Click here to switch to the map view.

The map label for this gene is pqqC [H]

Identifier: 162147064

GI number: 162147064

Start: 1267120

End: 1267869

Strand: Reverse

Name: pqqC [H]

Synonym: GDI_1269

Alternate gene names: 162147064

Gene position: 1267869-1267120 (Counterclockwise)

Preceding gene: 162147065

Following gene: 162147063

Centisome position: 32.15

GC content: 69.2

Gene sequence:

>750_bases
ATGACTGGCTCGCCCCTGTCCCCGCCCCTGTCCCCGGACGAACTGGAGGCGGCGTTGCGGGCCATCGGTGCCGCGCGCTA
TCACAACCTGCATCCTTTCCACCGCGCCCTGCATGACGGCAGGCTGAACCGCGCGCAGGTGCAGGCCTGGGCGCTGAACC
GCTATTATTACCAGAGCCGCATCCCGGCCAAGGACGCCACCCTGCTGGCGCGGCTGCCGACGGCGGAACTGCGCCGGGAA
TGGCGGCGGCGGCTGGTGGACCATGACGGCGACGCGCCGGGCACCGGCGGCGTGGCCCGCTGGCTGAAGCTGACCGACGG
GCTGGGGCTGGAACGTGCCGAAGTCGAATCGCTGAAGGGGCTGCTGCCCGCCACCCGCTTCGCGGTCGACGCCTATGTCG
ACTTCGTGCGCGACCGCTCGATACTGGAAGCGATCGCCTCCTCGCTGACCGAACTGTTCTCGCCCACCATCATCAGCGAG
CGCGTGGCGGGCATGCTGCGCCACTATGATTTCGTGACGCCGGAGACCCTGGCCTATTTCCAGCCCCGGCTGACCCAGGC
GCCCCGCGATTCCGATTTCGCCCTGGCCTATGTCCGCGACCATGCCCGCACGGTGCAGGAGCAGCAGGCCGTGCTGGACG
CGCTGACCTTCAAATGCGACGTACTGTGGTCCATGCTGGATGCGCTGGATTACGCCTATGTCTCGCCCGGGCGCATCCCG
CCCGGCGCCTTCCGGCCCCTGCCGGCGTGA

Upstream 100 bases:

>100_bases
TCAACAATTCCAATCCCCTCCTGCTGGCCGACAGCCCGGAGCGCCAGGTCGCGCACCAGGCGGGGTGGGAGGTTTCATTC
GACGGCATGAGGATCACGAC

Downstream 100 bases:

>100_bases
CCGACGCGCCCCCCCGGGATCGGAATGCCGAGCAGGCGGTGATGCGCTTCATGCGCGGCACGCGCCTGCAGCATGACCGG
GTGCGCGACCAGTGGGTGAT

Product: pyrroloquinoline quinone biosynthesis protein PqqC

Products: NA

Alternate protein names: Coenzyme PQQ synthesis protein C; Pyrroloquinoline quinone biosynthesis protein C [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTGSPLSPPLSPDELEAALRAIGAARYHNLHPFHRALHDGRLNRAQVQAWALNRYYYQSRIPAKDATLLARLPTAELRRE
WRRRLVDHDGDAPGTGGVARWLKLTDGLGLERAEVESLKGLLPATRFAVDAYVDFVRDRSILEAIASSLTELFSPTIISE
RVAGMLRHYDFVTPETLAYFQPRLTQAPRDSDFALAYVRDHARTVQEQQAVLDALTFKCDVLWSMLDALDYAYVSPGRIP
PGAFRPLPA

Sequences:

>Translated_249_residues
MTGSPLSPPLSPDELEAALRAIGAARYHNLHPFHRALHDGRLNRAQVQAWALNRYYYQSRIPAKDATLLARLPTAELRRE
WRRRLVDHDGDAPGTGGVARWLKLTDGLGLERAEVESLKGLLPATRFAVDAYVDFVRDRSILEAIASSLTELFSPTIISE
RVAGMLRHYDFVTPETLAYFQPRLTQAPRDSDFALAYVRDHARTVQEQQAVLDALTFKCDVLWSMLDALDYAYVSPGRIP
PGAFRPLPA
>Mature_248_residues
TGSPLSPPLSPDELEAALRAIGAARYHNLHPFHRALHDGRLNRAQVQAWALNRYYYQSRIPAKDATLLARLPTAELRREW
RRRLVDHDGDAPGTGGVARWLKLTDGLGLERAEVESLKGLLPATRFAVDAYVDFVRDRSILEAIASSLTELFSPTIISER
VAGMLRHYDFVTPETLAYFQPRLTQAPRDSDFALAYVRDHARTVQEQQAVLDALTFKCDVLWSMLDALDYAYVSPGRIPP
GAFRPLPA

Specific function: Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ [H]

COG id: COG5424

COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR011845
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: =1.3.3.11 [H]

Molecular weight: Translated: 27934; Mature: 27803

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSPLSPPLSPDELEAALRAIGAARYHNLHPFHRALHDGRLNRAQVQAWALNRYYYQSR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
IPAKDATLLARLPTAELRREWRRRLVDHDGDAPGTGGVARWLKLTDGLGLERAEVESLKG
CCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
LLPATRFAVDAYVDFVRDRSILEAIASSLTELFSPTIISERVAGMLRHYDFVTPETLAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
QPRLTQAPRDSDFALAYVRDHARTVQEQQAVLDALTFKCDVLWSMLDALDYAYVSPGRIP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PGAFRPLPA
CCCCCCCCC
>Mature Secondary Structure 
TGSPLSPPLSPDELEAALRAIGAARYHNLHPFHRALHDGRLNRAQVQAWALNRYYYQSR
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
IPAKDATLLARLPTAELRREWRRRLVDHDGDAPGTGGVARWLKLTDGLGLERAEVESLKG
CCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
LLPATRFAVDAYVDFVRDRSILEAIASSLTELFSPTIISERVAGMLRHYDFVTPETLAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
QPRLTQAPRDSDFALAYVRDHARTVQEQQAVLDALTFKCDVLWSMLDALDYAYVSPGRIP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PGAFRPLPA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111029 [H]