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The map label for this gene is arsR [H]

Identifier: 162147283

GI number: 162147283

Start: 1494777

End: 1495601

Strand: Reverse

Name: arsR [H]

Synonym: GDI_1488

Alternate gene names: 162147283

Gene position: 1495601-1494777 (Counterclockwise)

Preceding gene: 162147287

Following gene: 162147282

Centisome position: 37.92

GC content: 69.21

Gene sequence:

>825_bases
GTGAGGCCCGGACACCATGAAGGAAGATACGGACCCGTGACCGAGACCGAACGCCAGCGCCAGATCATCACCATGCTCGA
AACACGTCCCTTCGCGACCGTGCGGGAACTGATCGACATGCTGAGCGTGTCGCCGGCCACGGTGCGCCGCGATATCGAAA
AGCTCCACGAGGCCGGCGAGGCGCGCAAGGTCTTTGGCGGCGTCGCGTCCCTGACCGCCGCGTCGCGGACCCACGCCCTG
CCCTTCGCCCAGAGCAGCGACCTGGCCGTCGATGCCAAGCGGGCGATCGCGGCGATGGCGGCGGACCTGTGCCGCGACGG
GGACATGGTCATGGTCGCGGGCGGATCGACCTGCCACCAGCTGGGCCTGCGCCTGGCCGGGCGGTCGATCGGGCTTTACA
CCAATTCGATGCCGCTGGCGGCGGCCCTGGGCACCCACGGCGCCTGTCAGCTTTCGGTGGCCGGCGGCGCCCTGCATCGC
GAACCGGGCATCCTGTACGACCCGCAGGCTGCGGCGCCGGATTTCTTCGCGTCGCGCCTGTTCCTGGGCGCGCAGGGGCT
GGGGCTGGAGGGGGTGATGGAATCGCACCCGCTGCTGCCGGTGGCCACGCGCCCGATGCTGGAACGCGCCGACGACGTGA
TCGTGCTGGCCGACAGCCGCAAACTGTCGGTGCGGGCACGCTTTGTTTCATGTCCGATCGACCGGGTGTCCACCCTGATC
ACCGATGACGGCGTGCAGGAGGATGATGTGCGTATTCTTGAAGATGCGGGCGTGACGGTCCTGGTCGCCCCCGTGGCCGC
CTGGCGCGCGGACGACAAGACGTGA

Upstream 100 bases:

>100_bases
GACGGTATGACGTATTTCAATCACAAAAGATGGAATGCCATCATCATTTGGCGCAGGTCAATCAAATTTCGCTTGACCAC
GGCTGGGGATACGGAGAATC

Downstream 100 bases:

>100_bases
CCCCGGAAATCGCGCGCCCGACGCTGGCGGTATTCGATTTCGGCAAGACGAACGCCAAGCTGCTGGTGTTCGGCGCGGAC
GGATCGATCCTGGCCGAGCG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRPGHHEGRYGPVTETERQRQIITMLETRPFATVRELIDMLSVSPATVRRDIEKLHEAGEARKVFGGVASLTAASRTHAL
PFAQSSDLAVDAKRAIAAMAADLCRDGDMVMVAGGSTCHQLGLRLAGRSIGLYTNSMPLAAALGTHGACQLSVAGGALHR
EPGILYDPQAAAPDFFASRLFLGAQGLGLEGVMESHPLLPVATRPMLERADDVIVLADSRKLSVRARFVSCPIDRVSTLI
TDDGVQEDDVRILEDAGVTVLVAPVAAWRADDKT

Sequences:

>Translated_274_residues
MRPGHHEGRYGPVTETERQRQIITMLETRPFATVRELIDMLSVSPATVRRDIEKLHEAGEARKVFGGVASLTAASRTHAL
PFAQSSDLAVDAKRAIAAMAADLCRDGDMVMVAGGSTCHQLGLRLAGRSIGLYTNSMPLAAALGTHGACQLSVAGGALHR
EPGILYDPQAAAPDFFASRLFLGAQGLGLEGVMESHPLLPVATRPMLERADDVIVLADSRKLSVRARFVSCPIDRVSTLI
TDDGVQEDDVRILEDAGVTVLVAPVAAWRADDKT
>Mature_274_residues
MRPGHHEGRYGPVTETERQRQIITMLETRPFATVRELIDMLSVSPATVRRDIEKLHEAGEARKVFGGVASLTAASRTHAL
PFAQSSDLAVDAKRAIAAMAADLCRDGDMVMVAGGSTCHQLGLRLAGRSIGLYTNSMPLAAALGTHGACQLSVAGGALHR
EPGILYDPQAAAPDFFASRLFLGAQGLGLEGVMESHPLLPVATRPMLERADDVIVLADSRKLSVRARFVSCPIDRVSTLI
TDDGVQEDDVRILEDAGVTVLVAPVAAWRADDKT

Specific function: Represses ulaG and the ulaABCDEF operon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790635, Length=250, Percent_Identity=31.2, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1789059, Length=251, Percent_Identity=27.4900398406374, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1789519, Length=252, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI226510968, Length=252, Percent_Identity=26.984126984127, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI87082344, Length=235, Percent_Identity=27.2340425531915, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790753, Length=251, Percent_Identity=23.1075697211155, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789170, Length=233, Percent_Identity=24.8927038626609, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789829, Length=237, Percent_Identity=26.1603375527426, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787540, Length=253, Percent_Identity=23.3201581027668, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 29243; Mature: 29243

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPGHHEGRYGPVTETERQRQIITMLETRPFATVRELIDMLSVSPATVRRDIEKLHEAGE
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCH
ARKVFGGVASLTAASRTHALPFAQSSDLAVDAKRAIAAMAADLCRDGDMVMVAGGSTCHQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
LGLRLAGRSIGLYTNSMPLAAALGTHGACQLSVAGGALHREPGILYDPQAAAPDFFASRL
HHHHHCCCEEEEEECCCCHHHHHCCCCEEEEEECCCCEECCCCCEECCCCCCHHHHHHHH
FLGAQGLGLEGVMESHPLLPVATRPMLERADDVIVLADSRKLSVRARFVSCPIDRVSTLI
HHCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCEEEEECCCEEEEEEEEECCCHHHHHHHH
TDDGVQEDDVRILEDAGVTVLVAPVAAWRADDKT
CCCCCCCCCCEEEECCCCEEEEECHHHHCCCCCC
>Mature Secondary Structure
MRPGHHEGRYGPVTETERQRQIITMLETRPFATVRELIDMLSVSPATVRRDIEKLHEAGE
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCH
ARKVFGGVASLTAASRTHALPFAQSSDLAVDAKRAIAAMAADLCRDGDMVMVAGGSTCHQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
LGLRLAGRSIGLYTNSMPLAAALGTHGACQLSVAGGALHREPGILYDPQAAAPDFFASRL
HHHHHCCCEEEEEECCCCHHHHHCCCCEEEEEECCCCEECCCCCEECCCCCCHHHHHHHH
FLGAQGLGLEGVMESHPLLPVATRPMLERADDVIVLADSRKLSVRARFVSCPIDRVSTLI
HHCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCEEEEECCCEEEEEEEEECCCHHHHHHHH
TDDGVQEDDVRILEDAGVTVLVAPVAAWRADDKT
CCCCCCCCCCEEEECCCCEEEEECHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA