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The map label for this gene is exbB [H]

Identifier: 162147179

GI number: 162147179

Start: 1390212

End: 1391279

Strand: Direct

Name: exbB [H]

Synonym: GDI_1384

Alternate gene names: 162147179

Gene position: 1390212-1391279 (Clockwise)

Preceding gene: 162147178

Following gene: 162147180

Centisome position: 35.25

GC content: 70.41

Gene sequence:

>1068_bases
ATGACCAGACTGCACCGTGTTCCTGTCGTTGCCGCGTCGGCCCTGGCGGCCGTTCTGAGCGTCTCGTCGCCCGTCATTGC
GGTCGCGCAGGATGCACAGTCCGCCGCTCCGGCCGCCGCTCCTGCTCCTGACGCGTCCGCTCCCGCCGCCCCCGCTCCGG
GTGCGCCGGCTGCCGCCGCTCCGGCCGCGCCCGACGCTTCGGCTCCGGCTGCCCCGGCCGCCGGCGCTCCCGCCCCGGAT
GCCTCGGCTCCGGCCGCGACCCCCGCTCCGGACGCGTCCGCGCCGGCCGCGCCCGCGGTGACCCCGCCGGCCGAAGACGC
CGCCGCGGCCAAGCCCGCCGGCAACCCGTACGGCCTCGATGCCCTGTGGCGGAACGGCGACATCATCGCGCGCGGCGTTC
TGCTGATCATGGTCGCCATGTCGCTGGGCACGTGGTACATCATGGTCACGAAGTTCTTCGAACAGGCCCGCATGTTCTCG
GCCGCCAAGGAGGCTTCGAGCGTGTTCTGGACGAAGTCCTCGATCCAGGAAGGCGCCGCGGCGCTGAAGCCGACCTCGCC
GTTCCGCTACATCGCCGATACCGGCATCGTCGCGGCCGAGCATCATGAGGGCACGATGCAGGAATCGATCGACCTGCATA
GCTGGACGTCCATGTCCATCCAGCGCGCGGTCGATACCATCCAGTCGCGCCTGCAGGGCGGCCTGGCCTTCCTGGGCACC
GTCGGTTCCACCTCGCCGTTCGTCGGTCTGTTCGGCACCGTCTGGGGTATCTATCACGCCCTGACCGCCATCGGCATCGC
CGGCCAGGCGTCGATCGACAAGGTTGCCGGCCCGGTCGGTGAATCGCTGATCATGACCGCCATCGGTCTGGGCACCGCCG
TTCCGGCCGTGCTGGGCTACAACCTGCTGGTTCGCCGCAACAAGGGCGCGATGGACAAGGTCCGCAACTTCGCCGCCGAC
CTGCAGTCGATCCTGCTGGGTGGCTTCCGTCACGGCGTGACGCCGGACATCGTGGTGCGCCCCGATGACTCGCCGACCAC
CACGACGACCTCCAACCGGGTTGCCTGA

Upstream 100 bases:

>100_bases
AACGACTGAAGGTTACCGAAGTTGCCGGAGCCGGCCGGGTGAACCCGACGGCTCCGGGGTTCCGGAAAACGGGCCATCTA
CCACAAAGGATTTGGAGTAC

Downstream 100 bases:

>100_bases
ACATGGCGATGCAAGTCGGAGGCGGCGGCGATGAAGACGAGGTGGTGTCCGCCATCAACACCACTCCGCTTGTCGACGTC
ATGCTGGTGCTGCTGATCAT

Product: biopolymer transport exbB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MTRLHRVPVVAASALAAVLSVSSPVIAVAQDAQSAAPAAAPAPDASAPAAPAPGAPAAAAPAAPDASAPAAPAAGAPAPD
ASAPAATPAPDASAPAAPAVTPPAEDAAAAKPAGNPYGLDALWRNGDIIARGVLLIMVAMSLGTWYIMVTKFFEQARMFS
AAKEASSVFWTKSSIQEGAAALKPTSPFRYIADTGIVAAEHHEGTMQESIDLHSWTSMSIQRAVDTIQSRLQGGLAFLGT
VGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLIMTAIGLGTAVPAVLGYNLLVRRNKGAMDKVRNFAAD
LQSILLGGFRHGVTPDIVVRPDDSPTTTTTSNRVA

Sequences:

>Translated_355_residues
MTRLHRVPVVAASALAAVLSVSSPVIAVAQDAQSAAPAAAPAPDASAPAAPAPGAPAAAAPAAPDASAPAAPAAGAPAPD
ASAPAATPAPDASAPAAPAVTPPAEDAAAAKPAGNPYGLDALWRNGDIIARGVLLIMVAMSLGTWYIMVTKFFEQARMFS
AAKEASSVFWTKSSIQEGAAALKPTSPFRYIADTGIVAAEHHEGTMQESIDLHSWTSMSIQRAVDTIQSRLQGGLAFLGT
VGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLIMTAIGLGTAVPAVLGYNLLVRRNKGAMDKVRNFAAD
LQSILLGGFRHGVTPDIVVRPDDSPTTTTTSNRVA
>Mature_354_residues
TRLHRVPVVAASALAAVLSVSSPVIAVAQDAQSAAPAAAPAPDASAPAAPAPGAPAAAAPAAPDASAPAAPAAGAPAPDA
SAPAATPAPDASAPAAPAVTPPAEDAAAAKPAGNPYGLDALWRNGDIIARGVLLIMVAMSLGTWYIMVTKFFEQARMFSA
AKEASSVFWTKSSIQEGAAALKPTSPFRYIADTGIVAAEHHEGTMQESIDLHSWTSMSIQRAVDTIQSRLQGGLAFLGTV
GSTSPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLIMTAIGLGTAVPAVLGYNLLVRRNKGAMDKVRNFAADL
QSILLGGFRHGVTPDIVVRPDDSPTTTTTSNRVA

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1786958, Length=228, Percent_Identity=30.2631578947368, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1789381, Length=188, Percent_Identity=29.7872340425532, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 35779; Mature: 35648

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLHRVPVVAASALAAVLSVSSPVIAVAQDAQSAAPAAAPAPDASAPAAPAPGAPAAAA
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PAAPDASAPAAPAAGAPAPDASAPAATPAPDASAPAAPAVTPPAEDAAAAKPAGNPYGLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCH
ALWRNGDIIARGVLLIMVAMSLGTWYIMVTKFFEQARMFSAAKEASSVFWTKSSIQEGAA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHH
ALKPTSPFRYIADTGIVAAEHHEGTMQESIDLHSWTSMSIQRAVDTIQSRLQGGLAFLGT
HCCCCCCCHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
VGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLIMTAIGLGTAVPAVLGY
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
NLLVRRNKGAMDKVRNFAADLQSILLGGFRHGVTPDIVVRPDDSPTTTTTSNRVA
HHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRLHRVPVVAASALAAVLSVSSPVIAVAQDAQSAAPAAAPAPDASAPAAPAPGAPAAAA
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PAAPDASAPAAPAAGAPAPDASAPAATPAPDASAPAAPAVTPPAEDAAAAKPAGNPYGLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCH
ALWRNGDIIARGVLLIMVAMSLGTWYIMVTKFFEQARMFSAAKEASSVFWTKSSIQEGAA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHH
ALKPTSPFRYIADTGIVAAEHHEGTMQESIDLHSWTSMSIQRAVDTIQSRLQGGLAFLGT
HCCCCCCCHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
VGSTSPFVGLFGTVWGIYHALTAIGIAGQASIDKVAGPVGESLIMTAIGLGTAVPAVLGY
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
NLLVRRNKGAMDKVRNFAADLQSILLGGFRHGVTPDIVVRPDDSPTTTTTSNRVA
HHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]