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The map label for this gene is yrbE [C]

Identifier: 162146934

GI number: 162146934

Start: 1131602

End: 1132387

Strand: Reverse

Name: yrbE [C]

Synonym: GDI_1139

Alternate gene names: 162146934

Gene position: 1132387-1131602 (Counterclockwise)

Preceding gene: 162146936

Following gene: 162146933

Centisome position: 28.71

GC content: 68.19

Gene sequence:

>786_bases
GTGAACGCCGTTCTCGACTTCATAGCGGCGCTGGGGCGTGCCGCGCTGAATCTGGTCCGGACCGCCGGGGCCCTGACCCT
GTTCGGGGCGCAGGCCCTGTCGCATCTGGTGCGTCCCCCGTTCTACTGGCGCATCTTCTTCGGCGCGCTGGTTGAAATCG
GTTTCTTTTCCCTGCCCGTGGTCGCGCTGACGGCGCTGTTCTCGGGCGGGGTGATCGCCCTGCAATCCTATACCGGCTTC
GCCCAGTACCATGTGCAAAGCGCCATTGCCGGCATCGTCGTGCTGGCCGTCACGCGCGAACTGGGCCCGGTGCTGGCCGG
GTTGATGGTGGCGGGGCGCGTCGGGGCCGCGATGGCGGCCGAAATCGGCACGATGCGCGTGACCGACCAGATCGACGCGC
TGACCACGCTGTCGACCAACCCGATGAAGTACCTGGTGACGCCCCGCCTGCTGGCCGGCACCCTGGCGCTGCCGTGCCTG
GTGCTGGTGGCCGATATCCTGGGCGTGCTGGGCGGCTTTACGGTGTCGGTGGCCAAGCTCGATTTCTCGGCCCCGGTCTA
TATCGCCGCGACCTTCGCGGCGGTGAAGCCGATCGACGTCACGGTCGGGCTGGTGAAGGCGGGGGTCTTCGGCTTCCTGA
TCGCGCTGATGGGCTGCTATCACGGCTATAACAGCCGGGGCGGCGCCGAGGGCGTGGGGGCCGCCACCACGGCGGCGGTG
GTCGCGGCGTCGATCCTGCTGCTGGCCTCCGACTACCTCCTGACCGACGTGTTCTTCTCGCAATGA

Upstream 100 bases:

>100_bases
GGACCCGTCCTTTGACGTGCCGGTCTTCCCGCGCTACGGCAGGAACCATGTCCGATCGACTTGCCAGATTTTTTCGCGCG
GGCTGCCCGCGATATCCCGC

Downstream 100 bases:

>100_bases
CCGACGCCGCACCCAAGATCCGCATTCGCGGCCTGCGCAAGGCGTTCGGGTCGAAAATCGTCCTGGACGGGATCGACCTG
GATGTCATGCAGGGCACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MNAVLDFIAALGRAALNLVRTAGALTLFGAQALSHLVRPPFYWRIFFGALVEIGFFSLPVVALTALFSGGVIALQSYTGF
AQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMAAEIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTLALPCL
VLVADILGVLGGFTVSVAKLDFSAPVYIAATFAAVKPIDVTVGLVKAGVFGFLIALMGCYHGYNSRGGAEGVGAATTAAV
VAASILLLASDYLLTDVFFSQ

Sequences:

>Translated_261_residues
MNAVLDFIAALGRAALNLVRTAGALTLFGAQALSHLVRPPFYWRIFFGALVEIGFFSLPVVALTALFSGGVIALQSYTGF
AQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMAAEIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTLALPCL
VLVADILGVLGGFTVSVAKLDFSAPVYIAATFAAVKPIDVTVGLVKAGVFGFLIALMGCYHGYNSRGGAEGVGAATTAAV
VAASILLLASDYLLTDVFFSQ
>Mature_261_residues
MNAVLDFIAALGRAALNLVRTAGALTLFGAQALSHLVRPPFYWRIFFGALVEIGFFSLPVVALTALFSGGVIALQSYTGF
AQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMAAEIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTLALPCL
VLVADILGVLGGFTVSVAKLDFSAPVYIAATFAAVKPIDVTVGLVKAGVFGFLIALMGCYHGYNSRGGAEGVGAATTAAV
VAASILLLASDYLLTDVFFSQ

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=264, Percent_Identity=31.0606060606061, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26917; Mature: 26917

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAVLDFIAALGRAALNLVRTAGALTLFGAQALSHLVRPPFYWRIFFGALVEIGFFSLPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VALTALFSGGVIALQSYTGFAQYHVQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMAA
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGTMRVTDQIDALTTLSTNPMKYLVTPRLLAGTLALPCLVLVADILGVLGGFTVSVAKL
HHCCEEEHHHHHHHHHCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEE
DFSAPVYIAATFAAVKPIDVTVGLVKAGVFGFLIALMGCYHGYNSRGGAEGVGAATTAAV
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
VAASILLLASDYLLTDVFFSQ
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA