| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is yigZ [C]
Identifier: 162146931
GI number: 162146931
Start: 1128733
End: 1129353
Strand: Reverse
Name: yigZ [C]
Synonym: GDI_1136
Alternate gene names: 162146931
Gene position: 1129353-1128733 (Counterclockwise)
Preceding gene: 162146932
Following gene: 162146926
Centisome position: 28.63
GC content: 73.59
Gene sequence:
>621_bases ATGAGCGGCAGCCGGGCCGACAGCCAGGCGGGGGGCCGCGTGATGCTGGAAGCCCCCGCCCGGCTGGAGAAGGAGGTCCG CAAGAGCGTGTTCCTGGCCCAGGCGGCGCCCGTCGCGACGCCGGCCGAGGCGCTGGATTTCGTCCGTGCGGTGTCCGTCG CGGATGCCACGCATAACTGCTGGGCCTATCGCATCGGGCAGGATTACCGCAGCGACGATGCCGGCGAACCCGGGGGCACG GCGGGCCGGCCGATCCTGCAGGTGATCGACGGGCAGGGGTTCGACCGGACCGTGGTGGTGGTGACGCGCTGGTTCGGCGG CATCAAGCTGGGGGCGGGGGGGCTGGTCCGCGCCTATGGCGGCACGGCGGCGGAATGCCTGCGCCTGGCGCCCCGGACCC CGATCGTGACCCTGGTCCGGCTGGCATTCCATTGCGGCTTCGCCGACCTGGCCCTGCTGCGCGCCCGGCTGGGGGCGCTG GACGCGGTGGTGGAAGAGGAAGCGTTCGACGCGACGGGGGCGGATCTGGTGGTCGCGGTGCCCGAGGCGCGGATGGACGA GGCGGTGGCGCGGATCGGCGATCTGACGCGGGGGCAGTCGGTGCCCAGGGTGCTGGACTAG
Upstream 100 bases:
>100_bases CCCGCCTGGTCGCGCCGGATGGGCTGCACCTGAATGAAATCGGCCATCTGGGGGATCTGGTGGCCCTGTTCGGCGGCGGG GACGCGGCCGACGACGGGTC
Downstream 100 bases:
>100_bases ACCAGGAACGTGCCCCGTTACTCATGGACCAGGTCCAGGTCCCCGAACCGGGTGAACTCGCCCTCGAAGAACAGATGCAC GGTGCCGGTGGGCCCGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSGSRADSQAGGRVMLEAPARLEKEVRKSVFLAQAAPVATPAEALDFVRAVSVADATHNCWAYRIGQDYRSDDAGEPGGT AGRPILQVIDGQGFDRTVVVVTRWFGGIKLGAGGLVRAYGGTAAECLRLAPRTPIVTLVRLAFHCGFADLALLRARLGAL DAVVEEEAFDATGADLVVAVPEARMDEAVARIGDLTRGQSVPRVLD
Sequences:
>Translated_206_residues MSGSRADSQAGGRVMLEAPARLEKEVRKSVFLAQAAPVATPAEALDFVRAVSVADATHNCWAYRIGQDYRSDDAGEPGGT AGRPILQVIDGQGFDRTVVVVTRWFGGIKLGAGGLVRAYGGTAAECLRLAPRTPIVTLVRLAFHCGFADLALLRARLGAL DAVVEEEAFDATGADLVVAVPEARMDEAVARIGDLTRGQSVPRVLD >Mature_205_residues SGSRADSQAGGRVMLEAPARLEKEVRKSVFLAQAAPVATPAEALDFVRAVSVADATHNCWAYRIGQDYRSDDAGEPGGTA GRPILQVIDGQGFDRTVVVVTRWFGGIKLGAGGLVRAYGGTAAECLRLAPRTPIVTLVRLAFHCGFADLALLRARLGALD AVVEEEAFDATGADLVVAVPEARMDEAVARIGDLTRGQSVPRVLD
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=188, Percent_Identity=35.1063829787234, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 21701; Mature: 21570
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSRADSQAGGRVMLEAPARLEKEVRKSVFLAQAAPVATPAEALDFVRAVSVADATHNC CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC WAYRIGQDYRSDDAGEPGGTAGRPILQVIDGQGFDRTVVVVTRWFGGIKLGAGGLVRAYG EEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCEEECCCCEEEECC GTAAECLRLAPRTPIVTLVRLAFHCGFADLALLRARLGALDAVVEEEAFDATGADLVVAV CCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC PEARMDEAVARIGDLTRGQSVPRVLD CCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SGSRADSQAGGRVMLEAPARLEKEVRKSVFLAQAAPVATPAEALDFVRAVSVADATHNC CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC WAYRIGQDYRSDDAGEPGGTAGRPILQVIDGQGFDRTVVVVTRWFGGIKLGAGGLVRAYG EEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCEEECCCCEEEECC GTAAECLRLAPRTPIVTLVRLAFHCGFADLALLRARLGALDAVVEEEAFDATGADLVVAV CCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC PEARMDEAVARIGDLTRGQSVPRVLD CCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454544; 8313894 [H]