| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is otsB [H]
Identifier: 162146737
GI number: 162146737
Start: 928324
End: 929082
Strand: Direct
Name: otsB [H]
Synonym: GDI_0915
Alternate gene names: 162146737
Gene position: 928324-929082 (Clockwise)
Preceding gene: 162146736
Following gene: 162146738
Centisome position: 23.54
GC content: 68.91
Gene sequence:
>759_bases ATGACCCCGACGGACTATGCCGGCCCGGCCGGCCGTTTCATGCCCCCCCCGCACGAAGCCGCCCTGCTGCTGGATTTCGA CGGCACGCTGGTCGATATCGCGCCCACGCCCGACTCGGTGGTGGTTCCGCCTGACCTGCTGGACGTGCTGCGGCAGCTGC GGGCAAAATGCGGCGATGCGCTGGCGGTGATTTCGGGCCGGGCCGTGGACCAGATCGATCGTTTCCTGGGTGACGTGCCT TTCGCCGTCGCGGGTGAACACGGGATCGCGGTACGGCATCGGCCGGACGGACCGATCGTGCGCGCCGACCTGCCGCATGT GCCCTCGACCTGGCTGCAGGCGGCGGAAACCCTGGCCGCGGCGCATCCGGGCGTACGGATCGAAACCAAGGTCGCGGGGT TCGTCCTGCATTATCGCGCGGCGCCCGAAACGGCCGACCTGCTGCGCGAGGCAGCAGAAACCTGGGTCGCACCCAGCAAT GGGGCGTTCCATATCCAGGCCGCCAAGATGGCATGGGAAATCCGTCCCCACGGCGTGGACAAGGGCCATGCGGTCGCGGA ACTGATGCAGTCGCCGCCCTTTGCCGGCCGGCATCCGATCTTCATCGGTGACGACGTGACGGACGAGGACGGCATTCGCC AGGCCGCCGCGCTGGGCGGCGTGGGGTTCCGCATCCCCAGGGATTTCCCCGATCCCGCCGCCTTCCGGGCCTGGCTGGCG ACTCTGGCGAAAGGGGGGAACGATTCATGGGGCGTCTGA
Upstream 100 bases:
>100_bases CCAATCCCTGCTTCCGCCCTGATGGCGGAGGCAGCAACCTCGGTCCGCGCGGCCGGTTCGGGATGAATGCCGTCCCATCT ACGCAAGGAGTGAGACGCCC
Downstream 100 bases:
>100_bases TCATCGTATCGAACCGGGTTCCATCCCCGCGCGAACGCACGCAGCCCGCCGGTGGGCTGACGGTCGGGCTGAAGGATGCG CTGCGCGGCGGTTCGTCGCT
Product: trehalose-phosphatase
Products: NA
Alternate protein names: TPP; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTPTDYAGPAGRFMPPPHEAALLLDFDGTLVDIAPTPDSVVVPPDLLDVLRQLRAKCGDALAVISGRAVDQIDRFLGDVP FAVAGEHGIAVRHRPDGPIVRADLPHVPSTWLQAAETLAAAHPGVRIETKVAGFVLHYRAAPETADLLREAAETWVAPSN GAFHIQAAKMAWEIRPHGVDKGHAVAELMQSPPFAGRHPIFIGDDVTDEDGIRQAAALGGVGFRIPRDFPDPAAFRAWLA TLAKGGNDSWGV
Sequences:
>Translated_252_residues MTPTDYAGPAGRFMPPPHEAALLLDFDGTLVDIAPTPDSVVVPPDLLDVLRQLRAKCGDALAVISGRAVDQIDRFLGDVP FAVAGEHGIAVRHRPDGPIVRADLPHVPSTWLQAAETLAAAHPGVRIETKVAGFVLHYRAAPETADLLREAAETWVAPSN GAFHIQAAKMAWEIRPHGVDKGHAVAELMQSPPFAGRHPIFIGDDVTDEDGIRQAAALGGVGFRIPRDFPDPAAFRAWLA TLAKGGNDSWGV >Mature_251_residues TPTDYAGPAGRFMPPPHEAALLLDFDGTLVDIAPTPDSVVVPPDLLDVLRQLRAKCGDALAVISGRAVDQIDRFLGDVPF AVAGEHGIAVRHRPDGPIVRADLPHVPSTWLQAAETLAAAHPGVRIETKVAGFVLHYRAAPETADLLREAAETWVAPSNG AFHIQAAKMAWEIRPHGVDKGHAVAELMQSPPFAGRHPIFIGDDVTDEDGIRQAAALGGVGFRIPRDFPDPAAFRAWLAT LAKGGNDSWGV
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=208, Percent_Identity=39.4230769230769, Blast_Score=130, Evalue=8e-32, Organism=Drosophila melanogaster, GI19920676, Length=230, Percent_Identity=31.7391304347826, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI221473368, Length=233, Percent_Identity=28.3261802575107, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI20129307, Length=233, Percent_Identity=28.3261802575107, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24582490, Length=233, Percent_Identity=28.3261802575107, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 26834; Mature: 26702
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTDYAGPAGRFMPPPHEAALLLDFDGTLVDIAPTPDSVVVPPDLLDVLRQLRAKCGDA CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCEEECHHHHHHHHHHHHHHCCE LAVISGRAVDQIDRFLGDVPFAVAGEHGIAVRHRPDGPIVRADLPHVPSTWLQAAETLAA EEECCCCCHHHHHHHHCCCCEEEECCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH AHPGVRIETKVAGFVLHYRAAPETADLLREAAETWVAPSNGAFHIQAAKMAWEIRPHGVD CCCCCEEEEEHEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCC KGHAVAELMQSPPFAGRHPIFIGDDVTDEDGIRQAAALGGVGFRIPRDFPDPAAFRAWLA CHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH TLAKGGNDSWGV HHHCCCCCCCCC >Mature Secondary Structure TPTDYAGPAGRFMPPPHEAALLLDFDGTLVDIAPTPDSVVVPPDLLDVLRQLRAKCGDA CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCEEECHHHHHHHHHHHHHHCCE LAVISGRAVDQIDRFLGDVPFAVAGEHGIAVRHRPDGPIVRADLPHVPSTWLQAAETLAA EEECCCCCHHHHHHHHCCCCEEEECCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH AHPGVRIETKVAGFVLHYRAAPETADLLREAAETWVAPSNGAFHIQAAKMAWEIRPHGVD CCCCCEEEEEHEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCC KGHAVAELMQSPPFAGRHPIFIGDDVTDEDGIRQAAALGGVGFRIPRDFPDPAAFRAWLA CHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH TLAKGGNDSWGV HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]