| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yffH [C]
Identifier: 162147103
GI number: 162147103
Start: 1309117
End: 1309695
Strand: Reverse
Name: yffH [C]
Synonym: GDI_1308
Alternate gene names: 162147103
Gene position: 1309695-1309117 (Counterclockwise)
Preceding gene: 162147106
Following gene: 162147099
Centisome position: 33.21
GC content: 69.08
Gene sequence:
>579_bases ATGAGCATGGACATTCCACCCGATGATGACGGGGGCTTCGTCACGCTGTCATCGCGCGTCGTCTATGAAAACCCGTGGAC GCGCCTGCGCGAGGACATCATCCGCCGCCCCGACGGGGGCGAGGGGCTGTACGGCGTGGTCGAACGGACGGAATTCGTCG TCATCGTGCCGCTGGGCGAGGGGCCGGACGGCCCCACCGTCACCCTGGTGCGGCAATATCGCTATCCGGTGCGCGCGCGA TTGTGGGAATTGCCGATGGGCATGTGGGAACACCGCCCCGACACCGACCCCGAGATCGTGGCGCGCGGCGAACTGGAAGA GGAGACCGGCCTGCGCGCCGGGCAACTGCGCCATGCCGGCACGCTGTACCAGGGCCCGGGCTATTCCACCCAGCGCGGCC ATGTCTACCTGGCCACCGACCTGACGCAGGGCGAGCCCCGGCGCGAGACGACGGAAGGGGACATGACCTGCCATACGATC CCGCTGGCGGAGGTGGAGCGGATGATCGGCGCCGGCGACATCACCTGCATGGCCACGCTGGCCGCCATGACGCTGGTCCG GGCGCGGAGGTGGCTGTAG
Upstream 100 bases:
>100_bases GGCCGTCACGACCGCGCGAGATGCGGACGGAATGTTGACGCCGCCACCCACCCGCACGCCATGATCACCCCCTGTCGCGG ACACGGGGGCACGACCGAAC
Downstream 100 bases:
>100_bases GCCCCGCGACGGCAAGGGGCCGGAGCCCTTGCCGTCGCGGCCAGTGCGACCGGGTTCAGTGCGCCGGGGCGGCCGGCGCG GGGGCGGGCGGGGCCAGGGT
Product: NUDIX/MutT-family protein
Products: AMP; D-ribose 5-phosphate
Alternate protein names: ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family; NTP Pyrophosphohydrolase; ADP-Ribose Diphosphatase; MutT/NUDIX Family Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Hydrolase; Hydrolase Protein; ADPribose Diphosphatase; NUDIX Hydroxylase; Nudix Hydroxylase; NUDIX Family Hydrolase; NTP Pyrophosphohydrolases; Hydrolase MutT; Pyrophosphohydrolase Related Protein; NUDIX Domain-Containing; MutT/Nudix ADP-Ribose Pyrophosphatase; Nudix Superfamily Hydrolase; Hydrolase NUDIX Family Domain Protein; Hydrolase Nudix Family Protein; Hydrolase NUDIX Family Protein; NUDIX Family Protein
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSMDIPPDDDGGFVTLSSRVVYENPWTRLREDIIRRPDGGEGLYGVVERTEFVVIVPLGEGPDGPTVTLVRQYRYPVRAR LWELPMGMWEHRPDTDPEIVARGELEEETGLRAGQLRHAGTLYQGPGYSTQRGHVYLATDLTQGEPRRETTEGDMTCHTI PLAEVERMIGAGDITCMATLAAMTLVRARRWL
Sequences:
>Translated_192_residues MSMDIPPDDDGGFVTLSSRVVYENPWTRLREDIIRRPDGGEGLYGVVERTEFVVIVPLGEGPDGPTVTLVRQYRYPVRAR LWELPMGMWEHRPDTDPEIVARGELEEETGLRAGQLRHAGTLYQGPGYSTQRGHVYLATDLTQGEPRRETTEGDMTCHTI PLAEVERMIGAGDITCMATLAAMTLVRARRWL >Mature_191_residues SMDIPPDDDGGFVTLSSRVVYENPWTRLREDIIRRPDGGEGLYGVVERTEFVVIVPLGEGPDGPTVTLVRQYRYPVRARL WELPMGMWEHRPDTDPEIVARGELEEETGLRAGQLRHAGTLYQGPGYSTQRGHVYLATDLTQGEPRRETTEGDMTCHTIP LAEVERMIGAGDITCMATLAAMTLVRARRWL
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.13
Molecular weight: Translated: 21568; Mature: 21437
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMDIPPDDDGGFVTLSSRVVYENPWTRLREDIIRRPDGGEGLYGVVERTEFVVIVPLGE CCCCCCCCCCCCEEEEECEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCC GPDGPTVTLVRQYRYPVRARLWELPMGMWEHRPDTDPEIVARGELEEETGLRAGQLRHAG CCCCCEEEEEEHHCCCHHHHHHHCCCCHHCCCCCCCCCEEECCCCCHHHCCCCCCCCCCC TLYQGPGYSTQRGHVYLATDLTQGEPRRETTEGDMTCHTIPLAEVERMIGAGDITCMATL CEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHH AAMTLVRARRWL HHHHHHHHHHCC >Mature Secondary Structure SMDIPPDDDGGFVTLSSRVVYENPWTRLREDIIRRPDGGEGLYGVVERTEFVVIVPLGE CCCCCCCCCCCEEEEECEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCC GPDGPTVTLVRQYRYPVRARLWELPMGMWEHRPDTDPEIVARGELEEETGLRAGQLRHAG CCCCCEEEEEEHHCCCHHHHHHHCCCCHHCCCCCCCCCEEECCCCCHHHCCCCCCCCCCC TLYQGPGYSTQRGHVYLATDLTQGEPRRETTEGDMTCHTIPLAEVERMIGAGDITCMATL CEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHH AAMTLVRARRWL HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ADPribose; H2O
Specific reaction: ADP-ribose + H2O = AMP + D-ribose 5-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA