| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yfeW [H]
Identifier: 162146952
GI number: 162146952
Start: 1152892
End: 1154064
Strand: Direct
Name: yfeW [H]
Synonym: GDI_1157
Alternate gene names: 162146952
Gene position: 1152892-1154064 (Clockwise)
Preceding gene: 162146951
Following gene: 162146953
Centisome position: 29.23
GC content: 70.08
Gene sequence:
>1173_bases ATGACAGACGCCATGACGGATCTTGGCCGCCGGACGATCCTGCGGGCGATGGTCGCGGCCGGAGGCGCGGGACTGGCCGC CGGATGCGCCGCCGCCCCCGCCCGCCCGTTCGCCCCGGTCGACCGGCTGGTGGACCGTGCGATCGCGGACAGGCAGATTC CCGGCGCGGTCGTCGTCATCGCGCATGGCGGGGCGATCGTCCATCACCAAGCCTATGGTAGGCGTGCCCTGCTGCCCACG GCAGAGCCGCTGGACGAGGGCACGCTGTACGACATGGCGTCGCTGACCAAGCCGGTGGCGACCACGGTCGCGGCCATGCA GTTCTTCGAGGCCGGGGCCTTCCGGCTGGACGACCCGGTCTGCCGGTACCTGCCGGATTTCGCACGCAACGGCAAAGCGG ACATCACGATCCGCCACCTGCTGACCCATTATTCGGGCCTGCCGCCCGACCTGGACCTGTCCACATCCTGGACCGGCAAG GACGAAGCCGTGCGCCGCGTGATGGACACGCGCCCCGACCACCCGGCGGGCGAGCGGTTCGTCTACAGCGACATCAATTT CATCACGGTGGGGCTTCTGGTCGAACATCTGTCGCACCAGCCCCTGGACCGCACCGTGCAGGAACGCGTGCTGGACCCGC TGGGCATGACCCATTCGCGCTTCCTGCCCCCCGCCGCATGGCGCCCCGCCATTGCGCCGACCCAGTTCGATGCGGACGGG GTCATGCTGCGCGGAATCGTCCACGACCCGACGGCGCGGCGGATGGGCGGCGTGGCGGGCCATGCCGGCCTGTTCTCCAA CGCCGCCGACATGAGCATCTACGCCCAGGCGCTGCTGGACCGGCGGGCCGGACGGCCCAGCGCCTATCCGCTGAAGCCCG AAACCCTGGTATTGATGACCACGCCCCAGCAGCCCGCCGGCAAGCCGGACCTGCGCGGCATCGGGTGGGACATCCGCACC CATTATTCCACGCCGCGCGGCGATATCTTCCCCGTGGGCTCGTTCGGCCATACCGGATTCACCGGCACGTCGCTGTGGAT GGACCCGGCCAGCGACAGTTTCGTGCTGATCCTGACCAACCGGGTGCACCCCAGCGGCGGCGGCGGCCGCGGCATCGTGC GCCTGCGCCACGATGTCGCCACCGAAGCCGCGCGAATCCTGCTGGCGACGTAA
Upstream 100 bases:
>100_bases TGGTCCCGATCGGCGTGGCGGCCAGCCTGGCGATCGGCGGCGCCTGCCGCCTGCGCCCGGACCCCATCCCCACCGACCAG CCGACGGAGCGGCCGACACC
Downstream 100 bases:
>100_bases CGGGCCCCGGTCACGCAGTGTTTTGCGCCCGCCCGGCATCCCGCGACGACGCTGGCGCGTAACACCGCCATACCCGCCAC GACGGAGATCCGGCATGGCC
Product: beta-lactamase/acylhydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTDAMTDLGRRTILRAMVAAGGAGLAAGCAAAPARPFAPVDRLVDRAIADRQIPGAVVVIAHGGAIVHHQAYGRRALLPT AEPLDEGTLYDMASLTKPVATTVAAMQFFEAGAFRLDDPVCRYLPDFARNGKADITIRHLLTHYSGLPPDLDLSTSWTGK DEAVRRVMDTRPDHPAGERFVYSDINFITVGLLVEHLSHQPLDRTVQERVLDPLGMTHSRFLPPAAWRPAIAPTQFDADG VMLRGIVHDPTARRMGGVAGHAGLFSNAADMSIYAQALLDRRAGRPSAYPLKPETLVLMTTPQQPAGKPDLRGIGWDIRT HYSTPRGDIFPVGSFGHTGFTGTSLWMDPASDSFVLILTNRVHPSGGGGRGIVRLRHDVATEAARILLAT
Sequences:
>Translated_390_residues MTDAMTDLGRRTILRAMVAAGGAGLAAGCAAAPARPFAPVDRLVDRAIADRQIPGAVVVIAHGGAIVHHQAYGRRALLPT AEPLDEGTLYDMASLTKPVATTVAAMQFFEAGAFRLDDPVCRYLPDFARNGKADITIRHLLTHYSGLPPDLDLSTSWTGK DEAVRRVMDTRPDHPAGERFVYSDINFITVGLLVEHLSHQPLDRTVQERVLDPLGMTHSRFLPPAAWRPAIAPTQFDADG VMLRGIVHDPTARRMGGVAGHAGLFSNAADMSIYAQALLDRRAGRPSAYPLKPETLVLMTTPQQPAGKPDLRGIGWDIRT HYSTPRGDIFPVGSFGHTGFTGTSLWMDPASDSFVLILTNRVHPSGGGGRGIVRLRHDVATEAARILLAT >Mature_389_residues TDAMTDLGRRTILRAMVAAGGAGLAAGCAAAPARPFAPVDRLVDRAIADRQIPGAVVVIAHGGAIVHHQAYGRRALLPTA EPLDEGTLYDMASLTKPVATTVAAMQFFEAGAFRLDDPVCRYLPDFARNGKADITIRHLLTHYSGLPPDLDLSTSWTGKD EAVRRVMDTRPDHPAGERFVYSDINFITVGLLVEHLSHQPLDRTVQERVLDPLGMTHSRFLPPAAWRPAIAPTQFDADGV MLRGIVHDPTARRMGGVAGHAGLFSNAADMSIYAQALLDRRAGRPSAYPLKPETLVLMTTPQQPAGKPDLRGIGWDIRTH YSTPRGDIFPVGSFGHTGFTGTSLWMDPASDSFVLILTNRVHPSGGGGRGIVRLRHDVATEAARILLAT
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0214 family [H]
Homologues:
Organism=Escherichia coli, GI87082101, Length=401, Percent_Identity=30.9226932668329, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1790593, Length=244, Percent_Identity=26.6393442622951, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786574, Length=298, Percent_Identity=24.8322147651007, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR022849 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 42004; Mature: 41872
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAMTDLGRRTILRAMVAAGGAGLAAGCAAAPARPFAPVDRLVDRAIADRQIPGAVVVI CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE AHGGAIVHHQAYGRRALLPTAEPLDEGTLYDMASLTKPVATTVAAMQFFEAGAFRLDDPV ECCCEEEEEHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH CRYLPDFARNGKADITIRHLLTHYSGLPPDLDLSTSWTGKDEAVRRVMDTRPDHPAGERF HHHCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEE VYSDINFITVGLLVEHLSHQPLDRTVQERVLDPLGMTHSRFLPPAAWRPAIAPTQFDADG EECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCC VMLRGIVHDPTARRMGGVAGHAGLFSNAADMSIYAQALLDRRAGRPSAYPLKPETLVLMT EEEEEEECCCHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE TPQQPAGKPDLRGIGWDIRTHYSTPRGDIFPVGSFGHTGFTGTSLWMDPASDSFVLILTN CCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCEEEEEEC RVHPSGGGGRGIVRLRHDVATEAARILLAT CCCCCCCCCCCEEEEHHHHHHHHHHHEECC >Mature Secondary Structure TDAMTDLGRRTILRAMVAAGGAGLAAGCAAAPARPFAPVDRLVDRAIADRQIPGAVVVI CCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE AHGGAIVHHQAYGRRALLPTAEPLDEGTLYDMASLTKPVATTVAAMQFFEAGAFRLDDPV ECCCEEEEEHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH CRYLPDFARNGKADITIRHLLTHYSGLPPDLDLSTSWTGKDEAVRRVMDTRPDHPAGERF HHHCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEE VYSDINFITVGLLVEHLSHQPLDRTVQERVLDPLGMTHSRFLPPAAWRPAIAPTQFDADG EECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCC VMLRGIVHDPTARRMGGVAGHAGLFSNAADMSIYAQALLDRRAGRPSAYPLKPETLVLMT EEEEEEECCCHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE TPQQPAGKPDLRGIGWDIRTHYSTPRGDIFPVGSFGHTGFTGTSLWMDPASDSFVLILTN CCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCEEEEEEC RVHPSGGGGRGIVRLRHDVATEAARILLAT CCCCCCCCCCCEEEEHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]