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The map label for this gene is exbD2 [H]

Identifier: 162147181

GI number: 162147181

Start: 1391802

End: 1392236

Strand: Direct

Name: exbD2 [H]

Synonym: GDI_1386

Alternate gene names: 162147181

Gene position: 1391802-1392236 (Clockwise)

Preceding gene: 162147180

Following gene: 162147182

Centisome position: 35.29

GC content: 60.46

Gene sequence:

>435_bases
ATGGGCATGAATGTCGGCGCTGAAAGCACCACCGAAGACGAAGGCATCGTCGATATCAACACGACGCCGCTGATCGACGT
CATGCTGGTGCTGCTGATCATGCTGATCATCACCATTCCGCTGCAGACCCATTCGGTCGCGCTGGACCTGCCGCAGGGCA
ATCCGCCGCCCTCGACCGAGGTGCCGAAGGTCGTGACCGTTGCCATCGATTTCGATAACAGCATTTCGTGGAATGGCGAG
CCGATCACCGACGAGGGCTCGTTGCAGGCGCATTTCGTCGCGGCGGCGGCGCAGCCCGACCAGCCGGAAATGCACATCCA
CCCGAATCGCCTGGCCGATTACAAGACGGTGGCGCATGTCCTCGCGGATGCCCAGAGGCTTGGCATGACCAAGCTGGGTA
TCGTAGGTCAGGATCAGTTCATGGAAGGACAGTGA

Upstream 100 bases:

>100_bases
GACTGACGGACGGCGTGACCCGGTTCCGGCCTGCCGGAACCGGGGACACCGGGGGATTCACATCCGGGCACTGGCCCGCG
TATTTAGAGAGTACACCGCC

Downstream 100 bases:

>100_bases
GCTGATGTCATCGAGTCTGTTCCGCGCCGGCCTTCTCGCCGGTGCGATCGTTGCACTTCCCTTTTCGATGTCCGTCGCCG
GGTCTGCCCAGGCCGCGGAT

Product: biopolymer transport exbD2 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MGMNVGAESTTEDEGIVDINTTPLIDVMLVLLIMLIITIPLQTHSVALDLPQGNPPPSTEVPKVVTVAIDFDNSISWNGE
PITDEGSLQAHFVAAAAQPDQPEMHIHPNRLADYKTVAHVLADAQRLGMTKLGIVGQDQFMEGQ

Sequences:

>Translated_144_residues
MGMNVGAESTTEDEGIVDINTTPLIDVMLVLLIMLIITIPLQTHSVALDLPQGNPPPSTEVPKVVTVAIDFDNSISWNGE
PITDEGSLQAHFVAAAAQPDQPEMHIHPNRLADYKTVAHVLADAQRLGMTKLGIVGQDQFMEGQ
>Mature_143_residues
GMNVGAESTTEDEGIVDINTTPLIDVMLVLLIMLIITIPLQTHSVALDLPQGNPPPSTEVPKVVTVAIDFDNSISWNGEP
ITDEGSLQAHFVAAAAQPDQPEMHIHPNRLADYKTVAHVLADAQRLGMTKLGIVGQDQFMEGQ

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=121, Percent_Identity=33.8842975206612, Blast_Score=73, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15491; Mature: 15360

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMNVGAESTTEDEGIVDINTTPLIDVMLVLLIMLIITIPLQTHSVALDLPQGNPPPSTE
CCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
VPKVVTVAIDFDNSISWNGEPITDEGSLQAHFVAAAAQPDQPEMHIHPNRLADYKTVAHV
CCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHH
LADAQRLGMTKLGIVGQDQFMEGQ
HHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GMNVGAESTTEDEGIVDINTTPLIDVMLVLLIMLIITIPLQTHSVALDLPQGNPPPSTE
CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
VPKVVTVAIDFDNSISWNGEPITDEGSLQAHFVAAAAQPDQPEMHIHPNRLADYKTVAHV
CCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHH
LADAQRLGMTKLGIVGQDQFMEGQ
HHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]