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The map label for this gene is 162146677

Identifier: 162146677

GI number: 162146677

Start: 870264

End: 872048

Strand: Direct

Name: 162146677

Synonym: GDI_0855

Alternate gene names: NA

Gene position: 870264-872048 (Clockwise)

Preceding gene: 162146676

Following gene: 162146678

Centisome position: 22.06

GC content: 63.25

Gene sequence:

>1785_bases
ATGGCGAATATCACGATGAAATCCGTCGATGCGGTGGTGGTCGGCGGTGGTTGGGCCGGGTCGATCATGGCCAAGGAACT
GACCGAGGCCGGACTGAATGTCGTCATGCTGGAACGCGGCGCCGACCGCAGCACGGCCAGCGACGGCGCCTATCCCGGTT
CGATCGACGAACTGCAGGGCAATTTCCGTCACAAGATCTTCCAGGATCTCTCCCGCAGCTCGGTGACGATCCGCAACAAT
TCCAGCCAGACCGCACTGCCTTATCGTCAGATGGCCGCGTTCCTGCCGGGCGAGGGGGTCGGGGGCGCCGGCCTGCACTG
GTCGGGCGTGCATTTCCGCATGCCGCCGGACGACCTGATCCTGCGCAGCAAGGTCAAGGAAAAATACGGCGAGAAATTCA
TCCCCGAAGGCATGAACCTTCAGGATTACGGCGTCACCTATGACGAACTGGAACCGTTCTTCGACAAGGCCGAGAAAGTC
TTCGGCACGTCGGGCGAGGCCTATACCGTCAACGGGCAGGTCGTCGGCAAGGGGAATGTCTTCGCGCCGTCGCGTTCCGA
CCATTTCCCGCTGCCGGCGCTGAAGGACGTGTATGGCGCCAGCCTGTTCCGCCGCGCGGCAGCGGAAGTCGGGTTCCATC
CTTATGCGATGCCGGCGGCGAATGCCTCGGCGCAATATACCAATTCGTACGGCGTGCAGATGGGGCCGTGCAATTTCTGC
GGATATTGCAGCGGCTATGCCTGCTACATGTATTCGAAGGCCTCGCCGAACGTGAATATCCTGCCGGTGCTGCGCACCGA
TCCGAAATTCCAGTTGCGCGACCGCGCGCACGTCCTGCGTGTCGAGCTCGACAGTACCAAAAAGCAGGCGACGGGCGTCA
CCTACCTGGACAGCAATGGCGATACGGTGTTCCAGCCCGCCGACCTGGTCGTCGTCGCGGCGTTCCAGTTCCACAACGTG
CATCTGATGCTGCTGTCGGGGATCGGCAAGCCCTACGACCCGGTGGCGAACGAGGGCGTGGTGGGGCGCAATTTCGTCTA
CCAGAACGTCACCACCACCACGGCGTGGCTCGACAAATCGGTTTATACCAAACAGTTTATCGGAACCGGCGGCGGCGGCG
TCGCCTTCGACGATTTCAACAGCGAGAATTTCGACCACGGGCCGCTGGGCTTCGTCGGCGGGTCGCCCGTGTGGGTGAAC
CAGGCCGGCATCAAGGCCATCGCCGCCGCCAAAAGTGGCGGTCCGCCGGGCACGCCACGTTGGGGGTCGGCGTGGAAGAA
GGCCATGGTCGATACCTACCGGCATTCGGTCCGCATGGATGCGCACGGGTCCAACATGGCCTATCGCGACGTGTATCTGG
ACCTGGACCCGACATGGAAGGACGCGTACGGCCTGCCCCTGCTGCGCATGACCTTCGACTGGAAGGACAATGACATCCGC
ATGAACCGGTACGTCGTCGGCCAGATTGCCAAGGTGACCCGGGCGATGGGCGCGCGCGACGTGCATTTCGGCCAGCGGCA
GCCGGACGAGCATTTCGACACGCGCTATTACCAGACGACGCACCTGGCCGGTGGCGCCGTCATGGGCGCCGACCCGAAGA
CCAGCGCGCTGAACCGCTATCTGCAAAGCTGGGACGTGTCCAACGTGTTCGTCATCGGCGCCAACGCCTTCCCGCAGGGA
ACGGGCTACAACCCCACGGGCATGGTGGCGGCCCTGGCCTACTGGTCGGCGTATCATATCCGCACGACCTACCTGAAGAA
CCCCGGCCCGCTGGTGCAGATCTGA

Upstream 100 bases:

>100_bases
GGCTTCCCCGGTGCCCGCGCCGATTTCATGGACTGGGTCGACCAGTACGGGAAGGAATATCCGCTCGGCACCGTCTCGAT
TTCCGGCGAGACGGCCTGAC

Downstream 100 bases:

>100_bases
TGGGGTATCGTAAGCGGGCCGGCCTGGCGGCCCTGTTCGGCGGCCTGGCGGCGTTGGCGTTCCCGGTTGCCGCCACCCCC
GCCCGGGCCCAGGTCCAGGC

Product: gluconate 2-dehydrogenase flavoprotein

Products: NA

Alternate protein names: GA 2-DH dehydrogenase subunit; GADH dehydrogenase subunit [H]

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MANITMKSVDAVVVGGGWAGSIMAKELTEAGLNVVMLERGADRSTASDGAYPGSIDELQGNFRHKIFQDLSRSSVTIRNN
SSQTALPYRQMAAFLPGEGVGGAGLHWSGVHFRMPPDDLILRSKVKEKYGEKFIPEGMNLQDYGVTYDELEPFFDKAEKV
FGTSGEAYTVNGQVVGKGNVFAPSRSDHFPLPALKDVYGASLFRRAAAEVGFHPYAMPAANASAQYTNSYGVQMGPCNFC
GYCSGYACYMYSKASPNVNILPVLRTDPKFQLRDRAHVLRVELDSTKKQATGVTYLDSNGDTVFQPADLVVVAAFQFHNV
HLMLLSGIGKPYDPVANEGVVGRNFVYQNVTTTTAWLDKSVYTKQFIGTGGGGVAFDDFNSENFDHGPLGFVGGSPVWVN
QAGIKAIAAAKSGGPPGTPRWGSAWKKAMVDTYRHSVRMDAHGSNMAYRDVYLDLDPTWKDAYGLPLLRMTFDWKDNDIR
MNRYVVGQIAKVTRAMGARDVHFGQRQPDEHFDTRYYQTTHLAGGAVMGADPKTSALNRYLQSWDVSNVFVIGANAFPQG
TGYNPTGMVAALAYWSAYHIRTTYLKNPGPLVQI

Sequences:

>Translated_594_residues
MANITMKSVDAVVVGGGWAGSIMAKELTEAGLNVVMLERGADRSTASDGAYPGSIDELQGNFRHKIFQDLSRSSVTIRNN
SSQTALPYRQMAAFLPGEGVGGAGLHWSGVHFRMPPDDLILRSKVKEKYGEKFIPEGMNLQDYGVTYDELEPFFDKAEKV
FGTSGEAYTVNGQVVGKGNVFAPSRSDHFPLPALKDVYGASLFRRAAAEVGFHPYAMPAANASAQYTNSYGVQMGPCNFC
GYCSGYACYMYSKASPNVNILPVLRTDPKFQLRDRAHVLRVELDSTKKQATGVTYLDSNGDTVFQPADLVVVAAFQFHNV
HLMLLSGIGKPYDPVANEGVVGRNFVYQNVTTTTAWLDKSVYTKQFIGTGGGGVAFDDFNSENFDHGPLGFVGGSPVWVN
QAGIKAIAAAKSGGPPGTPRWGSAWKKAMVDTYRHSVRMDAHGSNMAYRDVYLDLDPTWKDAYGLPLLRMTFDWKDNDIR
MNRYVVGQIAKVTRAMGARDVHFGQRQPDEHFDTRYYQTTHLAGGAVMGADPKTSALNRYLQSWDVSNVFVIGANAFPQG
TGYNPTGMVAALAYWSAYHIRTTYLKNPGPLVQI
>Mature_593_residues
ANITMKSVDAVVVGGGWAGSIMAKELTEAGLNVVMLERGADRSTASDGAYPGSIDELQGNFRHKIFQDLSRSSVTIRNNS
SQTALPYRQMAAFLPGEGVGGAGLHWSGVHFRMPPDDLILRSKVKEKYGEKFIPEGMNLQDYGVTYDELEPFFDKAEKVF
GTSGEAYTVNGQVVGKGNVFAPSRSDHFPLPALKDVYGASLFRRAAAEVGFHPYAMPAANASAQYTNSYGVQMGPCNFCG
YCSGYACYMYSKASPNVNILPVLRTDPKFQLRDRAHVLRVELDSTKKQATGVTYLDSNGDTVFQPADLVVVAAFQFHNVH
LMLLSGIGKPYDPVANEGVVGRNFVYQNVTTTTAWLDKSVYTKQFIGTGGGGVAFDDFNSENFDHGPLGFVGGSPVWVNQ
AGIKAIAAAKSGGPPGTPRWGSAWKKAMVDTYRHSVRMDAHGSNMAYRDVYLDLDPTWKDAYGLPLLRMTFDWKDNDIRM
NRYVVGQIAKVTRAMGARDVHFGQRQPDEHFDTRYYQTTHLAGGAVMGADPKTSALNRYLQSWDVSNVFVIGANAFPQGT
GYNPTGMVAALAYWSAYHIRTTYLKNPGPLVQI

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate. This subunit functions as the dehydrogenase [H]

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 64961; Mature: 64830

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANITMKSVDAVVVGGGWAGSIMAKELTEAGLNVVMLERGADRSTASDGAYPGSIDELQG
CCCCEEECCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHCC
NFRHKIFQDLSRSSVTIRNNSSQTALPYRQMAAFLPGEGVGGAGLHWSGVHFRMPPDDLI
HHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCEEECCEEEECCCHHHH
LRSKVKEKYGEKFIPEGMNLQDYGVTYDELEPFFDKAEKVFGTSGEAYTVNGQVVGKGNV
HHHHHHHHHCHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCE
FAPSRSDHFPLPALKDVYGASLFRRAAAEVGFHPYAMPAANASAQYTNSYGVQMGPCNFC
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEECCCCCC
GYCSGYACYMYSKASPNVNILPVLRTDPKFQLRDRAHVLRVELDSTKKQATGVTYLDSNG
CCCCCEEEEEEECCCCCCEEEEEEECCCCEEECCCEEEEEEEECCCCCHHCCEEEEECCC
DTVFQPADLVVVAAFQFHNVHLMLLSGIGKPYDPVANEGVVGRNFVYQNVTTTTAWLDKS
CEEECCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCEEHHHHHHHH
VYTKQFIGTGGGGVAFDDFNSENFDHGPLGFVGGSPVWVNQAGIKAIAAAKSGGPPGTPR
HHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCC
WGSAWKKAMVDTYRHSVRMDAHGSNMAYRDVYLDLDPTWKDAYGLPLLRMTFDWKDNDIR
HHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEECCCCCCHHCCCEEEEEEECCCCCCEE
MNRYVVGQIAKVTRAMGARDVHFGQRQPDEHFDTRYYQTTHLAGGAVMGADPKTSALNRY
ECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCEEEEEECCCCEEECCCCCHHHHHHH
LQSWDVSNVFVIGANAFPQGTGYNPTGMVAALAYWSAYHIRTTYLKNPGPLVQI
HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCEEEC
>Mature Secondary Structure 
ANITMKSVDAVVVGGGWAGSIMAKELTEAGLNVVMLERGADRSTASDGAYPGSIDELQG
CCCEEECCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHCC
NFRHKIFQDLSRSSVTIRNNSSQTALPYRQMAAFLPGEGVGGAGLHWSGVHFRMPPDDLI
HHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCEEECCEEEECCCHHHH
LRSKVKEKYGEKFIPEGMNLQDYGVTYDELEPFFDKAEKVFGTSGEAYTVNGQVVGKGNV
HHHHHHHHHCHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCE
FAPSRSDHFPLPALKDVYGASLFRRAAAEVGFHPYAMPAANASAQYTNSYGVQMGPCNFC
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEECCCCCC
GYCSGYACYMYSKASPNVNILPVLRTDPKFQLRDRAHVLRVELDSTKKQATGVTYLDSNG
CCCCCEEEEEEECCCCCCEEEEEEECCCCEEECCCEEEEEEEECCCCCHHCCEEEEECCC
DTVFQPADLVVVAAFQFHNVHLMLLSGIGKPYDPVANEGVVGRNFVYQNVTTTTAWLDKS
CEEECCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCEEHHHHHHHH
VYTKQFIGTGGGGVAFDDFNSENFDHGPLGFVGGSPVWVNQAGIKAIAAAKSGGPPGTPR
HHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCC
WGSAWKKAMVDTYRHSVRMDAHGSNMAYRDVYLDLDPTWKDAYGLPLLRMTFDWKDNDIR
HHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEECCCCCCHHCCCEEEEEEECCCCCCEE
MNRYVVGQIAKVTRAMGARDVHFGQRQPDEHFDTRYYQTTHLAGGAVMGADPKTSALNRY
ECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCEEEEEECCCCEEECCCCCHHHHHHH
LQSWDVSNVFVIGANAFPQGTGYNPTGMVAALAYWSAYHIRTTYLKNPGPLVQI
HHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]