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The map label for this gene is asnC [H]

Identifier: 162146440

GI number: 162146440

Start: 625423

End: 625884

Strand: Direct

Name: asnC [H]

Synonym: GDI_0615

Alternate gene names: 162146440

Gene position: 625423-625884 (Clockwise)

Preceding gene: 162146438

Following gene: 162146441

Centisome position: 15.86

GC content: 63.85

Gene sequence:

>462_bases
ATGGTGGAAAATCTGGATCATTTTGATCGTGCCCTGCTGCGGGCCCTGCAACAGGATGCCGCGCTGTCGCAACGCGAACT
GGCCGATATCGTGGGCCTGTCGCAGAACGCATGCTGGCGCCGGCTGCATGCCCTGCGCGAACGCGGACTGATCCAGCGCC
AGACGGTGCGGCTGGACCCGGTGGCGCTGGGGCTGGGGCTGACCGTCTTCGTCATGGTGCGCACGCGCCATCATTCGCGG
GACTGGCTGGACCGGTTCCGCGACGCGGTGACGGCCGTGCCGAACGTGATCGATTTCTACCGGATCGCGGGCGATTACGA
TTACATGCTCAAGATCGTCACGACGGACATGAACGCCTTCGACGAGATCTATCGCGGCCTGATCGCCCGGGTCGAACTGG
ACACGGTCACATCCTACATGGCCATGGAGGCGATCTGCGACCGCCGGGACCTGCCCTTGTAA

Upstream 100 bases:

>100_bases
TCGCCTCAAGAGGGTTCGCGATGAAAATAGACGGCGCGGCGGGAAAGAACTTCCCCTTTTCCTGCATTGAAATGGGCCGA
ATCGGGTCATATGATCGGCT

Downstream 100 bases:

>100_bases
GCGGGCCTGGACAGGGACGCGGGCGGGGTGCGTGATGGGTCGAACCTCACCGCGCACCCCTTCCTGTTCTAGAACCGTGC
GTGCAGCGTACCGAAGAACT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MVENLDHFDRALLRALQQDAALSQRELADIVGLSQNACWRRLHALRERGLIQRQTVRLDPVALGLGLTVFVMVRTRHHSR
DWLDRFRDAVTAVPNVIDFYRIAGDYDYMLKIVTTDMNAFDEIYRGLIARVELDTVTSYMAMEAICDRRDLPL

Sequences:

>Translated_153_residues
MVENLDHFDRALLRALQQDAALSQRELADIVGLSQNACWRRLHALRERGLIQRQTVRLDPVALGLGLTVFVMVRTRHHSR
DWLDRFRDAVTAVPNVIDFYRIAGDYDYMLKIVTTDMNAFDEIYRGLIARVELDTVTSYMAMEAICDRRDLPL
>Mature_153_residues
MVENLDHFDRALLRALQQDAALSQRELADIVGLSQNACWRRLHALRERGLIQRQTVRLDPVALGLGLTVFVMVRTRHHSR
DWLDRFRDAVTAVPNVIDFYRIAGDYDYMLKIVTTDMNAFDEIYRGLIARVELDTVTSYMAMEAICDRRDLPL

Specific function: Represses the secondary, H(+)-coupled glutamate uptake system (Gluemp) genes [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=44.6666666666667, Blast_Score=138, Evalue=2e-34,
Organism=Escherichia coli, GI1787116, Length=144, Percent_Identity=31.9444444444444, Blast_Score=83, Evalue=8e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 17736; Mature: 17736

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVENLDHFDRALLRALQQDAALSQRELADIVGLSQNACWRRLHALRERGLIQRQTVRLDP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCH
VALGLGLTVFVMVRTRHHSRDWLDRFRDAVTAVPNVIDFYRIAGDYDYMLKIVTTDMNAF
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHH
DEIYRGLIARVELDTVTSYMAMEAICDRRDLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVENLDHFDRALLRALQQDAALSQRELADIVGLSQNACWRRLHALRERGLIQRQTVRLDP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCH
VALGLGLTVFVMVRTRHHSRDWLDRFRDAVTAVPNVIDFYRIAGDYDYMLKIVTTDMNAF
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHH
DEIYRGLIARVELDTVTSYMAMEAICDRRDLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7665494 [H]