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The map label for this gene is ompW [C]

Identifier: 162147070

GI number: 162147070

Start: 1271951

End: 1272745

Strand: Direct

Name: ompW [C]

Synonym: GDI_1275

Alternate gene names: 162147070

Gene position: 1271951-1272745 (Clockwise)

Preceding gene: 162147069

Following gene: 162147071

Centisome position: 32.25

GC content: 65.91

Gene sequence:

>795_bases
ATGAAACTGACCCGTACCCTTGCCTTCTCGATGGTTGCCGGCATGGCGGCGCTGGCGCCCGGTGCGGGACGCGCCCAGAC
CGCGACGCCGTCGGCCTATGTCAGCGCGCCCGTGGTGGCCCCCGTCATGGCGCCCCCGCCGTCGCATGGCGGCCATTGCG
GCATCTTCGAAACCTGCGCCAGCACCAAGATCGGTCTGGGCAAGGGCGACTTCCTGATCCGCCTGTCCGCGCTGGGCGTC
CTGCCTGAAGACCGCGACAGCAAGGTGTGGGCCGGCGGTGCGGTGCTGCCCGGGGCGCGGGCCAAGACCACGCGCCAGGT
CATGCCGGAACTGACGTTCGAATACTTCTTCACCGACCACATCTCGGCCGACCTGATCGCCGCCAGCACCCGGCATGAAG
TCGCGGTCGAAGGCAGCGCCCTGGGCCACATCGATGCCGGCAGCGCCTGGGTTCTGCCGCCCACCATCACGATCGCCTAC
CATTTCCGTCCGCACAAGCGGTTCAACCCGTATGTGGGCGTCGGCGCCACGCTGGCGTTTTTCCACAACGAGTCGCCGGC
CGGTGGCCTGGTGAAGAAGCTGAATGTCGGCACGACCGGTGGCCCGTCATTCAATGTCGGCTTCGATTACCAGCTCGTGG
GCAACTGGTTCTTCAACTTCGACGTGAAGCAGATGTTCATGCGCATGCATGCCTGGGCGAACGATGGTGGCGGCGTCGAT
GGCGTTCCGCGCATCAAGGTGCATGACTCGCTGGACCCGACGGTGGTAGGCGCCGGTATCGAATACCGGTTCTGA

Upstream 100 bases:

>100_bases
GGGCCGCGGTTGATTCATGTCAAGGCGACGATAGGGTTCCCATGATCTTTGCGGATAACACGATGTTGTTCGTCGCGAAA
AAACGAAAGGTTCGCACACG

Downstream 100 bases:

>100_bases
TCCCGTGGGGATGCCCTCTTCCGACCTGCTGATCCGGTACGGGGGCAACCTGCCGCGTTACACCAGCTACCCGACCGCGG
CACAGTTCGATGCCTCGGTC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKLTRTLAFSMVAGMAALAPGAGRAQTATPSAYVSAPVVAPVMAPPPSHGGHCGIFETCASTKIGLGKGDFLIRLSALGV
LPEDRDSKVWAGGAVLPGARAKTTRQVMPELTFEYFFTDHISADLIAASTRHEVAVEGSALGHIDAGSAWVLPPTITIAY
HFRPHKRFNPYVGVGATLAFFHNESPAGGLVKKLNVGTTGGPSFNVGFDYQLVGNWFFNFDVKQMFMRMHAWANDGGGVD
GVPRIKVHDSLDPTVVGAGIEYRF

Sequences:

>Translated_264_residues
MKLTRTLAFSMVAGMAALAPGAGRAQTATPSAYVSAPVVAPVMAPPPSHGGHCGIFETCASTKIGLGKGDFLIRLSALGV
LPEDRDSKVWAGGAVLPGARAKTTRQVMPELTFEYFFTDHISADLIAASTRHEVAVEGSALGHIDAGSAWVLPPTITIAY
HFRPHKRFNPYVGVGATLAFFHNESPAGGLVKKLNVGTTGGPSFNVGFDYQLVGNWFFNFDVKQMFMRMHAWANDGGGVD
GVPRIKVHDSLDPTVVGAGIEYRF
>Mature_264_residues
MKLTRTLAFSMVAGMAALAPGAGRAQTATPSAYVSAPVVAPVMAPPPSHGGHCGIFETCASTKIGLGKGDFLIRLSALGV
LPEDRDSKVWAGGAVLPGARAKTTRQVMPELTFEYFFTDHISADLIAASTRHEVAVEGSALGHIDAGSAWVLPPTITIAY
HFRPHKRFNPYVGVGATLAFFHNESPAGGLVKKLNVGTTGGPSFNVGFDYQLVGNWFFNFDVKQMFMRMHAWANDGGGVD
GVPRIKVHDSLDPTVVGAGIEYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 28029; Mature: 28029

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTRTLAFSMVAGMAALAPGAGRAQTATPSAYVSAPVVAPVMAPPPSHGGHCGIFETCA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCHHHHHC
STKIGLGKGDFLIRLSALGVLPEDRDSKVWAGGAVLPGARAKTTRQVMPELTFEYFFTDH
CCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCEECCCCCCHHHHHHHHHHHEEEEECCC
ISADLIAASTRHEVAVEGSALGHIDAGSAWVLPPTITIAYHFRPHKRFNPYVGVGATLAF
CCCEEEEECCCCEEEECCCEEEEECCCCEEEECCEEEEEEEECCCCCCCCCCCCCEEEEE
FHNESPAGGLVKKLNVGTTGGPSFNVGFDYQLVGNWFFNFDVKQMFMRMHAWANDGGGVD
EECCCCCCCEEEEEECCCCCCCCEECCEEEEEEEEEEEEECHHHHHHHHHHHCCCCCCCC
GVPRIKVHDSLDPTVVGAGIEYRF
CCCEEEEECCCCCEEEECCEEECC
>Mature Secondary Structure
MKLTRTLAFSMVAGMAALAPGAGRAQTATPSAYVSAPVVAPVMAPPPSHGGHCGIFETCA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCHHHHHC
STKIGLGKGDFLIRLSALGVLPEDRDSKVWAGGAVLPGARAKTTRQVMPELTFEYFFTDH
CCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCEECCCCCCHHHHHHHHHHHEEEEECCC
ISADLIAASTRHEVAVEGSALGHIDAGSAWVLPPTITIAYHFRPHKRFNPYVGVGATLAF
CCCEEEEECCCCEEEECCCEEEEECCCCEEEECCEEEEEEEECCCCCCCCCCCCCEEEEE
FHNESPAGGLVKKLNVGTTGGPSFNVGFDYQLVGNWFFNFDVKQMFMRMHAWANDGGGVD
EECCCCCCCEEEEEECCCCCCCCEECCEEEEEEEEEEEEECHHHHHHHHHHHCCCCCCCC
GVPRIKVHDSLDPTVVGAGIEYRF
CCCEEEEECCCCCEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]