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The map label for this gene is yubM [H]

Identifier: 162146772

GI number: 162146772

Start: 970241

End: 972298

Strand: Direct

Name: yubM [H]

Synonym: GDI_0953

Alternate gene names: 162146772

Gene position: 970241-972298 (Clockwise)

Preceding gene: 162146768

Following gene: 162146774

Centisome position: 24.6

GC content: 65.26

Gene sequence:

>2058_bases
ATGGCGAGCGCCATCCAGAAAATCGCCCTTAATGCGTCCCGTGATATTCCTTTCAACAGGCTGGTGCTGTCGCAGTCCAA
CGTGCGGCGTGTGAAGGCCGGCCTGTCGATCGAGGAACTGGCCCGGGACATCGAACGTCGCGGGTTGCTCCAGAGCCTCA
ACGTCCGCCCCGTCCTGAACGGGGAGGGGGCAGAAACCGGCGCCTATGAAGTGCCGGCCGGCGGCCGCCGGTTCCGCGCT
CTCGAACTTCTGGTGAAGCAGAAGAAATTGGTGAAGACGGCCCCAGTGCCCTGTGTCGTGCGCGAGGCCGGCTCGACCAT
TCTCGCCGAGGATGATTCCCTGGCCGAGAACGTCCAACGCGTGGCCCTGCATCCGCTGGATCAGTTCCGCGCCTTTCGCG
ACATGCTGGAGAAGGGCATGTCCGAGGAAGAAATCGCTGCCGCGTTCTTCGTCGTGCCGGCCGTGGTGAAGCAGCGCCTG
CGCCTGATGACCGTTTCGGACAAGCTGCTTGAGATCTATGAGCAGGATGGCATGAAGCTCGACCAGCTCATGGCCTTTTC
GATCAGCGATGACCACACCCGTCAGGAACAGGTCTGGGAGATTATTGCCCAGAGCCATAACCGCGAGCCCTATCTGATCC
GCCGCATGCTGACGGAGAAGACCGTGCGGGCATCGGATCGCCGCGTGCGTTTCGTTGGGCTGGAGGCTTATCTGGCGGCA
GGCGGCCACGTCATGCGTGACCTGTTCGAGGCTGACGATGGCGGCTGGCTGCAGGATCCGGCGCTGCTCGACCGGCTGGT
GATGGAAAAACTGACCGGGGCAGCGGAAGACATCCGTGCCGAAGGCTGGAAATGGGTCGAGACGGCCCTGTCTTTCCCCT
GGGGGCACACGCGGGACTTCGTGGAGATCGAGGGCACGCCTGTTGCGCTTTCGGAGGAAGAAGCCGGCCGTCTAATCGCG
CTGCATAGCGAGCAGGAGGCCATCGAGGCGGAATACGCGCAGGCCGATGAGTTCCCGGAGGAAATCGACGCGCGCCTCGG
TGAAATCGAGCAGGCCATCGAGGCGCTGGAGGAACGCCCGGTATCCTTCGATCCGGTAGACATGGAGCGAGCAGGCGCCT
TTGTCAGCCTGGATACCGACGGCACGTTGCTGGTCGAGCGGGGCTTCGTCCGGCCGGAAGATGTGCCGGCGGAGCCCGAG
GACGGCCACGATGCATCCGAAGGTGATGACGACGCGGTCGTCTGTCACAGCGCGGGTGACGACGGCGAAGGGGGCCTACG
GGAAAGTGGTCCGGACGCCGAGCCCGAGGAGGAAGACGGACTGAAGCCGCTGTCCGATCGCCTGCTGACGGAACTGACGG
CCTGGCGCACGCTGGCGTTGCGGGATGCGTTCGCCGCCAATCCGCATATCGCGCTGACCGAACTGCTGCACACGCTGGTG
CGCGACCTGTACTGGCAGGTGTCGAGCGTGGACTGCCTGGAAGCCTATGTCCGGGAAATCCCGCTGCGGGTCCATTCCCC
CGACATGCCCGGCAGCCTTCCAGCCCACGCGCTGCGCCAGCGCAACGAGGGCTGGAAGCACGATCTGCCGGAGGACGAGG
ATGCACTCTGGCAGTGGCTCGACCGGATGGACGACACCAGTCGCCTGGCTCTGCTGGCGCATTGCCTGTCCTTCGGGATC
AACGCGCTGCATGAATCGTCCCATGGTCCGTCTCTGGCACGCAGCGTCAGGGAGCGGCTGGCTCGCGCCGACCGTCTCGC
CACTGCGCTCACGCTCGACCTGGCCGAAGCGGGCTGGCAGGCGACAGTGGAGAACTATCTTGGCCGCGTCACCAAGGCGC
GTATCCTCGAAGCCGTGCGTGAGGCGCGGGGCGACGAGGCCGCCGACCGCATCGCCCATCTGAAAAAGGCCGACATGGCA
CAGGCGGCCGAAAGGCTGCTTGAGGGCAGCGGTTGGCTGCCCGAGGCTCTGCGGACGGCGCATGCGCCGGAGCGAACTGA
AAGGGAAGAAGGGGCGGCGCGCATGACCGACAGTCCTGATGCGGTCGCCGCCGAGTGA

Upstream 100 bases:

>100_bases
TCTGGTGGGGCCGGAAGAGAGGAAGAGGGACGTGGGGTTTTCGTGACGGATTCAGGGGTGGGAGAGAGGCTTCCGCCCGT
CCGTCACGGAGTGTTCCGCC

Downstream 100 bases:

>100_bases
GATCTATTGTTGAGTATCATGGGCGGCTTCCGGTCTTCGGGAGCCGCCTTTTGTATTGGACGAGACTGTCTCCGGACGCA
CCCGCGCTAGCGGACGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 685; Mature: 684

Protein sequence:

>685_residues
MASAIQKIALNASRDIPFNRLVLSQSNVRRVKAGLSIEELARDIERRGLLQSLNVRPVLNGEGAETGAYEVPAGGRRFRA
LELLVKQKKLVKTAPVPCVVREAGSTILAEDDSLAENVQRVALHPLDQFRAFRDMLEKGMSEEEIAAAFFVVPAVVKQRL
RLMTVSDKLLEIYEQDGMKLDQLMAFSISDDHTRQEQVWEIIAQSHNREPYLIRRMLTEKTVRASDRRVRFVGLEAYLAA
GGHVMRDLFEADDGGWLQDPALLDRLVMEKLTGAAEDIRAEGWKWVETALSFPWGHTRDFVEIEGTPVALSEEEAGRLIA
LHSEQEAIEAEYAQADEFPEEIDARLGEIEQAIEALEERPVSFDPVDMERAGAFVSLDTDGTLLVERGFVRPEDVPAEPE
DGHDASEGDDDAVVCHSAGDDGEGGLRESGPDAEPEEEDGLKPLSDRLLTELTAWRTLALRDAFAANPHIALTELLHTLV
RDLYWQVSSVDCLEAYVREIPLRVHSPDMPGSLPAHALRQRNEGWKHDLPEDEDALWQWLDRMDDTSRLALLAHCLSFGI
NALHESSHGPSLARSVRERLARADRLATALTLDLAEAGWQATVENYLGRVTKARILEAVREARGDEAADRIAHLKKADMA
QAAERLLEGSGWLPEALRTAHAPERTEREEGAARMTDSPDAVAAE

Sequences:

>Translated_685_residues
MASAIQKIALNASRDIPFNRLVLSQSNVRRVKAGLSIEELARDIERRGLLQSLNVRPVLNGEGAETGAYEVPAGGRRFRA
LELLVKQKKLVKTAPVPCVVREAGSTILAEDDSLAENVQRVALHPLDQFRAFRDMLEKGMSEEEIAAAFFVVPAVVKQRL
RLMTVSDKLLEIYEQDGMKLDQLMAFSISDDHTRQEQVWEIIAQSHNREPYLIRRMLTEKTVRASDRRVRFVGLEAYLAA
GGHVMRDLFEADDGGWLQDPALLDRLVMEKLTGAAEDIRAEGWKWVETALSFPWGHTRDFVEIEGTPVALSEEEAGRLIA
LHSEQEAIEAEYAQADEFPEEIDARLGEIEQAIEALEERPVSFDPVDMERAGAFVSLDTDGTLLVERGFVRPEDVPAEPE
DGHDASEGDDDAVVCHSAGDDGEGGLRESGPDAEPEEEDGLKPLSDRLLTELTAWRTLALRDAFAANPHIALTELLHTLV
RDLYWQVSSVDCLEAYVREIPLRVHSPDMPGSLPAHALRQRNEGWKHDLPEDEDALWQWLDRMDDTSRLALLAHCLSFGI
NALHESSHGPSLARSVRERLARADRLATALTLDLAEAGWQATVENYLGRVTKARILEAVREARGDEAADRIAHLKKADMA
QAAERLLEGSGWLPEALRTAHAPERTEREEGAARMTDSPDAVAAE
>Mature_684_residues
ASAIQKIALNASRDIPFNRLVLSQSNVRRVKAGLSIEELARDIERRGLLQSLNVRPVLNGEGAETGAYEVPAGGRRFRAL
ELLVKQKKLVKTAPVPCVVREAGSTILAEDDSLAENVQRVALHPLDQFRAFRDMLEKGMSEEEIAAAFFVVPAVVKQRLR
LMTVSDKLLEIYEQDGMKLDQLMAFSISDDHTRQEQVWEIIAQSHNREPYLIRRMLTEKTVRASDRRVRFVGLEAYLAAG
GHVMRDLFEADDGGWLQDPALLDRLVMEKLTGAAEDIRAEGWKWVETALSFPWGHTRDFVEIEGTPVALSEEEAGRLIAL
HSEQEAIEAEYAQADEFPEEIDARLGEIEQAIEALEERPVSFDPVDMERAGAFVSLDTDGTLLVERGFVRPEDVPAEPED
GHDASEGDDDAVVCHSAGDDGEGGLRESGPDAEPEEEDGLKPLSDRLLTELTAWRTLALRDAFAANPHIALTELLHTLVR
DLYWQVSSVDCLEAYVREIPLRVHSPDMPGSLPAHALRQRNEGWKHDLPEDEDALWQWLDRMDDTSRLALLAHCLSFGIN
ALHESSHGPSLARSVRERLARADRLATALTLDLAEAGWQATVENYLGRVTKARILEAVREARGDEAADRIAHLKKADMAQ
AAERLLEGSGWLPEALRTAHAPERTEREEGAARMTDSPDAVAAE

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 76184; Mature: 76053

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAIQKIALNASRDIPFNRLVLSQSNVRRVKAGLSIEELARDIERRGLLQSLNVRPVLN
CCHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEC
GEGAETGAYEVPAGGRRFRALELLVKQKKLVKTAPVPCVVREAGSTILAEDDSLAENVQR
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCHHHHHHHHH
VALHPLDQFRAFRDMLEKGMSEEEIAAAFFVVPAVVKQRLRLMTVSDKLLEIYEQDGMKL
HHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DQLMAFSISDDHTRQEQVWEIIAQSHNREPYLIRRMLTEKTVRASDRRVRFVGLEAYLAA
HHHHEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHC
GGHVMRDLFEADDGGWLQDPALLDRLVMEKLTGAAEDIRAEGWKWVETALSFPWGHTRDF
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCCCCCE
VEIEGTPVALSEEEAGRLIALHSEQEAIEAEYAQADEFPEEIDARLGEIEQAIEALEERP
EEECCCCEEECCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
VSFDPVDMERAGAFVSLDTDGTLLVERGFVRPEDVPAEPEDGHDASEGDDDAVVCHSAGD
CCCCCCCHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
DGEGGLRESGPDAEPEEEDGLKPLSDRLLTELTAWRTLALRDAFAANPHIALTELLHTLV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RDLYWQVSSVDCLEAYVREIPLRVHSPDMPGSLPAHALRQRNEGWKHDLPEDEDALWQWL
HHHHHHHCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH
DRMDDTSRLALLAHCLSFGINALHESSHGPSLARSVRERLARADRLATALTLDLAEAGWQ
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ATVENYLGRVTKARILEAVREARGDEAADRIAHLKKADMAQAAERLLEGSGWLPEALRTA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
HAPERTEREEGAARMTDSPDAVAAE
CCCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASAIQKIALNASRDIPFNRLVLSQSNVRRVKAGLSIEELARDIERRGLLQSLNVRPVLN
CHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEC
GEGAETGAYEVPAGGRRFRALELLVKQKKLVKTAPVPCVVREAGSTILAEDDSLAENVQR
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCHHHHHHHHH
VALHPLDQFRAFRDMLEKGMSEEEIAAAFFVVPAVVKQRLRLMTVSDKLLEIYEQDGMKL
HHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DQLMAFSISDDHTRQEQVWEIIAQSHNREPYLIRRMLTEKTVRASDRRVRFVGLEAYLAA
HHHHEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHC
GGHVMRDLFEADDGGWLQDPALLDRLVMEKLTGAAEDIRAEGWKWVETALSFPWGHTRDF
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCCCCCE
VEIEGTPVALSEEEAGRLIALHSEQEAIEAEYAQADEFPEEIDARLGEIEQAIEALEERP
EEECCCCEEECCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
VSFDPVDMERAGAFVSLDTDGTLLVERGFVRPEDVPAEPEDGHDASEGDDDAVVCHSAGD
CCCCCCCHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
DGEGGLRESGPDAEPEEEDGLKPLSDRLLTELTAWRTLALRDAFAANPHIALTELLHTLV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RDLYWQVSSVDCLEAYVREIPLRVHSPDMPGSLPAHALRQRNEGWKHDLPEDEDALWQWL
HHHHHHHCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH
DRMDDTSRLALLAHCLSFGINALHESSHGPSLARSVRERLARADRLATALTLDLAEAGWQ
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ATVENYLGRVTKARILEAVREARGDEAADRIAHLKKADMAQAAERLLEGSGWLPEALRTA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
HAPERTEREEGAARMTDSPDAVAAE
CCCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]