Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 162146381

GI number: 162146381

Start: 561651

End: 562316

Strand: Direct

Name: uidR [C]

Synonym: GDI_0556

Alternate gene names: 162146381

Gene position: 561651-562316 (Clockwise)

Preceding gene: 162146379

Following gene: 162146382

Centisome position: 14.24

GC content: 66.22

Gene sequence:

>666_bases
ATGCCTCCGTTTAAATACGGAGGGTCCCTCCGTTTATCAAGGGGCGCTCAGAGGGGAATATGCGACGTGCCGGATTCCAT
AGCAGCGAAGCCGCGCAAGCCCCGTGCGGATGCGCAACGCAATCGCGACCGGCTGCTTCAGGTGGCGAAGGCGGCGTTTG
CCGAAATCGGGCCCGCCGTCAGTCTCGATGAAATTGCGCGCCGGGCCGGCGTCGGGATCGGTACCCTCTACCGTCATTTT
CCCACCCGCGACGCCCTGGTCGAGGGGGTCTATCGCAACGAAACCCGGCGTCTGGTCGAAGCGGCGGCGAATCTGGACAA
AACCCACGCGCCGGTCGATGCGTTGCGGGCCTGGATGCTGATGTTCGTCGATTACATCGCCACCAAGCAGGTGATGGCTT
CGGCGCTCAATGCGCTGATCGCCGGCCCGTCGGACCTGTATGCCGCGTCGGGCCCGCAGATGATCGCGACCATGACGCGG
CTGGCGGACCGGGCCGTCGCCAGTGGGGAAATCCGCCTGGATTTCGACCCCGTCGACCTGCTGCGCGCGCTGGCCGGCGT
GGCCAATGTCGCGCCCACGGCCAATTGGCAGGACAGCGCCCGGATTCTGGTCGATGTCCTGATCGCCGGGTTGCGCGCGC
CACGGGCGGCGGACGAAGGTCTGTAG

Upstream 100 bases:

>100_bases
TGGTCGACGTGGCATTGAAGGATTCAGCCATGATTCTGTCCTTTGTGAAACGCCCGGCCTGCATTGCCGAGGGAAAGGCG
GTGCGGCATATAAAAGGAGA

Downstream 100 bases:

>100_bases
GACGGGGCGTCGGTCGGATCGTCGATCCGGCCCGATTCTACTTAACGGAATAGTAAATTACATGTTGCAATTGTGCAACT
TGTTGGTGGAATATGTCATC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulatory Protein; Transcription Regulator Protein; TetR-Type Regulator; TetR Family Protein Transcriptional Regulator; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcription Regulator Protein Tetr Family; Regulatory Protein; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MPPFKYGGSLRLSRGAQRGICDVPDSIAAKPRKPRADAQRNRDRLLQVAKAAFAEIGPAVSLDEIARRAGVGIGTLYRHF
PTRDALVEGVYRNETRRLVEAAANLDKTHAPVDALRAWMLMFVDYIATKQVMASALNALIAGPSDLYAASGPQMIATMTR
LADRAVASGEIRLDFDPVDLLRALAGVANVAPTANWQDSARILVDVLIAGLRAPRAADEGL

Sequences:

>Translated_221_residues
MPPFKYGGSLRLSRGAQRGICDVPDSIAAKPRKPRADAQRNRDRLLQVAKAAFAEIGPAVSLDEIARRAGVGIGTLYRHF
PTRDALVEGVYRNETRRLVEAAANLDKTHAPVDALRAWMLMFVDYIATKQVMASALNALIAGPSDLYAASGPQMIATMTR
LADRAVASGEIRLDFDPVDLLRALAGVANVAPTANWQDSARILVDVLIAGLRAPRAADEGL
>Mature_220_residues
PPFKYGGSLRLSRGAQRGICDVPDSIAAKPRKPRADAQRNRDRLLQVAKAAFAEIGPAVSLDEIARRAGVGIGTLYRHFP
TRDALVEGVYRNETRRLVEAAANLDKTHAPVDALRAWMLMFVDYIATKQVMASALNALIAGPSDLYAASGPQMIATMTRL
ADRAVASGEIRLDFDPVDLLRALAGVANVAPTANWQDSARILVDVLIAGLRAPRAADEGL

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23770; Mature: 23638

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPFKYGGSLRLSRGAQRGICDVPDSIAAKPRKPRADAQRNRDRLLQVAKAAFAEIGPAV
CCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
SLDEIARRAGVGIGTLYRHFPTRDALVEGVYRNETRRLVEAAANLDKTHAPVDALRAWML
CHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
MFVDYIATKQVMASALNALIAGPSDLYAASGPQMIATMTRLADRAVASGEIRLDFDPVDL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCHHHH
LRALAGVANVAPTANWQDSARILVDVLIAGLRAPRAADEGL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PPFKYGGSLRLSRGAQRGICDVPDSIAAKPRKPRADAQRNRDRLLQVAKAAFAEIGPAV
CCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
SLDEIARRAGVGIGTLYRHFPTRDALVEGVYRNETRRLVEAAANLDKTHAPVDALRAWML
CHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
MFVDYIATKQVMASALNALIAGPSDLYAASGPQMIATMTRLADRAVASGEIRLDFDPVDL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCHHHH
LRALAGVANVAPTANWQDSARILVDVLIAGLRAPRAADEGL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA