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The map label for this gene is atpF

Identifier: 162146972

GI number: 162146972

Start: 1174653

End: 1175147

Strand: Reverse

Name: atpF

Synonym: GDI_1177

Alternate gene names: 162146972

Gene position: 1175147-1174653 (Counterclockwise)

Preceding gene: 162146973

Following gene: 162146971

Centisome position: 29.79

GC content: 72.32

Gene sequence:

>495_bases
ATGCTGCATGAACCCCGTTTCTGGTCGGCCGTCGCCTTCGTCCTCTTCTTCGTCCTGTTCGGCAAGAAGCTCTGGACGCC
GCTGGCCGCCGCCCTGGACAGCCGCGCCGACCGCATCCGCGCCGACCTGGACGAGGCCGCGCGCCTGCGTCGCGAGGCCG
AGCAGATGCTGGAAGACGCGACCCGCGAGCGTGAAACCGCGATGGTCGAGGCCCGCGCCCTGGTCGAGCATTCGCTGATC
GAGGCCGCGCGCATTGCCGACGAGGCCCGTCGCGAGGCCGAAGCCGTTGCCACCCGCCGCGAACAGATGGCCCGTGACCG
CATCGCGGCCTCGGAACGCAGCGCGGTGCGCGAGGTCCGGCAGGTCGCGATCGACGTGGCGATCCAGGCCACGCGCGATG
TGCTGGCCACGGCGCTTCCGGCCGGCGCGGACCATGCGATCGTCGATCGGGCGATCGCCGACCTGCCGTCGGCCCTGTCC
CACCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
CGGCACGTCGGTTCCGGCCGACCAACTGGCCCGCCGGGTCGACGACGCCGCGACGGCGCACGGTTTCTGATCGCGGACGC
AAAGGAACAGGTCCAAGACC

Downstream 100 bases:

>100_bases
CCGGGGTCGCCCTTCTGACCGTGTCCTCATCCCCTGATCGTTCGGAGCCCGTCCTTTCGATCGTGGCGGCCGTCCTGAAC
GAGGCGGAGAACATTCGGCC

Product: ATP synthase

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MLHEPRFWSAVAFVLFFVLFGKKLWTPLAAALDSRADRIRADLDEAARLRREAEQMLEDATRERETAMVEARALVEHSLI
EAARIADEARREAEAVATRREQMARDRIAASERSAVREVRQVAIDVAIQATRDVLATALPAGADHAIVDRAIADLPSALS
HRAA

Sequences:

>Translated_164_residues
MLHEPRFWSAVAFVLFFVLFGKKLWTPLAAALDSRADRIRADLDEAARLRREAEQMLEDATRERETAMVEARALVEHSLI
EAARIADEARREAEAVATRREQMARDRIAASERSAVREVRQVAIDVAIQATRDVLATALPAGADHAIVDRAIADLPSALS
HRAA
>Mature_164_residues
MLHEPRFWSAVAFVLFFVLFGKKLWTPLAAALDSRADRIRADLDEAARLRREAEQMLEDATRERETAMVEARALVEHSLI
EAARIADEARREAEAVATRREQMARDRIAASERSAVREVRQVAIDVAIQATRDVLATALPAGADHAIVDRAIADLPSALS
HRAA

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_GLUDA (A9HDM4)

Other databases:

- EMBL:   CP001189
- EMBL:   AM889285
- RefSeq:   YP_001601433.1
- RefSeq:   YP_002276265.1
- GeneID:   5791617
- GeneID:   6975313
- GenomeReviews:   AM889285_GR
- GenomeReviews:   CP001189_GR
- KEGG:   gdj:Gdia_1890
- HOGENOM:   HBG692690
- OMA:   KTEEFVA
- ProtClustDB:   CLSK936271
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18220; Mature: 18220

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x14517620)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHEPRFWSAVAFVLFFVLFGKKLWTPLAAALDSRADRIRADLDEAARLRREAEQMLEDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRERETAMVEARALVEHSLIEAARIADEARREAEAVATRREQMARDRIAASERSAVREVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVAIDVAIQATRDVLATALPAGADHAIVDRAIADLPSALSHRAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MLHEPRFWSAVAFVLFFVLFGKKLWTPLAAALDSRADRIRADLDEAARLRREAEQMLEDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRERETAMVEARALVEHSLIEAARIADEARREAEAVATRREQMARDRIAASERSAVREVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVAIDVAIQATRDVLATALPAGADHAIVDRAIADLPSALSHRAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA