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The map label for this gene is araC [C]

Identifier: 162146962

GI number: 162146962

Start: 1165684

End: 1166601

Strand: Direct

Name: araC [C]

Synonym: GDI_1167

Alternate gene names: 162146962

Gene position: 1165684-1166601 (Clockwise)

Preceding gene: 162146960

Following gene: 162146966

Centisome position: 29.55

GC content: 65.9

Gene sequence:

>918_bases
ATGACACAACTGGCCGACCTGACGATCTTTCGCACCCTGCACGATACCGACGCGACGCTGCGCGCGTCGGCCCATGTCGG
CGAAGGGCTGGCCGTTGCCATATGGGACCGCGACGAGGTCGCCCTGACGCGGTACGACACCCCCAACCATCATACGTTGA
GCCTGTACCTGGAACACGGCGAAGGATTCCGGAAAAGGCTTGATCAAGGCTGGAAATGCAGCAATGGCGCGGGAGATTTG
TGCCTGATGCCCGCACGTGCCACCAGCGACTGGGACGTCAGCGGGCCGATCCGGATGTTCCATCTCTATATCGCGCCGCA
CGCTTTCGACCGTGCGACATCCGAAATGTTCGACCTGGACCCCGCCCGCATAAGCCTGCGCGAGGATGCCTATTTCCGCC
ATGCCGGGATCGAGGCGAAAATCCGTTCGGCCATTCTGCCGCGACACTGGGCCCAGCCGGCGGACCGTGTCGCGGTGACA
CAGGCGGGAATGGACCTGCTGTCCTATCTTCTGGCACACATGACCGACCGGCGGCTGGACCTGCCACGACGGGGCGGGCT
ATCGGTCGCGGCCTTCCGCCGGGTCCGCGCCCTGATCGACGCCGAGATGGACCGGGCCCTGTCCATCGACGATCTGGCCA
TGGCCGCGGGGCTGAGCAGCTTTCATTTCGCACGGGCCTTCCGCCAGTCGCATGGCGAGACCCCGCACCAGTTCCTGACG
CGCCTGCGCATCGAACGCGCCCGGCATCTGCTACGCCTGGGCGAATCCCCGAAGCGGATCGCAGGCCTGTGCGGCTTCAG
CAGCCATAGCCACCTGACGGCACGCTTCCGGGCGCTGACCGGCCTGACGCCCAGCGACTATGCCCGCCATTGCGGCCACC
GGACGGATCCGGGACCCGGCGACGATCAGTTGATCTGA

Upstream 100 bases:

>100_bases
CTGCGCTTTGTTGCGATCCGGTTCGCGCGGCCACCTGTCCTGTCCGTGAGGACCCGCTCTATGATACCCTATCCAGTCCC
CACCCCCATGGCCGCTCGCG

Downstream 100 bases:

>100_bases
TCCAGCAGCGGCTGGATTTCGGAGGCCGGACGGGGCCGGCAGATGAAAAAGCCCTGGATTTCGGAACAATTGATCTGCTT
GAGGTAATCGAACTGTTCCT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family Protein; AraC-Family Transcriptional Regulator; Transcriptional Regulator Protein AraC Family; Transcriptional Regulator Protein; AraC Family Regulatory Protein; Transcription Regulator AraC Family; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Helix-Turn-Helix Protein; Transcriptional Regulator AraC; Transcriptional Regulator AraC-Type; HTH-Type Transcriptional Regulator; Transcriptional Activator; Transcriptional Regulatory Protein; Transcriptional Regulator AraC/XylS Family; Xre Family xin-Antitoxin System Antitoxin Component; HTH-Type Transcriptional Regulator ChbR; L-Rhamnose Operon Transcriptional Activator RhaR; AraC-Type Trancriptional Regulator; AraC Family Helix-Turn-Helix Transcriptional Regulator; Transcription Regulator; AraC Family Regulatory Helix-Turn-Helix; Two Component AraC Family Transcriptional Regulator; Xyls/AraC-Type Transcriptional Activator

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTQLADLTIFRTLHDTDATLRASAHVGEGLAVAIWDRDEVALTRYDTPNHHTLSLYLEHGEGFRKRLDQGWKCSNGAGDL
CLMPARATSDWDVSGPIRMFHLYIAPHAFDRATSEMFDLDPARISLREDAYFRHAGIEAKIRSAILPRHWAQPADRVAVT
QAGMDLLSYLLAHMTDRRLDLPRRGGLSVAAFRRVRALIDAEMDRALSIDDLAMAAGLSSFHFARAFRQSHGETPHQFLT
RLRIERARHLLRLGESPKRIAGLCGFSSHSHLTARFRALTGLTPSDYARHCGHRTDPGPGDDQLI

Sequences:

>Translated_305_residues
MTQLADLTIFRTLHDTDATLRASAHVGEGLAVAIWDRDEVALTRYDTPNHHTLSLYLEHGEGFRKRLDQGWKCSNGAGDL
CLMPARATSDWDVSGPIRMFHLYIAPHAFDRATSEMFDLDPARISLREDAYFRHAGIEAKIRSAILPRHWAQPADRVAVT
QAGMDLLSYLLAHMTDRRLDLPRRGGLSVAAFRRVRALIDAEMDRALSIDDLAMAAGLSSFHFARAFRQSHGETPHQFLT
RLRIERARHLLRLGESPKRIAGLCGFSSHSHLTARFRALTGLTPSDYARHCGHRTDPGPGDDQLI
>Mature_304_residues
TQLADLTIFRTLHDTDATLRASAHVGEGLAVAIWDRDEVALTRYDTPNHHTLSLYLEHGEGFRKRLDQGWKCSNGAGDLC
LMPARATSDWDVSGPIRMFHLYIAPHAFDRATSEMFDLDPARISLREDAYFRHAGIEAKIRSAILPRHWAQPADRVAVTQ
AGMDLLSYLLAHMTDRRLDLPRRGGLSVAAFRRVRALIDAEMDRALSIDDLAMAAGLSSFHFARAFRQSHGETPHQFLTR
LRIERARHLLRLGESPKRIAGLCGFSSHSHLTARFRALTGLTPSDYARHCGHRTDPGPGDDQLI

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34190; Mature: 34059

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLADLTIFRTLHDTDATLRASAHVGEGLAVAIWDRDEVALTRYDTPNHHTLSLYLEHG
CCCHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEEECC
EGFRKRLDQGWKCSNGAGDLCLMPARATSDWDVSGPIRMFHLYIAPHAFDRATSEMFDLD
CHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCC
PARISLREDAYFRHAGIEAKIRSAILPRHWAQPADRVAVTQAGMDLLSYLLAHMTDRRLD
HHHEEECCCHHHHHCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
LPRRGGLSVAAFRRVRALIDAEMDRALSIDDLAMAAGLSSFHFARAFRQSHGETPHQFLT
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH
RLRIERARHLLRLGESPKRIAGLCGFSSHSHLTARFRALTGLTPSDYARHCGHRTDPGPG
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
DDQLI
CCCCC
>Mature Secondary Structure 
TQLADLTIFRTLHDTDATLRASAHVGEGLAVAIWDRDEVALTRYDTPNHHTLSLYLEHG
CCHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEEEECC
EGFRKRLDQGWKCSNGAGDLCLMPARATSDWDVSGPIRMFHLYIAPHAFDRATSEMFDLD
CHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCC
PARISLREDAYFRHAGIEAKIRSAILPRHWAQPADRVAVTQAGMDLLSYLLAHMTDRRLD
HHHEEECCCHHHHHCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
LPRRGGLSVAAFRRVRALIDAEMDRALSIDDLAMAAGLSSFHFARAFRQSHGETPHQFLT
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH
RLRIERARHLLRLGESPKRIAGLCGFSSHSHLTARFRALTGLTPSDYARHCGHRTDPGPG
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
DDQLI
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA