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The map label for this gene is yebC [C]

Identifier: 162146620

GI number: 162146620

Start: 817637

End: 818356

Strand: Direct

Name: yebC [C]

Synonym: GDI_0798

Alternate gene names: 162146620

Gene position: 817637-818356 (Clockwise)

Preceding gene: 162146619

Following gene: 162146621

Centisome position: 20.73

GC content: 68.47

Gene sequence:

>720_bases
ATGCATCGCAAGGGCGCGCAGGACGCGCGCCGCGCCCGGCAGTTCGCCAAGGTGATTCGCGAAATCACCGTCGCCGCGCG
GTCCGGCATGCCCGACCCGGCATCCAATCCCCGCCTGCGCGCCGCCATTTCCGCGGCCCGCGAAGTCAACATGCCCAAGG
ACACGGTCGAGCGCGCGATCAAGAAGGCGACCGGCGCCGGCGGCGGTGACGATTATGCCGAGGTCCGGTACGAGGGCTAC
GGCCCGGCCGGCGTCGCCGTGATCGTCGAAGCCCTGACCGACAACCGCAACCGCACGGCCTCGGATGTCCGCGCCGCGTT
CTCGAAGCATGGCGGGTCGCTGGGCGAGACCAATTCGGTGTCCTTCATGTTCACCCGCCTGGGCGTCATCACCTATCCGG
CCGCGGTCGCCACCGAGGACGAGATGCTGGAAGCGGCGATCGAAGCCGGCGCCGAAAACGTCGAAAGCACGGACGAGGGG
CACGAGGTCACATGCCCCGTGGAATCGTTCTTCGCCGTGCGCGACGCGCTGGAAACCCGCTTCGGCGAACCGTCCAGCGC
GAAGTTCGACTGGCGCCCCGGCACCGTCGTGACCCTGGACGAGGACAAGGCGCGCGGCGTGCTGAAGCTGATCGACGTGC
TGGACGAACATGACGACGTCCAGGCGGTCTACGCCAATTTCGACCTGCCCGACGACGTGGCCGAGAGGCTGTCCGCCTGA

Upstream 100 bases:

>100_bases
TGGGTTGATCGGGAGGCCCGTTTTCTCCCGAAAAAAGAAGATTTTGCATACACTTCAGTAGAGACGAGCCATGGCGGGTC
ATTCCCAGTTCAAGAACATC

Downstream 100 bases:

>100_bases
CGCCCGCCACGGGGCCGAATGGACGGATGGTCCGGCTGCTGGGCATCGATCCGGGCCTGCGCTTCACCGGCTGGGGGCTG
GTCGATGTGGACGGCAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MHRKGAQDARRARQFAKVIREITVAARSGMPDPASNPRLRAAISAAREVNMPKDTVERAIKKATGAGGGDDYAEVRYEGY
GPAGVAVIVEALTDNRNRTASDVRAAFSKHGGSLGETNSVSFMFTRLGVITYPAAVATEDEMLEAAIEAGAENVESTDEG
HEVTCPVESFFAVRDALETRFGEPSSAKFDWRPGTVVTLDEDKARGVLKLIDVLDEHDDVQAVYANFDLPDDVAERLSA

Sequences:

>Translated_239_residues
MHRKGAQDARRARQFAKVIREITVAARSGMPDPASNPRLRAAISAAREVNMPKDTVERAIKKATGAGGGDDYAEVRYEGY
GPAGVAVIVEALTDNRNRTASDVRAAFSKHGGSLGETNSVSFMFTRLGVITYPAAVATEDEMLEAAIEAGAENVESTDEG
HEVTCPVESFFAVRDALETRFGEPSSAKFDWRPGTVVTLDEDKARGVLKLIDVLDEHDDVQAVYANFDLPDDVAERLSA
>Mature_239_residues
MHRKGAQDARRARQFAKVIREITVAARSGMPDPASNPRLRAAISAAREVNMPKDTVERAIKKATGAGGGDDYAEVRYEGY
GPAGVAVIVEALTDNRNRTASDVRAAFSKHGGSLGETNSVSFMFTRLGVITYPAAVATEDEMLEAAIEAGAENVESTDEG
HEVTCPVESFFAVRDALETRFGEPSSAKFDWRPGTVVTLDEDKARGVLKLIDVLDEHDDVQAVYANFDLPDDVAERLSA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=243, Percent_Identity=32.5102880658436, Blast_Score=112, Evalue=3e-25,
Organism=Escherichia coli, GI1788171, Length=239, Percent_Identity=47.2803347280335, Blast_Score=203, Evalue=8e-54,
Organism=Escherichia coli, GI1788294, Length=230, Percent_Identity=34.7826086956522, Blast_Score=126, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6321458, Length=178, Percent_Identity=38.7640449438202, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 25774; Mature: 25774

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRKGAQDARRARQFAKVIREITVAARSGMPDPASNPRLRAAISAAREVNMPKDTVERAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
KKATGAGGGDDYAEVRYEGYGPAGVAVIVEALTDNRNRTASDVRAAFSKHGGSLGETNSV
HHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCH
SFMFTRLGVITYPAAVATEDEMLEAAIEAGAENVESTDEGHEVTCPVESFFAVRDALETR
HHHHHHHHHHHCCHHHCCHHHHHHHHHHHCHHCCCCCCCCCEEECCHHHHHHHHHHHHHH
FGEPSSAKFDWRPGTVVTLDEDKARGVLKLIDVLDEHDDVQAVYANFDLPDDVAERLSA
CCCCCCCEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCC
>Mature Secondary Structure
MHRKGAQDARRARQFAKVIREITVAARSGMPDPASNPRLRAAISAAREVNMPKDTVERAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
KKATGAGGGDDYAEVRYEGYGPAGVAVIVEALTDNRNRTASDVRAAFSKHGGSLGETNSV
HHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCH
SFMFTRLGVITYPAAVATEDEMLEAAIEAGAENVESTDEGHEVTCPVESFFAVRDALETR
HHHHHHHHHHHCCHHHCCHHHHHHHHHHHCHHCCCCCCCCCEEECCHHHHHHHHHHHHHH
FGEPSSAKFDWRPGTVVTLDEDKARGVLKLIDVLDEHDDVQAVYANFDLPDDVAERLSA
CCCCCCCEECCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA