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The map label for this gene is 162146774

Identifier: 162146774

GI number: 162146774

Start: 973409

End: 973900

Strand: Direct

Name: 162146774

Synonym: GDI_0955

Alternate gene names: NA

Gene position: 973409-973900 (Clockwise)

Preceding gene: 162146772

Following gene: 162146777

Centisome position: 24.68

GC content: 55.69

Gene sequence:

>492_bases
ATGCTGACCGATAACGGCACGCATTTTACCGATCCGGCCGGCAATGGATGGACACCCGAAGACATCAAGGCCATGCGGGC
GGATGGTGTCCTGTTCCGGTGCCACTCTTTTGAACTGGCCTGTGCTGATCTCGATATCGAGCATCGACTGACAAAGCCGC
GACATCCCTGGACGAATGGCCAGGTCGAGAGGATGAACCGCACGATCAAGGACGCCACCGTCAAGCGCTTCTACTACGAA
ACACATGACCAGTTGCGTCAACACCTCGCCGACTTCGTTACCGCCTACAATTTCGCCCGCAGGCTCAAGACCCTGCGCGG
CCTCACTCCATATGAATTCATTTGTCAGCAGTGGGAAAAAGAACCATCACGGTTCATACATAATCCGCACCACCAAATCC
CGGGACCAAACATTTGCGGGCGGCGTCACGTTGCCTTTGGCCAGCAGATACGCGCTCTCGTGTTCATACCGGAGAAACCG
GGAAGAGGATGA

Upstream 100 bases:

>100_bases
TTGTCCAATTGCGTTAGAAAGCGACACGTCGCGTTGCCGGTGACTTCCTTTGTGCTCTGGCCGCTGCGGCTTCCCTACGG
CTCCCAACCGCATCCATACC

Downstream 100 bases:

>100_bases
ATAGGACTTGCGAAAGACGATATGCCCGACCATGCGGAACCCGGCCGCCTTCCAGGCATCCGCGAAGAGGTCAATGCGGT
TCCATCCATAGAACGAAACC

Product: transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Integrase; Integrase Protein; Integrase Catalytic Core; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Hypothethical Protein Transposase; Instegrase; Integrase Catalytic Domain-Containing Protein; Transposase Of

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEHRLTKPRHPWTNGQVERMNRTIKDATVKRFYYE
THDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHNPHHQIPGPNICGRRHVAFGQQIRALVFIPEKP
GRG

Sequences:

>Translated_163_residues
MLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEHRLTKPRHPWTNGQVERMNRTIKDATVKRFYYE
THDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHNPHHQIPGPNICGRRHVAFGQQIRALVFIPEKP
GRG
>Mature_163_residues
MLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEHRLTKPRHPWTNGQVERMNRTIKDATVKRFYYE
THDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHNPHHQIPGPNICGRRHVAFGQQIRALVFIPEKP
GRG

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19020; Mature: 19020

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEHRLTKPRHPWTNG
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEECCCCHHHHCCCCCCCCCCC
QVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EPSRFIHNPHHQIPGPNICGRRHVAFGQQIRALVFIPEKPGRG
CHHHHHCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCC
>Mature Secondary Structure
MLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEHRLTKPRHPWTNG
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEECCCCHHHHCCCCCCCCCCC
QVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EPSRFIHNPHHQIPGPNICGRRHVAFGQQIRALVFIPEKPGRG
CHHHHHCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA