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The map label for this gene is trbC

Identifier: 162146836

GI number: 162146836

Start: 1033397

End: 1033714

Strand: Reverse

Name: trbC

Synonym: GDI_1018

Alternate gene names: NA

Gene position: 1033714-1033397 (Counterclockwise)

Preceding gene: 162146837

Following gene: 162146835

Centisome position: 26.21

GC content: 61.64

Gene sequence:

>318_bases
ATGATTGTCCTGCGCCATCGCTTTGCTGTGGCTGGCGCCACCCTCTCGCTCGCCCTGCTGTCGGCCCCGGCCTATGCCGC
CGGTTCGAGCATGCCTTGGGAGGAGCCGCTCAACCAGATCCTGGAAAGTGTGCAGGGGCCGGTCGCCAAGATCATCTCGG
TGATCATCATCACCGTGACCGGTCTGACCCTGGCCTTTGGGGAAACATCCGGTGGCTTCCGCCGCCTGATCCAGATCGTC
TTTGGTCTGTCGATCGCTTTTGCCGCGTCCAGCTTTTTCCTGTCCTTCTTTTCCTTCTCGGGCGGGGCGCTGATCTGA

Upstream 100 bases:

>100_bases
GCGGCAGCGCGCGCCGGCTGACTGAACTCGCCACCGTCCAGGGCCTGAGCCCCGATGGAGACTACATCCTCGCACCTGCC
GGAGACCCGTCATGACCCGC

Downstream 100 bases:

>100_bases
TGGAGCCGGACAGCATCCCTGGCTTCACCGCGCCGGTGCATCGCGCCCTGATCGAGCCGATCCTGCTCGGCGGCGCACCG
CGCACGGTGGCGATCGTCAA

Product: conjugal transfer protein TrbC

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MIVLRHRFAVAGATLSLALLSAPAYAAGSSMPWEEPLNQILESVQGPVAKIISVIIITVTGLTLAFGETSGGFRRLIQIV
FGLSIAFAASSFFLSFFSFSGGALI

Sequences:

>Translated_105_residues
MIVLRHRFAVAGATLSLALLSAPAYAAGSSMPWEEPLNQILESVQGPVAKIISVIIITVTGLTLAFGETSGGFRRLIQIV
FGLSIAFAASSFFLSFFSFSGGALI
>Mature_105_residues
MIVLRHRFAVAGATLSLALLSAPAYAAGSSMPWEEPLNQILESVQGPVAKIISVIIITVTGLTLAFGETSGGFRRLIQIV
FGLSIAFAASSFFLSFFSFSGGALI

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11008; Mature: 11008

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLRHRFAVAGATLSLALLSAPAYAAGSSMPWEEPLNQILESVQGPVAKIISVIIITVT
CEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GLTLAFGETSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI
HHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIVLRHRFAVAGATLSLALLSAPAYAAGSSMPWEEPLNQILESVQGPVAKIISVIIITVT
CEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GLTLAFGETSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALI
HHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA