Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is yjeS [H]

Identifier: 162146700

GI number: 162146700

Start: 894522

End: 895595

Strand: Direct

Name: yjeS [H]

Synonym: GDI_0878

Alternate gene names: 162146700

Gene position: 894522-895595 (Clockwise)

Preceding gene: 162146699

Following gene: 162146701

Centisome position: 22.68

GC content: 70.86

Gene sequence:

>1074_bases
ATGGAGGGCGGCCTGCCGCCCGGAAGAGCTGCCATCCTGCGCGATGCGATTCGCGACAGGGCCCTGGCGCTGGGGTTCGA
TGCGGTGGGCTTCTGCGAGGCCGCGCTGGGGGACGAGGCCCGGGCGCGGCTGGCCGATTTCCTGGCGGCCGGGCATCACG
GGTCCATGGGCTGGCTGGCCGAGCGGTCGGCGCAGCGCGGCGACCCGCGCGCCTTGTGGCCCGAGGCGCGCAGCGTGATC
GCGCTGGGCCTGTCCTACGCGCCCGGCACGGACGCGCTGGCCACCGTGGGCCGGGCGGATCGGGGCAATATCTCGGTCTA
TGCGCGCAATCGCGACTATCACGATGTGGTCAAGGGCATGCTGAAGCATGTGGCGCAGTTCGTAGTGGCCGAGGGCGCGC
GCGCGGGCGCCGCGACCGGGGTCAAGGTTTTCGTCGATACCGCCCCGGTGCTGGAAAAGCCGCTGGCCGAACGGGCGGGC
CTGGGCTGGCAGGGCAAGCACACCAACCTGGTGTCCCGCCGTCACGGAAGCTGGCTGCTTCTGGGTGAAATCTATACGAC
CCTGGCCCTGCCGCGCACCGACCCGTCGGGCGGGGGGTGCGGCACTTGCCGCCGCTGCCTGGACGCATGCCCGACCAACG
CGTTCCCCGAACCCTACCGGATGGATGCGCGGCGGTGCATTTCCTACCTGACGATCGAAAATCCCGGCCCGATCCCGCTG
GAATTCCGGGCGGCGATGGGCAACCGGATCTATGGTTGCGATGATTGCCTGGCCGTATGCCCGTGGAACCGCTTCGCCAC
CGCGTCGCGGCAGATGAAGCTGCAGGCCCGCGACGACCTGACGGCGCCTCGGTTGGGGGCGCTGGCCCGGCTGGACGATG
CGGCGTTTCGCGCCCTGTTCTCCGGTTCGCCGGTCAAGCGGATCGGCCGCGACCGCTTCGTGCGTAATGTGCTGGTCGCC
ATCGGCAATTCGGGGCTGGCGGCCCTGCGCCCGGTGGCGCAGGATCTGTGCGGCGATCCCGACCCGGTGGTGGCCGAGGC
CGCGCGTTGGGCCGTGGAACGGTTGCCGTCATGA

Upstream 100 bases:

>100_bases
GCACGCTGGGTGCCCACGCCGCCGGATTGCGCGCCGAATGGGCCATGGAAGACTGGACGCCCGACGAGATGCCGCCCCCC
GACCTTCCCCCGGTCCCGTG

Downstream 100 bases:

>100_bases
CGGGCGACCGGATCCTGGTCAAGCGTAGCCTGGTCCTGTCCGGCCATCGCACCAGCGTGGCGCTGGAGCCCGAATTCTGG
TCGGCTCTGGAGGAGATGGC

Product: electron transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MEGGLPPGRAAILRDAIRDRALALGFDAVGFCEAALGDEARARLADFLAAGHHGSMGWLAERSAQRGDPRALWPEARSVI
ALGLSYAPGTDALATVGRADRGNISVYARNRDYHDVVKGMLKHVAQFVVAEGARAGAATGVKVFVDTAPVLEKPLAERAG
LGWQGKHTNLVSRRHGSWLLLGEIYTTLALPRTDPSGGGCGTCRRCLDACPTNAFPEPYRMDARRCISYLTIENPGPIPL
EFRAAMGNRIYGCDDCLAVCPWNRFATASRQMKLQARDDLTAPRLGALARLDDAAFRALFSGSPVKRIGRDRFVRNVLVA
IGNSGLAALRPVAQDLCGDPDPVVAEAARWAVERLPS

Sequences:

>Translated_357_residues
MEGGLPPGRAAILRDAIRDRALALGFDAVGFCEAALGDEARARLADFLAAGHHGSMGWLAERSAQRGDPRALWPEARSVI
ALGLSYAPGTDALATVGRADRGNISVYARNRDYHDVVKGMLKHVAQFVVAEGARAGAATGVKVFVDTAPVLEKPLAERAG
LGWQGKHTNLVSRRHGSWLLLGEIYTTLALPRTDPSGGGCGTCRRCLDACPTNAFPEPYRMDARRCISYLTIENPGPIPL
EFRAAMGNRIYGCDDCLAVCPWNRFATASRQMKLQARDDLTAPRLGALARLDDAAFRALFSGSPVKRIGRDRFVRNVLVA
IGNSGLAALRPVAQDLCGDPDPVVAEAARWAVERLPS
>Mature_357_residues
MEGGLPPGRAAILRDAIRDRALALGFDAVGFCEAALGDEARARLADFLAAGHHGSMGWLAERSAQRGDPRALWPEARSVI
ALGLSYAPGTDALATVGRADRGNISVYARNRDYHDVVKGMLKHVAQFVVAEGARAGAATGVKVFVDTAPVLEKPLAERAG
LGWQGKHTNLVSRRHGSWLLLGEIYTTLALPRTDPSGGGCGTCRRCLDACPTNAFPEPYRMDARRCISYLTIENPGPIPL
EFRAAMGNRIYGCDDCLAVCPWNRFATASRQMKLQARDDLTAPRLGALARLDDAAFRALFSGSPVKRIGRDRFVRNVLVA
IGNSGLAALRPVAQDLCGDPDPVVAEAARWAVERLPS

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=341, Percent_Identity=39.5894428152493, Blast_Score=260, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 38308; Mature: 38308

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGGLPPGRAAILRDAIRDRALALGFDAVGFCEAALGDEARARLADFLAAGHHGSMGWLA
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHH
ERSAQRGDPRALWPEARSVIALGLSYAPGTDALATVGRADRGNISVYARNRDYHDVVKGM
HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHH
LKHVAQFVVAEGARAGAATGVKVFVDTAPVLEKPLAERAGLGWQGKHTNLVSRRHGSWLL
HHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEE
LGEIYTTLALPRTDPSGGGCGTCRRCLDACPTNAFPEPYRMDARRCISYLTIENPGPIPL
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCCCE
EFRAAMGNRIYGCDDCLAVCPWNRFATASRQMKLQARDDLTAPRLGALARLDDAAFRALF
EEHHHHCCCCCCCCHHHHHCCCHHHHHHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHH
SGSPVKRIGRDRFVRNVLVAIGNSGLAALRPVAQDLCGDPDPVVAEAARWAVERLPS
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEGGLPPGRAAILRDAIRDRALALGFDAVGFCEAALGDEARARLADFLAAGHHGSMGWLA
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHH
ERSAQRGDPRALWPEARSVIALGLSYAPGTDALATVGRADRGNISVYARNRDYHDVVKGM
HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHH
LKHVAQFVVAEGARAGAATGVKVFVDTAPVLEKPLAERAGLGWQGKHTNLVSRRHGSWLL
HHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEE
LGEIYTTLALPRTDPSGGGCGTCRRCLDACPTNAFPEPYRMDARRCISYLTIENPGPIPL
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCCCE
EFRAAMGNRIYGCDDCLAVCPWNRFATASRQMKLQARDDLTAPRLGALARLDDAAFRALF
EEHHHHCCCCCCCCHHHHHCCCHHHHHHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHH
SGSPVKRIGRDRFVRNVLVAIGNSGLAALRPVAQDLCGDPDPVVAEAARWAVERLPS
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]