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The map label for this gene is ucpA [C]

Identifier: 162146926

GI number: 162146926

Start: 1122841

End: 1123680

Strand: Reverse

Name: ucpA [C]

Synonym: GDI_1131

Alternate gene names: 162146926

Gene position: 1123680-1122841 (Counterclockwise)

Preceding gene: 162146931

Following gene: 162146925

Centisome position: 28.49

GC content: 73.93

Gene sequence:

>840_bases
ATGAAACAGGATACGATTCTTATCACCGGTGCTTCGTCGGGTATCGGTCGGGCCATCGCGCTGGCGCTGGCGGCTCCGGG
CGTGGTGCTTCATCTGGGCGGGCGCGATGCCGGGCGGCTGGATGCGGTCGCGCGGGCCTGCGCGGACCGCGGGGCGCGGG
CGCAGACCCGGCGGCAGGATGTCCGCGACCAGGATGGCATGGCGCGCTGGATCGGCGATGCCGGGCCGCTGGACCTGGTC
TTCGCCTGCGCGGGCATCACCGCCTCCACCGCGCGGCCCGCCGGCGGGGGCGCCCCGCGCGAACCGGACGGGCAGGTCCG
GCGCATCATGGATGTCAATGTGGGGGGCGTGGTGAACACCGTGCTGCCGGCCCTGGCAACGATGGGCCGGCAGGCGCGCG
ACCCGCTGGGCGTGCGGGGGCGCATCTGCGCCATTGCCTCGGTCGCGGGGTATGTCTCGTTTCCCGGCACGCCGTCCTAT
TGCGCGTCCAAGGCGGCGGTGGACCGGTTCATGGTCGCGACCGGCGGCAACACGGCCCGCGACGGCATCCTGCTGTCCAG
CGTCTGCTGCGGCTTCGTCCGCACGCCGATGGTGGCGGCCAACCGCTTTCCCATGCCCGGGCTGGTCGAAGCCGGCGACG
CGGCGGCGGCGATCCTGCGCGGGGTGGCGGCGGGGCGGCGGCGCATCGCCTTTCCCTGGTGGCTGGCGGCCGGGTCGCGC
CTGATGGACCGGCTGCCCCTGCGCTGGGCCGAGGCCTATTACGCCCGCCAGCCGGCGGGCCAGGCCGGGTCGATGCCGGA
AACCGGGGGCATGGCTTCCTTCACGGGCGACTTGCCATAA

Upstream 100 bases:

>100_bases
GGCTGTGCGTCATCGGCGGCGTGTCCTTGGGTCCTGAACCGGTCCGCGCCGGCCGCGCGGATTTGCGGTCTTTTATCAGG
AGGTCTCTATTCTGGCGAAT

Downstream 100 bases:

>100_bases
CCGGTCCGATTACGCGACGATCGCGGTGATACGCTCTCGAGGAGCCGCATCCGTTGCCGATGTCGTTTTTGCGTCCGCCC
GTCATGGAGGAGTTCGGTGC

Product: short-chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKQDTILITGASSGIGRAIALALAAPGVVLHLGGRDAGRLDAVARACADRGARAQTRRQDVRDQDGMARWIGDAGPLDLV
FACAGITASTARPAGGGAPREPDGQVRRIMDVNVGGVVNTVLPALATMGRQARDPLGVRGRICAIASVAGYVSFPGTPSY
CASKAAVDRFMVATGGNTARDGILLSSVCCGFVRTPMVAANRFPMPGLVEAGDAAAAILRGVAAGRRRIAFPWWLAAGSR
LMDRLPLRWAEAYYARQPAGQAGSMPETGGMASFTGDLP

Sequences:

>Translated_279_residues
MKQDTILITGASSGIGRAIALALAAPGVVLHLGGRDAGRLDAVARACADRGARAQTRRQDVRDQDGMARWIGDAGPLDLV
FACAGITASTARPAGGGAPREPDGQVRRIMDVNVGGVVNTVLPALATMGRQARDPLGVRGRICAIASVAGYVSFPGTPSY
CASKAAVDRFMVATGGNTARDGILLSSVCCGFVRTPMVAANRFPMPGLVEAGDAAAAILRGVAAGRRRIAFPWWLAAGSR
LMDRLPLRWAEAYYARQPAGQAGSMPETGGMASFTGDLP
>Mature_279_residues
MKQDTILITGASSGIGRAIALALAAPGVVLHLGGRDAGRLDAVARACADRGARAQTRRQDVRDQDGMARWIGDAGPLDLV
FACAGITASTARPAGGGAPREPDGQVRRIMDVNVGGVVNTVLPALATMGRQARDPLGVRGRICAIASVAGYVSFPGTPSY
CASKAAVDRFMVATGGNTARDGILLSSVCCGFVRTPMVAANRFPMPGLVEAGDAAAAILRGVAAGRRRIAFPWWLAAGSR
LMDRLPLRWAEAYYARQPAGQAGSMPETGGMASFTGDLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17538182, Length=195, Percent_Identity=28.2051282051282, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=208, Percent_Identity=29.3269230769231, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI23397609, Length=202, Percent_Identity=31.1881188118812, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24644339, Length=199, Percent_Identity=30.6532663316583, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17737361, Length=204, Percent_Identity=30.3921568627451, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21357041, Length=205, Percent_Identity=29.2682926829268, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571526, Length=202, Percent_Identity=29.7029702970297, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28788; Mature: 28788

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDTILITGASSGIGRAIALALAAPGVVLHLGGRDAGRLDAVARACADRGARAQTRRQD
CCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHH
VRDQDGMARWIGDAGPLDLVFACAGITASTARPAGGGAPREPDGQVRRIMDVNVGGVVNT
CCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCHHHHH
VLPALATMGRQARDPLGVRGRICAIASVAGYVSFPGTPSYCASKAAVDRFMVATGGNTAR
HHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHEEEECCCCCHH
DGILLSSVCCGFVRTPMVAANRFPMPGLVEAGDAAAAILRGVAAGRRRIAFPWWLAAGSR
HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCHHHHHHHHH
LMDRLPLRWAEAYYARQPAGQAGSMPETGGMASFTGDLP
HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQDTILITGASSGIGRAIALALAAPGVVLHLGGRDAGRLDAVARACADRGARAQTRRQD
CCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHH
VRDQDGMARWIGDAGPLDLVFACAGITASTARPAGGGAPREPDGQVRRIMDVNVGGVVNT
CCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCHHHHH
VLPALATMGRQARDPLGVRGRICAIASVAGYVSFPGTPSYCASKAAVDRFMVATGGNTAR
HHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHEEEECCCCCHH
DGILLSSVCCGFVRTPMVAANRFPMPGLVEAGDAAAAILRGVAAGRRRIAFPWWLAAGSR
HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCHHHHHHHHH
LMDRLPLRWAEAYYARQPAGQAGSMPETGGMASFTGDLP
HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]