| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is yhcP [C]
Identifier: 162146588
GI number: 162146588
Start: 780359
End: 782431
Strand: Reverse
Name: yhcP [C]
Synonym: GDI_0766
Alternate gene names: 162146588
Gene position: 782431-780359 (Counterclockwise)
Preceding gene: 162146595
Following gene: 162146587
Centisome position: 19.84
GC content: 70.48
Gene sequence:
>2073_bases ATGGGGCAGGACGCCGCAAGCGGCGGGGCGGGCATGCGGGCCGGCATCGCGCGCCGGGTCTGGCTGCCTCCCATACTGGC GGGATGGTTTCCCCCCGGCAGCATCGCCTTCTGCCTGCGCACCTGGGCATCGGCCGTGCTGGCCCTGACCGTGGCGTTCT GGATGCAAATCGACTCGCCGGCCAGCGCGGGCGTCACGGTGATGATCCTGTCCCAGCCCCTGCGCGGCCAGATCCTGTCC AAGGCGCTGTATCGCATCGTGGGTACCCTGGTCGGCGCTGCCGTCGCGATCGGGCTGATCGCGGCCTTCGGGCAGGACCG GTTCATGGTGCTGGGGGGGGCCGCGCTGTGGCTGGGGCTGTGCGTGGTCGCCGGCACGCTGGCGCGCGACTTCCGGGCCT ATGGCGCGCTGCTGGCCGGCTATACCGTCGCCATCATCGGAATCGGGTGCATCGACCGGCCTGAAGCGGTGTTCTCGGTC GCGATCTTCCGTGTGTCGGCCATCATGATCGGCATCGTATCGGTCGCGGTGGTCAATGACGTGACGGGCTCGCCCTCCGC ATGGCGCGCCCTGGCGGACCGGCTGCGCCGGGCGGCGGTCGATGTCCGGCGGATCGCCCGCGACGCCGTGGCCGGGCGGG GTATTCCCGACGACGGAAGCTGTGTTGCGCTGGCAGGGACGATCATGGCGCTGACCAGCCAGGTTTCATTCGCGCGGACG GAACTGGCCGACAGCGCGCTGCGCATGACCGGCGCGCGGTCTGCCATGGTCGCGATGCTGGACATGATATCGTGCAGCCG CGCCATCGGCGGCGTCCTGCGCGAGAACGATGTCCGCCCGGCGATCCTGTCGCGGGTGCGGCAGCGCTTCGGCGACGGGA CGCCCTTCACCGGCGCGGACGACGCGCGGGGCGCGCTGGATGCGCTGCTGCGCGTCGAGGACGGCGACGCGCCACCGACC CCGGCCGAGGCCTATCTGATCGAGCGCGCGATGGCGCTGCTGTCCTACGGACGATGGGTCGAGGACGGCATCCGCACGCT GGAGGACGGCCGCGCGGCACCGCGCGTGGCCCGGAACGTGCGCCTCGCCCGGCATCAGGACCCGGTGCTGGCCATGCTGA ACGGCGTGCGCGTGATCGTGGGATTTTCCGCCGCCGCCGCGATCTGCATCCTGTCCGGTCTGCCGGGTTCGACGATGACG CTGGTACAGGTCGCCACCATCCTGACCCTGTCGATCACGACATTCGACACCCGCGCCTTCGGGTTCGGGGCGCTGATCGG CGTGCCGCTGTCCACGCTGTGCGCGCTGGTGCTGGATTACCGCATCCTGCCCTACGGGTCCGACATGGGCTTCCTGGCGC TGATGATCGCGCCGGTGGTGTTCGCGACATGCCTGCTGCTGATCCATCCGCGCCATGCGGCGATCGGGCTGAATTTCGGG GTGTTCTTCTTCATCGTGCTGGGGCTGGACAACATCCAGAACTACGACCCGATGCAGTTCATCGACCGCAATGTCTTCTA CACGCTGTCGGCGGTGATCCTGTTCTTCTCGCTGGTGCTGCTGCCGCCTTCGGCGCGGCGGCGGCGCTTCCGGGTCGCGA TGACGGTGGCGCTGTCGCTGCGGCGGCAGTTCACCGGCCGGGGGGACATCGCCGGCCCGATGCTGATCAGCCGGCAATAT GACCGGCTGATCCAGGCCCGCACCTGGACGGGCCATCTGCCGCCGCACCGGGTCGCCGCCGGGGTGTTCGGCCGCATCGT GTCGATGGGCGACCTGATCGGCGCGCTGGCGCGGGCCCGGCGGCACCTGACGCGGGCCATGATGATTCCACCGGTATCGG ACCTGGCCCGCCAGGGCCTGGACCTGCTGCGGGTGCGCAATGTCCCCGAAAGCGCGCGGCGCATCATGCACCATGCGACG GTGCTGCTGGCCGCGTCCCGCGACCTGCCCCCGGTCGAGCGCGAGATCGTGATCGGCGCCGTATCGGGCCTGTTCGGCGC GGCGCGGCTGCTGGAGCGCAACGTGCGGCTGCTGCGCCATTACGGCATCATCCCCGCGGCGTGGAGGGGCTGA
Upstream 100 bases:
>100_bases TTTGTCGCTATCGTGACACATAGGATGGGCAGCCGGCCGCCATACTTCGCTCCGGCCCACGGATAGGGTCAGGCGGCACG GCGGATAGGGGCAAGGACGT
Downstream 100 bases:
>100_bases GATGGGGCCGACGGTCGATATCGCGGGCGTGCAGGTATCCTCGTTCGTCATCGATGCGGGGCTGGCGGTGCTGACCCTGC TGGTGCTGCGCCCGCTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MGQDAASGGAGMRAGIARRVWLPPILAGWFPPGSIAFCLRTWASAVLALTVAFWMQIDSPASAGVTVMILSQPLRGQILS KALYRIVGTLVGAAVAIGLIAAFGQDRFMVLGGAALWLGLCVVAGTLARDFRAYGALLAGYTVAIIGIGCIDRPEAVFSV AIFRVSAIMIGIVSVAVVNDVTGSPSAWRALADRLRRAAVDVRRIARDAVAGRGIPDDGSCVALAGTIMALTSQVSFART ELADSALRMTGARSAMVAMLDMISCSRAIGGVLRENDVRPAILSRVRQRFGDGTPFTGADDARGALDALLRVEDGDAPPT PAEAYLIERAMALLSYGRWVEDGIRTLEDGRAAPRVARNVRLARHQDPVLAMLNGVRVIVGFSAAAAICILSGLPGSTMT LVQVATILTLSITTFDTRAFGFGALIGVPLSTLCALVLDYRILPYGSDMGFLALMIAPVVFATCLLLIHPRHAAIGLNFG VFFFIVLGLDNIQNYDPMQFIDRNVFYTLSAVILFFSLVLLPPSARRRRFRVAMTVALSLRRQFTGRGDIAGPMLISRQY DRLIQARTWTGHLPPHRVAAGVFGRIVSMGDLIGALARARRHLTRAMMIPPVSDLARQGLDLLRVRNVPESARRIMHHAT VLLAASRDLPPVEREIVIGAVSGLFGAARLLERNVRLLRHYGIIPAAWRG
Sequences:
>Translated_690_residues MGQDAASGGAGMRAGIARRVWLPPILAGWFPPGSIAFCLRTWASAVLALTVAFWMQIDSPASAGVTVMILSQPLRGQILS KALYRIVGTLVGAAVAIGLIAAFGQDRFMVLGGAALWLGLCVVAGTLARDFRAYGALLAGYTVAIIGIGCIDRPEAVFSV AIFRVSAIMIGIVSVAVVNDVTGSPSAWRALADRLRRAAVDVRRIARDAVAGRGIPDDGSCVALAGTIMALTSQVSFART ELADSALRMTGARSAMVAMLDMISCSRAIGGVLRENDVRPAILSRVRQRFGDGTPFTGADDARGALDALLRVEDGDAPPT PAEAYLIERAMALLSYGRWVEDGIRTLEDGRAAPRVARNVRLARHQDPVLAMLNGVRVIVGFSAAAAICILSGLPGSTMT LVQVATILTLSITTFDTRAFGFGALIGVPLSTLCALVLDYRILPYGSDMGFLALMIAPVVFATCLLLIHPRHAAIGLNFG VFFFIVLGLDNIQNYDPMQFIDRNVFYTLSAVILFFSLVLLPPSARRRRFRVAMTVALSLRRQFTGRGDIAGPMLISRQY DRLIQARTWTGHLPPHRVAAGVFGRIVSMGDLIGALARARRHLTRAMMIPPVSDLARQGLDLLRVRNVPESARRIMHHAT VLLAASRDLPPVEREIVIGAVSGLFGAARLLERNVRLLRHYGIIPAAWRG >Mature_689_residues GQDAASGGAGMRAGIARRVWLPPILAGWFPPGSIAFCLRTWASAVLALTVAFWMQIDSPASAGVTVMILSQPLRGQILSK ALYRIVGTLVGAAVAIGLIAAFGQDRFMVLGGAALWLGLCVVAGTLARDFRAYGALLAGYTVAIIGIGCIDRPEAVFSVA IFRVSAIMIGIVSVAVVNDVTGSPSAWRALADRLRRAAVDVRRIARDAVAGRGIPDDGSCVALAGTIMALTSQVSFARTE LADSALRMTGARSAMVAMLDMISCSRAIGGVLRENDVRPAILSRVRQRFGDGTPFTGADDARGALDALLRVEDGDAPPTP AEAYLIERAMALLSYGRWVEDGIRTLEDGRAAPRVARNVRLARHQDPVLAMLNGVRVIVGFSAAAAICILSGLPGSTMTL VQVATILTLSITTFDTRAFGFGALIGVPLSTLCALVLDYRILPYGSDMGFLALMIAPVVFATCLLLIHPRHAAIGLNFGV FFFIVLGLDNIQNYDPMQFIDRNVFYTLSAVILFFSLVLLPPSARRRRFRVAMTVALSLRRQFTGRGDIAGPMLISRQYD RLIQARTWTGHLPPHRVAAGVFGRIVSMGDLIGALARARRHLTRAMMIPPVSDLARQGLDLLRVRNVPESARRIMHHATV LLAASRDLPPVEREIVIGAVSGLFGAARLLERNVRLLRHYGIIPAAWRG
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=528, Percent_Identity=24.8106060606061, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI1787933, Length=155, Percent_Identity=33.5483870967742, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 73969; Mature: 73838
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQDAASGGAGMRAGIARRVWLPPILAGWFPPGSIAFCLRTWASAVLALTVAFWMQIDSP CCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ASAGVTVMILSQPLRGQILSKALYRIVGTLVGAAVAIGLIAAFGQDRFMVLGGAALWLGL CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHH CVVAGTLARDFRAYGALLAGYTVAIIGIGCIDRPEAVFSVAIFRVSAIMIGIVSVAVVND HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC VTGSPSAWRALADRLRRAAVDVRRIARDAVAGRGIPDDGSCVALAGTIMALTSQVSFART CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ELADSALRMTGARSAMVAMLDMISCSRAIGGVLRENDVRPAILSRVRQRFGDGTPFTGAD HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCC DARGALDALLRVEDGDAPPTPAEAYLIERAMALLSYGRWVEDGIRTLEDGRAAPRVARNV CHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHH RLARHQDPVLAMLNGVRVIVGFSAAAAICILSGLPGSTMTLVQVATILTLSITTFDTRAF HHHHCCCHHHHHHCCHHEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCHHH GFGALIGVPLSTLCALVLDYRILPYGSDMGFLALMIAPVVFATCLLLIHPRHAAIGLNFG HHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEECHHH VFFFIVLGLDNIQNYDPMQFIDRNVFYTLSAVILFFSLVLLPPSARRRRFRVAMTVALSL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RRQFTGRGDIAGPMLISRQYDRLIQARTWTGHLPPHRVAAGVFGRIVSMGDLIGALARAR HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RHLTRAMMIPPVSDLARQGLDLLRVRNVPESARRIMHHATVLLAASRDLPPVEREIVIGA HHHHHHHCCCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHH VSGLFGAARLLERNVRLLRHYGIIPAAWRG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GQDAASGGAGMRAGIARRVWLPPILAGWFPPGSIAFCLRTWASAVLALTVAFWMQIDSP CCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ASAGVTVMILSQPLRGQILSKALYRIVGTLVGAAVAIGLIAAFGQDRFMVLGGAALWLGL CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHH CVVAGTLARDFRAYGALLAGYTVAIIGIGCIDRPEAVFSVAIFRVSAIMIGIVSVAVVND HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC VTGSPSAWRALADRLRRAAVDVRRIARDAVAGRGIPDDGSCVALAGTIMALTSQVSFART CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ELADSALRMTGARSAMVAMLDMISCSRAIGGVLRENDVRPAILSRVRQRFGDGTPFTGAD HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCC DARGALDALLRVEDGDAPPTPAEAYLIERAMALLSYGRWVEDGIRTLEDGRAAPRVARNV CHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHH RLARHQDPVLAMLNGVRVIVGFSAAAAICILSGLPGSTMTLVQVATILTLSITTFDTRAF HHHHCCCHHHHHHCCHHEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCHHH GFGALIGVPLSTLCALVLDYRILPYGSDMGFLALMIAPVVFATCLLLIHPRHAAIGLNFG HHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEECHHH VFFFIVLGLDNIQNYDPMQFIDRNVFYTLSAVILFFSLVLLPPSARRRRFRVAMTVALSL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RRQFTGRGDIAGPMLISRQYDRLIQARTWTGHLPPHRVAAGVFGRIVSMGDLIGALARAR HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RHLTRAMMIPPVSDLARQGLDLLRVRNVPESARRIMHHATVLLAASRDLPPVEREIVIGA HHHHHHHCCCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHH VSGLFGAARLLERNVRLLRHYGIIPAAWRG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9055427 [H]