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The map label for this gene is lsdN

Identifier: 162146313

GI number: 162146313

Start: 485071

End: 485565

Strand: Direct

Name: lsdN

Synonym: GDI_0488

Alternate gene names: NA

Gene position: 485071-485565 (Clockwise)

Preceding gene: 162146312

Following gene: 162146314

Centisome position: 12.3

GC content: 72.93

Gene sequence:

>495_bases
ATGACCCGGCCGGTCGGCCGGGACCGGGTCCTGGCATGGTCCGCCGGATTCATGCTGTGCGTGGGGCCGTTTTTCATCCC
CCATGCCGGCGCGGCACCCCCGCCGGACGCGGCACGAATCGACGCGTGGCAGCAGGTCATCCTGGCCCGCCCGCTGTTCA
GCCATTCCCGCCGTCCCGACGCCACGCCGGACCAGTCCGCGCCCCGGCCCCGGCTGGCCGGCATCGTCGTCAGCGGCGGG
CGCAGGCGCGCCATCTTCATGACGCGGGAAGACGGTCCCGGCCAGGTCGTCGATGCCGGCACGACCGTCGGCCCGTGGCA
GGTCGTCGCGATCGGCGCAGGCACCGTGCGCGTCCGGGGCGCGGACGGCGAGCAGACCCTGCGGCCGGACCGCGACCGCA
GCGCCGATACACCGGCACCGGGCGACGCATCCTCCATCGACAACAGTTCCGGCCTTCCCCGGACAGAAGAACGGATTCCA
GGCAACACGCAATGA

Upstream 100 bases:

>100_bases
AGGACGCGGCGGCCAACATGATGGAATGCGACATGTCCGTGTACGCGTTCCGCCGGAACGAAAACAGGCCGACTCCTCCT
CCATCCCCGGAAACACAACC

Downstream 100 bases:

>100_bases
ACAGTGACACGACTTCCCGTCGCGGCATGACCTCCCGCCGTGCGCAGACCGCCTGGACCGGCATCGCCTTGTGTTTTTCG
ATCGCGGGATGCAGCCCCGA

Product: general secretion pathway protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTRPVGRDRVLAWSAGFMLCVGPFFIPHAGAAPPPDAARIDAWQQVILARPLFSHSRRPDATPDQSAPRPRLAGIVVSGG
RRRAIFMTREDGPGQVVDAGTTVGPWQVVAIGAGTVRVRGADGEQTLRPDRDRSADTPAPGDASSIDNSSGLPRTEERIP
GNTQ

Sequences:

>Translated_164_residues
MTRPVGRDRVLAWSAGFMLCVGPFFIPHAGAAPPPDAARIDAWQQVILARPLFSHSRRPDATPDQSAPRPRLAGIVVSGG
RRRAIFMTREDGPGQVVDAGTTVGPWQVVAIGAGTVRVRGADGEQTLRPDRDRSADTPAPGDASSIDNSSGLPRTEERIP
GNTQ
>Mature_163_residues
TRPVGRDRVLAWSAGFMLCVGPFFIPHAGAAPPPDAARIDAWQQVILARPLFSHSRRPDATPDQSAPRPRLAGIVVSGGR
RRAIFMTREDGPGQVVDAGTTVGPWQVVAIGAGTVRVRGADGEQTLRPDRDRSADTPAPGDASSIDNSSGLPRTEERIPG
NTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17410; Mature: 17279

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPVGRDRVLAWSAGFMLCVGPFFIPHAGAAPPPDAARIDAWQQVILARPLFSHSRRPD
CCCCCCCCEEEEECCCCEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
ATPDQSAPRPRLAGIVVSGGRRRAIFMTREDGPGQVVDAGTTVGPWQVVAIGAGTVRVRG
CCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCEEEECCCCCCCEEEEEECCCEEEEEC
ADGEQTLRPDRDRSADTPAPGDASSIDNSSGLPRTEERIPGNTQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
TRPVGRDRVLAWSAGFMLCVGPFFIPHAGAAPPPDAARIDAWQQVILARPLFSHSRRPD
CCCCCCCEEEEECCCCEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
ATPDQSAPRPRLAGIVVSGGRRRAIFMTREDGPGQVVDAGTTVGPWQVVAIGAGTVRVRG
CCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCEEEECCCCCCCEEEEEECCCEEEEEC
ADGEQTLRPDRDRSADTPAPGDASSIDNSSGLPRTEERIPGNTQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA