| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162146382
Identifier: 162146382
GI number: 162146382
Start: 562569
End: 564248
Strand: Direct
Name: 162146382
Synonym: GDI_0557
Alternate gene names: NA
Gene position: 562569-564248 (Clockwise)
Preceding gene: 162146381
Following gene: 162146383
Centisome position: 14.26
GC content: 67.68
Gene sequence:
>1680_bases ATGAGCGCTTACTCCAGGATTCGGTTTCTCCTCATGTTCGGCACGGCCCTGTCGGCGGGCGTGCCGTCATGGGCCATGGC CGCGTCGCAGGACGACGAGGTCGCGGCCATGCGCCGCGAGATGCGGCAGATGCTGGGGGAAATCCGCCAGTTGCAGGCGC GCGTGGCGCGGGACGAAAGCGGGGCGAAGGCCGCCAGGCATGGCGCCCCGGCAGGGCGCGTCCGGGTGGCGCGCGCCGCC CCCCCGCCCTGGACCGGGCCGGAGCCCGTGATCGGCACGCCCCCGGCCGTGCCGGACCGCACCCTGCTGACGTTCGGATC CTCCAGCGGGCCGCGGTCCGACGCCGGCAGCCGCCTGATCACGCCGGAAGGTCCTCCGTCCTCGTGGTCGGATTTCAGGG CGGCGACGGCCAGGGACGAAACCATGCATATCGGCGGCATGGCCATCGGCTTTCCGGAGGGGCGGCCGACCATCGCGTCG GATGACGGGGCCTATGCCTTCTCGCTGGGCCTGACGGCGCAGGAGGATATCGGCGGCTTCGTCGGCACGGCCCCCAAGCG GGGCGAGGGCAAGGGCAATTTCAACCCGCTGACCGAGAATGCACGCCGCATCCGCCTGTATTTCTCCTGGCGCTACAAGG ACTGGGTCGCCAACGTCACCCCCGAATTCGGCAATGCGACGGCCGACGGATCGGTCAGCCTGTTCGAAGCGAACCTGAAC TATACCGGGCTGCGCCATACGATCCTGACCGTCGGCTATTTCCAGCCGCGCATGGAAGAGGAAAGCGCGGAACGCGCCTC GTCGTTCGAATTCATGGAACGTCCCACGATCGTGGACCTGGTCCGCAATCTGGCGGGCGGTGTCGCCCGCTTCAGCGTCG GGGGCGAGCACGCCGAAAAGCGCTGGCTGGCGGCGGCCTATTTCACCGGACAGAAATACGGCGACCGTTCCAAGGACACC ACGATCACCGACAGCCAGACCGGCGCGGTGGCGCGCATCGCCGGCCGTCCCTATGTCAGCAAGGATATCGACGTCCATGT CGGTGCCGGCGCGACCAGCGCCTTCAAGGTCAACCAGAGCTCGACCGGCCGCAACTATACCTTCAGCGACAATGTGGAAA TGCCGCTGGGCGAGACATCGCTGCTGACATCGGGCGCGCTGACCAACGTCGCCCAGATCTGGGCCGCGGGCCCGCAGGTC GGGTTCCGGTGGCGGAACTTCCTGCTGAAGAGCGAATATTACCATATTGGCGTCGAGCGCGGCGCGCCGCCCGCGGCGCG GCGCCCCTGCCGTCGCTGGGCTTCGACGGTGGTACGTCGCGGCAACTACACGCTGTTCGGCAAGGGGCGCGCCTATAACG CCAAGACCGCCGCCTTCACCACGCCCGGGGTGATCTACGATTTCGATCCGCTGCACGACCAGTGGGGCGCGATGGAAGTC AGCGGCCGCTGGAGCGTGACGGACCTGGGCGATGTCCCCGACCAGGGCGGCAAGGGCATCAACGGCAACCAGCAGACGGT CTGGGAAGGGGGGGTGAACTGGTACCCGACCCGGCACGTGAAACTTATGCTGGACTATGATCATTTCATCGTCAGCCGGT CGAAAGGCGTCTCCGGCGGCGTCAACCTCCTGGGCCGCAGCGGCAATGCCGTGATGGGCCGGGTCCAGGCCTCGTTCTGA
Upstream 100 bases:
>100_bases TTAAAGCAAACACTCACGACCAATGGTTATTTCTCCATAAAACAACCATGCGGATTGGTTATTTTTCGGCAAGCGCCGGG GGTCGGAGACGTCGGGAATT
Downstream 100 bases:
>100_bases TCCTTCCGGTTCCCCGGATACGGCTTTCAAGGACAGTCATGACGAACGTTTTCCCCTCTTCCTCGCGCCGGGCGTTTCTT GCCGGCGCGGCCGCCGGTGC
Product: porin protein
Products: NA
Alternate protein names: Polyphosphate-Selective Porin O; Porin O/P Polyphosphate-Selective; Phosphate-Selective Porin O And P Family Protein; Porin O And P Phosphate-Selective; Porin O
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MSAYSRIRFLLMFGTALSAGVPSWAMAASQDDEVAAMRREMRQMLGEIRQLQARVARDESGAKAARHGAPAGRVRVARAA PPPWTGPEPVIGTPPAVPDRTLLTFGSSSGPRSDAGSRLITPEGPPSSWSDFRAATARDETMHIGGMAIGFPEGRPTIAS DDGAYAFSLGLTAQEDIGGFVGTAPKRGEGKGNFNPLTENARRIRLYFSWRYKDWVANVTPEFGNATADGSVSLFEANLN YTGLRHTILTVGYFQPRMEEESAERASSFEFMERPTIVDLVRNLAGGVARFSVGGEHAEKRWLAAAYFTGQKYGDRSKDT TITDSQTGAVARIAGRPYVSKDIDVHVGAGATSAFKVNQSSTGRNYTFSDNVEMPLGETSLLTSGALTNVAQIWAAGPQV GFRWRNFLLKSEYYHIGVERGAPPAARRPCRRWASTVVRRGNYTLFGKGRAYNAKTAAFTTPGVIYDFDPLHDQWGAMEV SGRWSVTDLGDVPDQGGKGINGNQQTVWEGGVNWYPTRHVKLMLDYDHFIVSRSKGVSGGVNLLGRSGNAVMGRVQASF
Sequences:
>Translated_559_residues MSAYSRIRFLLMFGTALSAGVPSWAMAASQDDEVAAMRREMRQMLGEIRQLQARVARDESGAKAARHGAPAGRVRVARAA PPPWTGPEPVIGTPPAVPDRTLLTFGSSSGPRSDAGSRLITPEGPPSSWSDFRAATARDETMHIGGMAIGFPEGRPTIAS DDGAYAFSLGLTAQEDIGGFVGTAPKRGEGKGNFNPLTENARRIRLYFSWRYKDWVANVTPEFGNATADGSVSLFEANLN YTGLRHTILTVGYFQPRMEEESAERASSFEFMERPTIVDLVRNLAGGVARFSVGGEHAEKRWLAAAYFTGQKYGDRSKDT TITDSQTGAVARIAGRPYVSKDIDVHVGAGATSAFKVNQSSTGRNYTFSDNVEMPLGETSLLTSGALTNVAQIWAAGPQV GFRWRNFLLKSEYYHIGVERGAPPAARRPCRRWASTVVRRGNYTLFGKGRAYNAKTAAFTTPGVIYDFDPLHDQWGAMEV SGRWSVTDLGDVPDQGGKGINGNQQTVWEGGVNWYPTRHVKLMLDYDHFIVSRSKGVSGGVNLLGRSGNAVMGRVQASF >Mature_558_residues SAYSRIRFLLMFGTALSAGVPSWAMAASQDDEVAAMRREMRQMLGEIRQLQARVARDESGAKAARHGAPAGRVRVARAAP PPWTGPEPVIGTPPAVPDRTLLTFGSSSGPRSDAGSRLITPEGPPSSWSDFRAATARDETMHIGGMAIGFPEGRPTIASD DGAYAFSLGLTAQEDIGGFVGTAPKRGEGKGNFNPLTENARRIRLYFSWRYKDWVANVTPEFGNATADGSVSLFEANLNY TGLRHTILTVGYFQPRMEEESAERASSFEFMERPTIVDLVRNLAGGVARFSVGGEHAEKRWLAAAYFTGQKYGDRSKDTT ITDSQTGAVARIAGRPYVSKDIDVHVGAGATSAFKVNQSSTGRNYTFSDNVEMPLGETSLLTSGALTNVAQIWAAGPQVG FRWRNFLLKSEYYHIGVERGAPPAARRPCRRWASTVVRRGNYTLFGKGRAYNAKTAAFTTPGVIYDFDPLHDQWGAMEVS GRWSVTDLGDVPDQGGKGINGNQQTVWEGGVNWYPTRHVKLMLDYDHFIVSRSKGVSGGVNLLGRSGNAVMGRVQASF
Specific function: Unknown
COG id: COG3746
COG function: function code P; Phosphate-selective porin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60657; Mature: 60525
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYSRIRFLLMFGTALSAGVPSWAMAASQDDEVAAMRREMRQMLGEIRQLQARVARDES CCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GAKAARHGAPAGRVRVARAAPPPWTGPEPVIGTPPAVPDRTLLTFGSSSGPRSDAGSRLI CCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEE TPEGPPSSWSDFRAATARDETMHIGGMAIGFPEGRPTIASDDGAYAFSLGLTAQEDIGGF CCCCCCCCHHHHHHHCCCCCEEEECEEEEECCCCCCCEECCCCCEEEEECCCCHHHCCCH VGTAPKRGEGKGNFNPLTENARRIRLYFSWRYKDWVANVTPEFGNATADGSVSLFEANLN HCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECHHCCCCCCCCCCCCCCCEEEEEECCC YTGLRHTILTVGYFQPRMEEESAERASSFEFMERPTIVDLVRNLAGGVARFSVGGEHAEK CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCHHHH RWLAAAYFTGQKYGDRSKDTTITDSQTGAVARIAGRPYVSKDIDVHVGAGATSAFKVNQS HEEEEEEECCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCEEEECCCCCEEEEECCC STGRNYTFSDNVEMPLGETSLLTSGALTNVAQIWAAGPQVGFRWRNFLLKSEYYHIGVER CCCCCEEECCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECC GAPPAARRPCRRWASTVVRRGNYTLFGKGRAYNAKTAAFTTPGVIYDFDPLHDQWGAMEV CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCEEEECCCCCCCCCCEEE SGRWSVTDLGDVPDQGGKGINGNQQTVWEGGVNWYPTRHVKLMLDYDHFIVSRSKGVSGG CCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCEEEEECCCCCCCC VNLLGRSGNAVMGRVQASF CEEEECCCCEEEEEEEECC >Mature Secondary Structure SAYSRIRFLLMFGTALSAGVPSWAMAASQDDEVAAMRREMRQMLGEIRQLQARVARDES CHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GAKAARHGAPAGRVRVARAAPPPWTGPEPVIGTPPAVPDRTLLTFGSSSGPRSDAGSRLI CCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEE TPEGPPSSWSDFRAATARDETMHIGGMAIGFPEGRPTIASDDGAYAFSLGLTAQEDIGGF CCCCCCCCHHHHHHHCCCCCEEEECEEEEECCCCCCCEECCCCCEEEEECCCCHHHCCCH VGTAPKRGEGKGNFNPLTENARRIRLYFSWRYKDWVANVTPEFGNATADGSVSLFEANLN HCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECHHCCCCCCCCCCCCCCCEEEEEECCC YTGLRHTILTVGYFQPRMEEESAERASSFEFMERPTIVDLVRNLAGGVARFSVGGEHAEK CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCHHHH RWLAAAYFTGQKYGDRSKDTTITDSQTGAVARIAGRPYVSKDIDVHVGAGATSAFKVNQS HEEEEEEECCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCEEEECCCCCEEEEECCC STGRNYTFSDNVEMPLGETSLLTSGALTNVAQIWAAGPQVGFRWRNFLLKSEYYHIGVER CCCCCEEECCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECC GAPPAARRPCRRWASTVVRRGNYTLFGKGRAYNAKTAAFTTPGVIYDFDPLHDQWGAMEV CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCEEEECCCCCCCCCCEEE SGRWSVTDLGDVPDQGGKGINGNQQTVWEGGVNWYPTRHVKLMLDYDHFIVSRSKGVSGG CCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCEEEEECCCCCCCC VNLLGRSGNAVMGRVQASF CEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA