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The map label for this gene is 162146542

Identifier: 162146542

GI number: 162146542

Start: 733446

End: 734879

Strand: Reverse

Name: 162146542

Synonym: GDI_0718

Alternate gene names: NA

Gene position: 734879-733446 (Counterclockwise)

Preceding gene: 162146543

Following gene: 162146541

Centisome position: 18.63

GC content: 63.11

Gene sequence:

>1434_bases
TTGCGTATCATGATGAGAACATTATTCCTGCAACCCCCTTCCTTCGACGGTTTCGATGGCGGCGCCGGGTCGCGCTACCA
GGCCAAGCGGGAAATCCGGTCGTTCTGGTACCCGACCTGGCTGGCGCAGCCCGCCGCCATGGTCGAAGGCAGCCGCCTGA
TCGACGCGCCGCCGGCCCGGATGGGGATGGAGCCGATCCTGGAGGACGTGCGCAACCGCGACCTGGTCATCATGCATACC
TCGACCCCGTCCTTCGCATCGGACGTGCGGGTCGCGCAGATGCTCAAGGACGCCAACCCGGCGCTGAAGATCGGCATGGT
CGGCGCCAAGGTCGCCGTCCAGGCCGAGGAAAGCCTGCTGAAGGCCGCGCCGGTGGATTTCGTCGCCCGCAACGAATTCG
ACTTCACGATCAAGGAAATCGCTGAAGGCCGCCCGTTTGCCGAGGTCGACGGCATTTCGTGGCGCAACGAGGACGGCACG
ATCGTCCACAACCGCGACCGCGCCATGATCGAGAACATGGACAGCCTGCCCTTCGTGACCGAGGTCTACAAGCGGGACCT
GAAGATCGAGGATTACTTCATCGGGTACCTGATGCACCCGTACATCTCGATCTATACCGGCCGTGGCTGCAAGTCGCATT
GCACGTTCTGCCTGTGGCCGCAGACCGTGGGTGGCCATCGCTACCGCACCCGCAGCCCGGAACACGTGGCTGCCGAAATC
CGGCTGGCGAAGCAGTATTTCCCGCAGGTCAAGGAATTCTTCTTCGACGACGACACCTTCACCGACGACCTGCCGCGCGC
GGAAGCGATCGCGAAGGAACTGGGCAAGATGGGCGTCACCTGGTCGTGCAACGCCAAGGCCAACGTGCCGCGCAAGACGC
TGGAAGTCCTGAAGGAAAACGGGCTGCGCCTGCTGCTGGTGGGGTATGAGAGCGGCAACCAGCAGATCCTGCACAACATC
AAGAAGGGCATGCGGGTCGAGGTCGCGCGCGAGTTCACGAAGAACTGCCACGAACTGGGAATCAAGATCCACGGCACCTT
CATCCTGGGCCTGCCCGGCGAGACCAAGGAGACGATCCAGGAGACGATCAGGTTCGCCACCGAGATCAATCCCCACACGC
TGCAGGTCTCGCTGGCCGCGCCCTATCCCGGCACGTTCCTGCACAAGCAGGCGACCGAAAACGGCTGGCTGGACGAAAGC
AACGCGGAACTGATCGACGAGAACGGCGTGCAGATGGCCCCCCTGCACTACCCGCATCTGTCGCACAGCGAAATCTTCAA
CGGCGTCGAGGAATTCTACCGGAAATTCTATTTCCGCGCGCCGAAGATCGCCTCGATCGTCGGCGAGATGGTGCGCAGCC
CGCAGATGATGAAGCGCCGCCTGCGCGAGGGCGTGGAATTCTTCCAGTTCCTGCGCGACCGCCGCGCGGCCTGA

Upstream 100 bases:

>100_bases
CTCCATCCCATCCTGTCGTGCCGGGCGACTGACGCACCCCACACGACATAAGACAGACCAAGAATGGCGGCGCCGGACCG
ATGTCCCCCCGCCCGAGGAT

Downstream 100 bases:

>100_bases
GCCCACCCGCCGGGGCCCAGGCCCCGGCGGACTTTCCCCCGGCGACACCTATCCATGAAGCGTGTGATCGTATCCGCCGA
CGATTTCGGTCTGTCGGAAG

Product: radical SAM family Fe-S protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MRIMMRTLFLQPPSFDGFDGGAGSRYQAKREIRSFWYPTWLAQPAAMVEGSRLIDAPPARMGMEPILEDVRNRDLVIMHT
STPSFASDVRVAQMLKDANPALKIGMVGAKVAVQAEESLLKAAPVDFVARNEFDFTIKEIAEGRPFAEVDGISWRNEDGT
IVHNRDRAMIENMDSLPFVTEVYKRDLKIEDYFIGYLMHPYISIYTGRGCKSHCTFCLWPQTVGGHRYRTRSPEHVAAEI
RLAKQYFPQVKEFFFDDDTFTDDLPRAEAIAKELGKMGVTWSCNAKANVPRKTLEVLKENGLRLLLVGYESGNQQILHNI
KKGMRVEVAREFTKNCHELGIKIHGTFILGLPGETKETIQETIRFATEINPHTLQVSLAAPYPGTFLHKQATENGWLDES
NAELIDENGVQMAPLHYPHLSHSEIFNGVEEFYRKFYFRAPKIASIVGEMVRSPQMMKRRLREGVEFFQFLRDRRAA

Sequences:

>Translated_477_residues
MRIMMRTLFLQPPSFDGFDGGAGSRYQAKREIRSFWYPTWLAQPAAMVEGSRLIDAPPARMGMEPILEDVRNRDLVIMHT
STPSFASDVRVAQMLKDANPALKIGMVGAKVAVQAEESLLKAAPVDFVARNEFDFTIKEIAEGRPFAEVDGISWRNEDGT
IVHNRDRAMIENMDSLPFVTEVYKRDLKIEDYFIGYLMHPYISIYTGRGCKSHCTFCLWPQTVGGHRYRTRSPEHVAAEI
RLAKQYFPQVKEFFFDDDTFTDDLPRAEAIAKELGKMGVTWSCNAKANVPRKTLEVLKENGLRLLLVGYESGNQQILHNI
KKGMRVEVAREFTKNCHELGIKIHGTFILGLPGETKETIQETIRFATEINPHTLQVSLAAPYPGTFLHKQATENGWLDES
NAELIDENGVQMAPLHYPHLSHSEIFNGVEEFYRKFYFRAPKIASIVGEMVRSPQMMKRRLREGVEFFQFLRDRRAA
>Mature_477_residues
MRIMMRTLFLQPPSFDGFDGGAGSRYQAKREIRSFWYPTWLAQPAAMVEGSRLIDAPPARMGMEPILEDVRNRDLVIMHT
STPSFASDVRVAQMLKDANPALKIGMVGAKVAVQAEESLLKAAPVDFVARNEFDFTIKEIAEGRPFAEVDGISWRNEDGT
IVHNRDRAMIENMDSLPFVTEVYKRDLKIEDYFIGYLMHPYISIYTGRGCKSHCTFCLWPQTVGGHRYRTRSPEHVAAEI
RLAKQYFPQVKEFFFDDDTFTDDLPRAEAIAKELGKMGVTWSCNAKANVPRKTLEVLKENGLRLLLVGYESGNQQILHNI
KKGMRVEVAREFTKNCHELGIKIHGTFILGLPGETKETIQETIRFATEINPHTLQVSLAAPYPGTFLHKQATENGWLDES
NAELIDENGVQMAPLHYPHLSHSEIFNGVEEFYRKFYFRAPKIASIVGEMVRSPQMMKRRLREGVEFFQFLRDRRAA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 54446; Mature: 54446

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIMMRTLFLQPPSFDGFDGGAGSRYQAKREIRSFWYPTWLAQPAAMVEGSRLIDAPPAR
CCEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCHHHHCCCCCCCCCCHH
MGMEPILEDVRNRDLVIMHTSTPSFASDVRVAQMLKDANPALKIGMVGAKVAVQAEESLL
CCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHH
KAAPVDFVARNEFDFTIKEIAEGRPFAEVDGISWRNEDGTIVHNRDRAMIENMDSLPFVT
HHCCCCCEECCCCCCHHHHHHCCCCCEEECCCCEECCCCCEEECCCHHHHHCCCCCHHHH
EVYKRDLKIEDYFIGYLMHPYISIYTGRGCKSHCTFCLWPQTVGGHRYRTRSPEHVAAEI
HHHHHCCCCHHHHHHHHHHHHHEEEECCCCHHCCCEEECCCCCCCCCCCCCCCHHHHHHH
RLAKQYFPQVKEFFFDDDTFTDDLPRAEAIAKELGKMGVTWSCNAKANVPRKTLEVLKEN
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHC
GLRLLLVGYESGNQQILHNIKKGMRVEVAREFTKNCHELGIKIHGTFILGLPGETKETIQ
CCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHH
ETIRFATEINPHTLQVSLAAPYPGTFLHKQATENGWLDESNAELIDENGVQMAPLHYPHL
HHHHHHHCCCCEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHCCCCCCEECCCCCCCC
SHSEIFNGVEEFYRKFYFRAPKIASIVGEMVRSPQMMKRRLREGVEFFQFLRDRRAA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIMMRTLFLQPPSFDGFDGGAGSRYQAKREIRSFWYPTWLAQPAAMVEGSRLIDAPPAR
CCEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCHHHHCCCCCCCCCCHH
MGMEPILEDVRNRDLVIMHTSTPSFASDVRVAQMLKDANPALKIGMVGAKVAVQAEESLL
CCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHH
KAAPVDFVARNEFDFTIKEIAEGRPFAEVDGISWRNEDGTIVHNRDRAMIENMDSLPFVT
HHCCCCCEECCCCCCHHHHHHCCCCCEEECCCCEECCCCCEEECCCHHHHHCCCCCHHHH
EVYKRDLKIEDYFIGYLMHPYISIYTGRGCKSHCTFCLWPQTVGGHRYRTRSPEHVAAEI
HHHHHCCCCHHHHHHHHHHHHHEEEECCCCHHCCCEEECCCCCCCCCCCCCCCHHHHHHH
RLAKQYFPQVKEFFFDDDTFTDDLPRAEAIAKELGKMGVTWSCNAKANVPRKTLEVLKEN
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHC
GLRLLLVGYESGNQQILHNIKKGMRVEVAREFTKNCHELGIKIHGTFILGLPGETKETIQ
CCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHH
ETIRFATEINPHTLQVSLAAPYPGTFLHKQATENGWLDESNAELIDENGVQMAPLHYPHL
HHHHHHHCCCCEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHCCCCCCEECCCCCCCC
SHSEIFNGVEEFYRKFYFRAPKIASIVGEMVRSPQMMKRRLREGVEFFQFLRDRRAA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]