG
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 965; Mature: 965
Protein sequence:
>965_residues MLCGRSRLEFSVHAEAGIPGMILGLSDDLFRTGAEGDVGVLLDGVYRGQASVRREAGRVLVGLPTHLLAREVDLLDLRDG RSLLKTACFILPCYELTTGAITVSGGAIVGDFSVRGLDDHVLVECIENGQVLARGFATRAGGTDYRFHLPFPTLLTPQQQ VACLFRIAGLFLDGPPFLLTMQTLGYLGYVDRPEPGCVTGWVCDMTMPDRRVAVDLVRDGVVLQTVLADRFREDLLALGI GDGHAGFSFTLPHDGSFRNPADVSVVVSGGSLNLVNSPLMVFAPPPFRGAFDRLHGMSAHGWALNMADPKTPVQVEAVCN GQVLATATARLFRGDLLDAGLNEGFCAYKIDIGKQILDLLGQEIQVRIAGHPDLVLTGSPQVATQNPNLLRYLKPARGMN PALLPRLRRTLDHRVGPLRLSIVMPVYNTPRDWLVQAIESVLAQWCGRWELICIDDCSTAPHVGAVLRAYADRDPRIRVL TPQVNGGIAVATNLGLRAARGDYVTFLDHDDVLEPDAIYHLLKTARETDADFIYSDEATTDENIDSIADVKARPAFSYDY YLSHPYFVHMLCVRRRLAHEIGGWDERMAISADVDFVLRVLARAASIAHVPRILYRWRTHGGSTGHAKKKAVMEATCAAI QRHLDQAHPGAMVSAGLGFNQFRVDWPATEGKILIVIPTKNKADLVRVAIDSIARTSAGADYRIVVVDHDSTEPESVAYF KSIRDRCTVMKYTGEFNYSRMNNLAVRKHGRDADFILFLNNDIEAITDGWLDRMRRLAHRPEVGIVGALLLYPDRRVQHA GVIMGFNGSADHAFKFEDVYLNDGNQRSFGYNCSLTSVRDFSAVTAACMMMRRSVFDQVGGFDETLKVGFNDTDFCLRVR EAGLKVLYDGYTVLFHHESATRSQTRQVMHPEDTERMLHRHGRILEGGDPFYNPNLSVTAQDHVVRDDNGCGRGRVRVTR LCASM
Sequences:
>Translated_965_residues MLCGRSRLEFSVHAEAGIPGMILGLSDDLFRTGAEGDVGVLLDGVYRGQASVRREAGRVLVGLPTHLLAREVDLLDLRDG RSLLKTACFILPCYELTTGAITVSGGAIVGDFSVRGLDDHVLVECIENGQVLARGFATRAGGTDYRFHLPFPTLLTPQQQ VACLFRIAGLFLDGPPFLLTMQTLGYLGYVDRPEPGCVTGWVCDMTMPDRRVAVDLVRDGVVLQTVLADRFREDLLALGI GDGHAGFSFTLPHDGSFRNPADVSVVVSGGSLNLVNSPLMVFAPPPFRGAFDRLHGMSAHGWALNMADPKTPVQVEAVCN GQVLATATARLFRGDLLDAGLNEGFCAYKIDIGKQILDLLGQEIQVRIAGHPDLVLTGSPQVATQNPNLLRYLKPARGMN PALLPRLRRTLDHRVGPLRLSIVMPVYNTPRDWLVQAIESVLAQWCGRWELICIDDCSTAPHVGAVLRAYADRDPRIRVL TPQVNGGIAVATNLGLRAARGDYVTFLDHDDVLEPDAIYHLLKTARETDADFIYSDEATTDENIDSIADVKARPAFSYDY YLSHPYFVHMLCVRRRLAHEIGGWDERMAISADVDFVLRVLARAASIAHVPRILYRWRTHGGSTGHAKKKAVMEATCAAI QRHLDQAHPGAMVSAGLGFNQFRVDWPATEGKILIVIPTKNKADLVRVAIDSIARTSAGADYRIVVVDHDSTEPESVAYF KSIRDRCTVMKYTGEFNYSRMNNLAVRKHGRDADFILFLNNDIEAITDGWLDRMRRLAHRPEVGIVGALLLYPDRRVQHA GVIMGFNGSADHAFKFEDVYLNDGNQRSFGYNCSLTSVRDFSAVTAACMMMRRSVFDQVGGFDETLKVGFNDTDFCLRVR EAGLKVLYDGYTVLFHHESATRSQTRQVMHPEDTERMLHRHGRILEGGDPFYNPNLSVTAQDHVVRDDNGCGRGRVRVTR LCASM >Mature_965_residues MLCGRSRLEFSVHAEAGIPGMILGLSDDLFRTGAEGDVGVLLDGVYRGQASVRREAGRVLVGLPTHLLAREVDLLDLRDG RSLLKTACFILPCYELTTGAITVSGGAIVGDFSVRGLDDHVLVECIENGQVLARGFATRAGGTDYRFHLPFPTLLTPQQQ VACLFRIAGLFLDGPPFLLTMQTLGYLGYVDRPEPGCVTGWVCDMTMPDRRVAVDLVRDGVVLQTVLADRFREDLLALGI GDGHAGFSFTLPHDGSFRNPADVSVVVSGGSLNLVNSPLMVFAPPPFRGAFDRLHGMSAHGWALNMADPKTPVQVEAVCN GQVLATATARLFRGDLLDAGLNEGFCAYKIDIGKQILDLLGQEIQVRIAGHPDLVLTGSPQVATQNPNLLRYLKPARGMN PALLPRLRRTLDHRVGPLRLSIVMPVYNTPRDWLVQAIESVLAQWCGRWELICIDDCSTAPHVGAVLRAYADRDPRIRVL TPQVNGGIAVATNLGLRAARGDYVTFLDHDDVLEPDAIYHLLKTARETDADFIYSDEATTDENIDSIADVKARPAFSYDY YLSHPYFVHMLCVRRRLAHEIGGWDERMAISADVDFVLRVLARAASIAHVPRILYRWRTHGGSTGHAKKKAVMEATCAAI QRHLDQAHPGAMVSAGLGFNQFRVDWPATEGKILIVIPTKNKADLVRVAIDSIARTSAGADYRIVVVDHDSTEPESVAYF KSIRDRCTVMKYTGEFNYSRMNNLAVRKHGRDADFILFLNNDIEAITDGWLDRMRRLAHRPEVGIVGALLLYPDRRVQHA GVIMGFNGSADHAFKFEDVYLNDGNQRSFGYNCSLTSVRDFSAVTAACMMMRRSVFDQVGGFDETLKVGFNDTDFCLRVR EAGLKVLYDGYTVLFHHESATRSQTRQVMHPEDTERMLHRHGRILEGGDPFYNPNLSVTAQDHVVRDDNGCGRGRVRVTR LCASM
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788372, Length=197, Percent_Identity=28.4263959390863, Blast_Score=73, Evalue=1e-13, Organism=Escherichia coli, GI1790044, Length=113, Percent_Identity=37.1681415929204, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 106580; Mature: 106580
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCGRSRLEFSVHAEAGIPGMILGLSDDLFRTGAEGDVGVLLDGVYRGQASVRREAGRVL CCCCCCCCEEEEEECCCCCEEEEECCHHHHHCCCCCCEEEEEECHHCCHHHHHHHCCCEE VGLPTHLLAREVDLLDLRDGRSLLKTACFILPCYELTTGAITVSGGAIVGDFSVRGLDDH EECCHHHHHHCCCEEECCCCHHHHHHHHHHEEHHHHCCCEEEECCCEEEECCEECCCCHH VLVECIENGQVLARGFATRAGGTDYRFHLPFPTLLTPQQQVACLFRIAGLFLDGPPFLLT HHHHHHCCCCEEEEHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE MQTLGYLGYVDRPEPGCVTGWVCDMTMPDRRVAVDLVRDGVVLQTVLADRFREDLLALGI EHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEC GDGHAGFSFTLPHDGSFRNPADVSVVVSGGSLNLVNSPLMVFAPPPFRGAFDRLHGMSAH CCCCCCEEEECCCCCCCCCCCCEEEEEECCEEEEECCCEEEEECCCCCHHHHHHCCCCCC GWALNMADPKTPVQVEAVCNGQVLATATARLFRGDLLDAGLNEGFCAYKIDIGKQILDLL CEEEECCCCCCCEEEEEEECCEEEEHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHC GQEIQVRIAGHPDLVLTGSPQVATQNPNLLRYLKPARGMNPALLPRLRRTLDHRVGPLRL CCEEEEEECCCCCEEEECCCCEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEE SIVMPVYNTPRDWLVQAIESVLAQWCGRWELICIDDCSTAPHVGAVLRAYADRDPRIRVL EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEE TPQVNGGIAVATNLGLRAARGDYVTFLDHDDVLEPDAIYHLLKTARETDADFIYSDEATT CCCCCCCEEEEECCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCC DENIDSIADVKARPAFSYDYYLSHPYFVHMLCVRRRLAHEIGGWDERMAISADVDFVLRV CCCCHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH LARAASIAHVPRILYRWRTHGGSTGHAKKKAVMEATCAAIQRHLDQAHPGAMVSAGLGFN HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC QFRVDWPATEGKILIVIPTKNKADLVRVAIDSIARTSAGADYRIVVVDHDSTEPESVAYF EEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHH KSIRDRCTVMKYTGEFNYSRMNNLAVRKHGRDADFILFLNNDIEAITDGWLDRMRRLAHR HHHHHHEEEEEEECCCCHHHHCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC PEVGIVGALLLYPDRRVQHAGVIMGFNGSADHAFKFEDVYLNDGNQRSFGYNCSLTSVRD CCCCEEEEEEECCCCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCHH FSAVTAACMMMRRSVFDQVGGFDETLKVGFNDTDFCLRVREAGLKVLYDGYTVLFHHESA HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCEEEECCEEEEEECCCH TRSQTRQVMHPEDTERMLHRHGRILEGGDPFYNPNLSVTAQDHVVRDDNGCGRGRVRVTR HHHHHHHCCCCCHHHHHHHHCCCEECCCCCCCCCCEEEEECCCEEECCCCCCCCCHHHHH LCASM HHHCC >Mature Secondary Structure MLCGRSRLEFSVHAEAGIPGMILGLSDDLFRTGAEGDVGVLLDGVYRGQASVRREAGRVL CCCCCCCCEEEEEECCCCCEEEEECCHHHHHCCCCCCEEEEEECHHCCHHHHHHHCCCEE VGLPTHLLAREVDLLDLRDGRSLLKTACFILPCYELTTGAITVSGGAIVGDFSVRGLDDH EECCHHHHHHCCCEEECCCCHHHHHHHHHHEEHHHHCCCEEEECCCEEEECCEECCCCHH VLVECIENGQVLARGFATRAGGTDYRFHLPFPTLLTPQQQVACLFRIAGLFLDGPPFLLT HHHHHHCCCCEEEEHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE MQTLGYLGYVDRPEPGCVTGWVCDMTMPDRRVAVDLVRDGVVLQTVLADRFREDLLALGI EHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEC GDGHAGFSFTLPHDGSFRNPADVSVVVSGGSLNLVNSPLMVFAPPPFRGAFDRLHGMSAH CCCCCCEEEECCCCCCCCCCCCEEEEEECCEEEEECCCEEEEECCCCCHHHHHHCCCCCC GWALNMADPKTPVQVEAVCNGQVLATATARLFRGDLLDAGLNEGFCAYKIDIGKQILDLL CEEEECCCCCCCEEEEEEECCEEEEHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHC GQEIQVRIAGHPDLVLTGSPQVATQNPNLLRYLKPARGMNPALLPRLRRTLDHRVGPLRL CCEEEEEECCCCCEEEECCCCEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEE SIVMPVYNTPRDWLVQAIESVLAQWCGRWELICIDDCSTAPHVGAVLRAYADRDPRIRVL EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEE TPQVNGGIAVATNLGLRAARGDYVTFLDHDDVLEPDAIYHLLKTARETDADFIYSDEATT CCCCCCCEEEEECCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCC DENIDSIADVKARPAFSYDYYLSHPYFVHMLCVRRRLAHEIGGWDERMAISADVDFVLRV CCCCHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH LARAASIAHVPRILYRWRTHGGSTGHAKKKAVMEATCAAIQRHLDQAHPGAMVSAGLGFN HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC QFRVDWPATEGKILIVIPTKNKADLVRVAIDSIARTSAGADYRIVVVDHDSTEPESVAYF EEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHH KSIRDRCTVMKYTGEFNYSRMNNLAVRKHGRDADFILFLNNDIEAITDGWLDRMRRLAHR HHHHHHEEEEEEECCCCHHHHCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC PEVGIVGALLLYPDRRVQHAGVIMGFNGSADHAFKFEDVYLNDGNQRSFGYNCSLTSVRD CCCCEEEEEEECCCCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCHH FSAVTAACMMMRRSVFDQVGGFDETLKVGFNDTDFCLRVREAGLKVLYDGYTVLFHHESA HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCEEEECCEEEEEECCCH TRSQTRQVMHPEDTERMLHRHGRILEGGDPFYNPNLSVTAQDHVVRDDNGCGRGRVRVTR HHHHHHHCCCCCHHHHHHHHCCCEECCCCCCCCCCEEEEECCCEEECCCCCCCCCHHHHH LCASM HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]