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The map label for this gene is pqqD [H]

Identifier: 162147063

GI number: 162147063

Start: 1266827

End: 1267123

Strand: Reverse

Name: pqqD [H]

Synonym: GDI_1268

Alternate gene names: 162147063

Gene position: 1267123-1266827 (Counterclockwise)

Preceding gene: 162147064

Following gene: 162147062

Centisome position: 32.13

GC content: 70.71

Gene sequence:

>297_bases
GTGACCGACGCGCCCCCCCGGGATCGGAATGCCGAGCAGGCGGTGATGCGCTTCATGCGCGGCACGCGCCTGCAGCATGA
CCGGGTGCGCGACCAGTGGGTGATCCAGGCACCGGAGCGCGCCTTCATCGCCGATCCGGTGGCGACCGAAATCCTGCGCC
TGGTGGACGGGCAGCGGCCGGTGTCCGCCATCATCGACGATCTGGCCGCCCGGTTCGATGCGCCCCGTCCCGTCATCGCC
CGCGACGTGCTGGCGCTGATCGCCGAGTTGACCGACCGGCAGGTGCTGACCACATGA

Upstream 100 bases:

>100_bases
CCTTCAAATGCGACGTACTGTGGTCCATGCTGGATGCGCTGGATTACGCCTATGTCTCGCCCGGGCGCATCCCGCCCGGC
GCCTTCCGGCCCCTGCCGGC

Downstream 100 bases:

>100_bases
CGGCCATGCCTGCCGCCGCCCGCCCTGCCGTTCCCCCGCCGATGAGCCTGCTGGCCGAGCTGACGCATCGCTGTCCGCTG
CAATGCCCGTACTGCTCGAA

Product: coenzyme PQQ synthesis protein D

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D [H]

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTDAPPRDRNAEQAVMRFMRGTRLQHDRVRDQWVIQAPERAFIADPVATEILRLVDGQRPVSAIIDDLAARFDAPRPVIA
RDVLALIAELTDRQVLTT

Sequences:

>Translated_98_residues
MTDAPPRDRNAEQAVMRFMRGTRLQHDRVRDQWVIQAPERAFIADPVATEILRLVDGQRPVSAIIDDLAARFDAPRPVIA
RDVLALIAELTDRQVLTT
>Mature_97_residues
TDAPPRDRNAEQAVMRFMRGTRLQHDRVRDQWVIQAPERAFIADPVATEILRLVDGQRPVSAIIDDLAARFDAPRPVIAR
DVLALIAELTDRQVLTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008792
- InterPro:   IPR022479 [H]

Pfam domain/function: PF05402 PqqD [H]

EC number: NA

Molecular weight: Translated: 11101; Mature: 10970

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAPPRDRNAEQAVMRFMRGTRLQHDRVRDQWVIQAPERAFIADPVATEILRLVDGQRP
CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHCCCCC
VSAIIDDLAARFDAPRPVIARDVLALIAELTDRQVLTT
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure 
TDAPPRDRNAEQAVMRFMRGTRLQHDRVRDQWVIQAPERAFIADPVATEILRLVDGQRP
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHCCCCC
VSAIIDDLAARFDAPRPVIARDVLALIAELTDRQVLTT
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111029 [H]