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The map label for this gene is rlpA [C]

Identifier: 162147145

GI number: 162147145

Start: 1350055

End: 1350750

Strand: Direct

Name: rlpA [C]

Synonym: GDI_1350

Alternate gene names: 162147145

Gene position: 1350055-1350750 (Clockwise)

Preceding gene: 162147141

Following gene: 162147147

Centisome position: 34.23

GC content: 72.41

Gene sequence:

>696_bases
TTGTTACTGGCCGATTGGCCCAGCAGGATTGGGGACGCATTGAAACAGGACCGGAATGAGCGACGGATACGATCCGGCAG
CCAGGCGCTGATGGCGCTGGCCTGCCTGTTCGCCTTCGCCTCGACCGCCTGTGGCCGCGAAGTGACAGCGGGCGCGGAAA
CGGTGCCGGCCTCCGCGTCCCCCGATATCTCCTCCGCCGTGGGTGACGACGGCCATCCGCCCACCGCCTGGGCGGCCTCG
GTCCGCGCGGCGCTGGCGCGGCGGTCACAGCACCTGATGCATGTCGGCCGTTCCGCCCTGTCCTGGTCCGAACAGGGGGT
GGCCAGTTGGTACGGCCACCTGCGCCGGGTCCGTCCCACCTCGTCGGGCCGTGCGTTCGACCCCCGGGCGCTGACGGCGG
CGCATCCCACCCTGCCGATGGGCACGCGCGTGCTGGTCCGCTCGGAGGATACCGGTCGTTCGGTGGTGGTGACGGTGAAC
GATCGCGGCCCCTTCCTGGGCAGCCGCATCATCGACCTCTCGCCCGCCGCCGCGGCGCGGCTGGGCATGCTGAATGCGGG
CACCGCCCATGTCGTGCTGCAGCCCGCCCCGGTCACCGAAGTGGCGCAGGCCGAATCCACGGATACCAGCGCCGACGCAA
TCGCCGCCGCCGCGCCGGGCGCGCCCCGTCGCGTCGCGCATCACGCCGGGCGCTGA

Upstream 100 bases:

>100_bases
CGGCGAAAGCACCGGCAACATCGCGGCATCGCCCGGTCCTGCGGGGGGACGTGCGGTGAAAAAGCCTTGAGTTCCGGGGA
ACGGGACTGTTGTATGCCCG

Downstream 100 bases:

>100_bases
CCGGCTTCAGCCTCTCACTCGCCTGGCCTGGGGCGCTGCCCGGCATCGCCCTCGCTCGGGCGCAGTTCCATCTCCGCCTC
CAGCCCGGCATTCAGTTCGG

Product: RlpA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLLADWPSRIGDALKQDRNERRIRSGSQALMALACLFAFASTACGREVTAGAETVPASASPDISSAVGDDGHPPTAWAAS
VRAALARRSQHLMHVGRSALSWSEQGVASWYGHLRRVRPTSSGRAFDPRALTAAHPTLPMGTRVLVRSEDTGRSVVVTVN
DRGPFLGSRIIDLSPAAAARLGMLNAGTAHVVLQPAPVTEVAQAESTDTSADAIAAAAPGAPRRVAHHAGR

Sequences:

>Translated_231_residues
MLLADWPSRIGDALKQDRNERRIRSGSQALMALACLFAFASTACGREVTAGAETVPASASPDISSAVGDDGHPPTAWAAS
VRAALARRSQHLMHVGRSALSWSEQGVASWYGHLRRVRPTSSGRAFDPRALTAAHPTLPMGTRVLVRSEDTGRSVVVTVN
DRGPFLGSRIIDLSPAAAARLGMLNAGTAHVVLQPAPVTEVAQAESTDTSADAIAAAAPGAPRRVAHHAGR
>Mature_231_residues
MLLADWPSRIGDALKQDRNERRIRSGSQALMALACLFAFASTACGREVTAGAETVPASASPDISSAVGDDGHPPTAWAAS
VRAALARRSQHLMHVGRSALSWSEQGVASWYGHLRRVRPTSSGRAFDPRALTAAHPTLPMGTRVLVRSEDTGRSVVVTVN
DRGPFLGSRIIDLSPAAAARLGMLNAGTAHVVLQPAPVTEVAQAESTDTSADAIAAAAPGAPRRVAHHAGR

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=84, Percent_Identity=46.4285714285714, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 24118; Mature: 24118

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLADWPSRIGDALKQDRNERRIRSGSQALMALACLFAFASTACGREVTAGAETVPASAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDISSAVGDDGHPPTAWAASVRAALARRSQHLMHVGRSALSWSEQGVASWYGHLRRVRPT
CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSGRAFDPRALTAAHPTLPMGTRVLVRSEDTGRSVVVTVNDRGPFLGSRIIDLSPAAAAR
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCHHHHH
LGMLNAGTAHVVLQPAPVTEVAQAESTDTSADAIAAAAPGAPRRVAHHAGR
HCCCCCCCEEEEECCCCCHHHHHCCCCCCCHHHHHHCCCCCHHHHHHCCCC
>Mature Secondary Structure
MLLADWPSRIGDALKQDRNERRIRSGSQALMALACLFAFASTACGREVTAGAETVPASAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDISSAVGDDGHPPTAWAASVRAALARRSQHLMHVGRSALSWSEQGVASWYGHLRRVRPT
CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSGRAFDPRALTAAHPTLPMGTRVLVRSEDTGRSVVVTVNDRGPFLGSRIIDLSPAAAAR
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCHHHHH
LGMLNAGTAHVVLQPAPVTEVAQAESTDTSADAIAAAAPGAPRRVAHHAGR
HCCCCCCCEEEEECCCCCHHHHHCCCCCCCHHHHHHCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]