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The map label for this gene is ymdB [H]

Identifier: 162146342

GI number: 162146342

Start: 510992

End: 511807

Strand: Direct

Name: ymdB [H]

Synonym: GDI_0517

Alternate gene names: 162146342

Gene position: 510992-511807 (Clockwise)

Preceding gene: 162146341

Following gene: 162146346

Centisome position: 12.96

GC content: 70.1

Gene sequence:

>816_bases
GTGCGGATCTTGTTTCTGGGTGATATCGTCGGGCGCACGGGGCGCGACGCCGTCATCGCCGCGCTGCCGGGCCTGCGGCG
GGATTTGCGGCTGGACCTCGTGGTGGTGAATGGCGAGAACGCCAGCCATGGCTTCGGCCTGTCGCTGTCCATCGCCCAGA
ACCTGTTCGCCGCCGGGACCGATGTCATCACCCTGGGCAACCATGCCTGGGACCGCAAGGACCTGGTGGGCCAGATCGGC
ACCGAGCCCCGCATCATCCGCCCCGCCAACTATCCCCCCGGCACGCCCGGACAGGGCAGCGTCGTGGTCGGGCTGGTCGA
TGGGCGCAAGGCGCTGGTGGTCAATGTCATGGGCCGCCAGTTCATGGACGCGCTGGACGACCCGTTCCGCGCCGTGACCG
ATATTCTGGGCCGGCACCGGCTGGGCGTGACGGTGCATGCGGTGGTGGTGGATATCCACGCCGAGGCGTCGAGCGAGAAA
TGGGCGATGGGCCATGTGCTGGACGGCCGCGCCTCGCTGGTGGTGGGCACCCACACCCACACGCCCACGGCCGATCACCG
CATCCTGCCGGGCGGCACGGCCTACCAGACCGACGCCGGCATGTGCGGGGACTATGACAGCGTGATCGGCATGGGCAAGG
ACGCGGCCATCGCCCGCTTCCTGCGCCGCATGCCCGGCGAGCGCCTGCAACCCGCCGAGGGCGAGGCAAGCCTGGCCGGA
ATGATGGTGGAAACCGACGACGCGACCGGCCTGGCCCGACGCATGGCGCCGCTGCGCATGGGCGGGCACCTGGCCCCGAC
GATGCCGGATTTCTAG

Upstream 100 bases:

>100_bases
GGGCGTCATGACGTCCCCCTGCCGGTCATCGTGACCGAACGCGAAACCATCCGCTGCGGCGCCTGACGTCCGGGGCGGAC
GACGGGAAAAGGAAGGCCGG

Downstream 100 bases:

>100_bases
GCGATCGCCTCACTCCCCTTCCGGCGGCAGCGGCCGGGGCCGGCGTTCGTCGTCGATCGCGACGAAGGTGAAGACGCCTT
CGGTCACCTTGATGCTCTCG

Product: phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRILFLGDIVGRTGRDAVIAALPGLRRDLRLDLVVVNGENASHGFGLSLSIAQNLFAAGTDVITLGNHAWDRKDLVGQIG
TEPRIIRPANYPPGTPGQGSVVVGLVDGRKALVVNVMGRQFMDALDDPFRAVTDILGRHRLGVTVHAVVVDIHAEASSEK
WAMGHVLDGRASLVVGTHTHTPTADHRILPGGTAYQTDAGMCGDYDSVIGMGKDAAIARFLRRMPGERLQPAEGEASLAG
MMVETDDATGLARRMAPLRMGGHLAPTMPDF

Sequences:

>Translated_271_residues
MRILFLGDIVGRTGRDAVIAALPGLRRDLRLDLVVVNGENASHGFGLSLSIAQNLFAAGTDVITLGNHAWDRKDLVGQIG
TEPRIIRPANYPPGTPGQGSVVVGLVDGRKALVVNVMGRQFMDALDDPFRAVTDILGRHRLGVTVHAVVVDIHAEASSEK
WAMGHVLDGRASLVVGTHTHTPTADHRILPGGTAYQTDAGMCGDYDSVIGMGKDAAIARFLRRMPGERLQPAEGEASLAG
MMVETDDATGLARRMAPLRMGGHLAPTMPDF
>Mature_271_residues
MRILFLGDIVGRTGRDAVIAALPGLRRDLRLDLVVVNGENASHGFGLSLSIAQNLFAAGTDVITLGNHAWDRKDLVGQIG
TEPRIIRPANYPPGTPGQGSVVVGLVDGRKALVVNVMGRQFMDALDDPFRAVTDILGRHRLGVTVHAVVVDIHAEASSEK
WAMGHVLDGRASLVVGTHTHTPTADHRILPGGTAYQTDAGMCGDYDSVIGMGKDAAIARFLRRMPGERLQPAEGEASLAG
MMVETDDATGLARRMAPLRMGGHLAPTMPDF

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28808; Mature: 28808

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFLGDIVGRTGRDAVIAALPGLRRDLRLDLVVVNGENASHGFGLSLSIAQNLFAAGT
CEEEEEEHHHCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEHHHHHHHHHCCC
DVITLGNHAWDRKDLVGQIGTEPRIIRPANYPPGTPGQGSVVVGLVDGRKALVVNVMGRQ
CEEEECCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHH
FMDALDDPFRAVTDILGRHRLGVTVHAVVVDIHAEASSEKWAMGHVLDGRASLVVGTHTH
HHHHHCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEECEEECCCEEEEEECCCC
TPTADHRILPGGTAYQTDAGMCGDYDSVIGMGKDAAIARFLRRMPGERLQPAEGEASLAG
CCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEE
MMVETDDATGLARRMAPLRMGGHLAPTMPDF
EEEECCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRILFLGDIVGRTGRDAVIAALPGLRRDLRLDLVVVNGENASHGFGLSLSIAQNLFAAGT
CEEEEEEHHHCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEHHHHHHHHHCCC
DVITLGNHAWDRKDLVGQIGTEPRIIRPANYPPGTPGQGSVVVGLVDGRKALVVNVMGRQ
CEEEECCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHH
FMDALDDPFRAVTDILGRHRLGVTVHAVVVDIHAEASSEKWAMGHVLDGRASLVVGTHTH
HHHHHCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEECEEECCCEEEEEECCCC
TPTADHRILPGGTAYQTDAGMCGDYDSVIGMGKDAAIARFLRRMPGERLQPAEGEASLAG
CCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEE
MMVETDDATGLARRMAPLRMGGHLAPTMPDF
EEEECCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]