Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is 162146676

Identifier: 162146676

GI number: 162146676

Start: 869609

End: 870262

Strand: Direct

Name: 162146676

Synonym: GDI_0854

Alternate gene names: NA

Gene position: 869609-870262 (Clockwise)

Preceding gene: 162146674

Following gene: 162146677

Centisome position: 22.05

GC content: 64.22

Gene sequence:

>654_bases
ATGCAGGGTCTGGCCGGTGCTGCGGCACTGGGTTCGGCCACGCTTCCCGCACGTGCCGCCCGTTCGACCGAACGGTCGTC
CTATACGCCCGGATTTTTTTCGCAACCGGAATGGGCATTCCTGCATGCGGCCTGTGACCGCCTGATCCCCGAGGACGCGG
TCGGTCCCGGGGCGATCGCCCTGGGGGTGCCGGAATTCATCGACCGCCAGATGGAAACACCGTATGCCTACGGAAAGCTG
TGGTACATGCAGGCACCGTTCGTGTCCGGACCGGACAATCTGGGGTACCAGCTTCCCTTCACCCCCCGCGACATCTACCG
CAAGGGCATCGCCGGGGCCGAAGCGTTCGTGAAGGCGAAATACGGTCAGTCGTTCCATGCGCTGGATGCCGCGACGCGCG
ATGTCATCCTGCAGGGGTTCGAGACAGGCGACGTGCGGTTCGGTGACCTGCCGGCCAGCGTCTTCTTCGCGCAGCTTCTG
AACAATACCATGGAAGGGGCGTTCTCCGACCCCATTCACGGTGGAAACAAGGGGCTGGGCGGCTGGACGACGATCGGCTT
CCCCGGTGCCCGCGCCGATTTCATGGACTGGGTCGACCAGTACGGGAAGGAATATCCGCTCGGCACCGTCTCGATTTCCG
GCGAGACGGCCTGA

Upstream 100 bases:

>100_bases
TTCAAAACAAGAATAGATCGTTTTTTGCCCCCCCCGGTGTTCCCCGGAGCTTCGTGATGTCATGACACTTCCCTCGTCCG
ATCCGTCCCGCAGGACGTTC

Downstream 100 bases:

>100_bases
CATGGCGAATATCACGATGAAATCCGTCGATGCGGTGGTGGTCGGCGGTGGTTGGGCCGGGTCGATCATGGCCAAGGAAC
TGACCGAGGCCGGACTGAAT

Product: gluconate 2-dehydrogenase subunit 3

Products: NA

Alternate protein names: GA 2-DH subunit 3; GADH subunit 3 [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MQGLAGAAALGSATLPARAARSTERSSYTPGFFSQPEWAFLHAACDRLIPEDAVGPGAIALGVPEFIDRQMETPYAYGKL
WYMQAPFVSGPDNLGYQLPFTPRDIYRKGIAGAEAFVKAKYGQSFHALDAATRDVILQGFETGDVRFGDLPASVFFAQLL
NNTMEGAFSDPIHGGNKGLGGWTTIGFPGARADFMDWVDQYGKEYPLGTVSISGETA

Sequences:

>Translated_217_residues
MQGLAGAAALGSATLPARAARSTERSSYTPGFFSQPEWAFLHAACDRLIPEDAVGPGAIALGVPEFIDRQMETPYAYGKL
WYMQAPFVSGPDNLGYQLPFTPRDIYRKGIAGAEAFVKAKYGQSFHALDAATRDVILQGFETGDVRFGDLPASVFFAQLL
NNTMEGAFSDPIHGGNKGLGGWTTIGFPGARADFMDWVDQYGKEYPLGTVSISGETA
>Mature_217_residues
MQGLAGAAALGSATLPARAARSTERSSYTPGFFSQPEWAFLHAACDRLIPEDAVGPGAIALGVPEFIDRQMETPYAYGKL
WYMQAPFVSGPDNLGYQLPFTPRDIYRKGIAGAEAFVKAKYGQSFHALDAATRDVILQGFETGDVRFGDLPASVFFAQLL
NNTMEGAFSDPIHGGNKGLGGWTTIGFPGARADFMDWVDQYGKEYPLGTVSISGETA

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate. The role of this subunit in the heterotrimer is not known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 23288; Mature: 23288

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGLAGAAALGSATLPARAARSTERSSYTPGFFSQPEWAFLHAACDRLIPEDAVGPGAIA
CCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEE
LGVPEFIDRQMETPYAYGKLWYMQAPFVSGPDNLGYQLPFTPRDIYRKGIAGAEAFVKAK
ECCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEECCCCHHHHHHHCCCCHHHHHHHH
YGQSFHALDAATRDVILQGFETGDVRFGDLPASVFFAQLLNNTMEGAFSDPIHGGNKGLG
CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GWTTIGFPGARADFMDWVDQYGKEYPLGTVSISGETA
CCEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC
>Mature Secondary Structure
MQGLAGAAALGSATLPARAARSTERSSYTPGFFSQPEWAFLHAACDRLIPEDAVGPGAIA
CCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEE
LGVPEFIDRQMETPYAYGKLWYMQAPFVSGPDNLGYQLPFTPRDIYRKGIAGAEAFVKAK
ECCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEECCCCHHHHHHHCCCCHHHHHHHH
YGQSFHALDAATRDVILQGFETGDVRFGDLPASVFFAQLLNNTMEGAFSDPIHGGNKGLG
CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GWTTIGFPGARADFMDWVDQYGKEYPLGTVSISGETA
CCEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]