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The map label for this gene is fixB [H]

Identifier: 162146277

GI number: 162146277

Start: 447871

End: 448965

Strand: Direct

Name: fixB [H]

Synonym: GDI_0452

Alternate gene names: 162146277

Gene position: 447871-448965 (Clockwise)

Preceding gene: 162146276

Following gene: 162146278

Centisome position: 11.36

GC content: 67.4

Gene sequence:

>1095_bases
ATGAACGCCAAACCGACGGGCGGGGCACCGGGCGGCCGCGCCAATATGAAGAAGGAATTGTCGGAGCGCTTCCAGCGCTA
CCGCCATGTCTGGGTCTTCGTCGAATTCGAGCACGGAAAGATCCATCCCGTCTCGCTGGAACTGCTGGGCGAGGGACGCA
AGCTGGCCGACCAGTTGCAGGTCGAACTGGCCGGAATCGTGCTGGGCAGCGGCCGGGCCGAACTGGACGAGGCGGCAAGG
GCGGCGTTTTCGTATGGCGCCGACGTCGTCTACCTGGCCGACGATCCGGTCCTGGCCAACTACCGCAACGAACCCTACAC
CCAGGTCATGACCGCGCTGGTCAATGCCTATGAACCGGAAATCGTCCCTTCTGGGCGCCACGGTCCTGGGCCGCGACCTG
GCCGGCGCCGTCGCGACGACGCTAAGACCGGCCTGACGGCGGACTGCACCGAACTCGCGATCGACGGCGAACGGTCGCTG
GCGGCCACGCGCCCGACATTCGGCGGGTCGCTGCTGTGCACGATCCACACGCTGAACTATCGCCCGCAGATGGCCACCGT
CCGTCCGCGCGTCATGGCGATGCCCGAGGCCCAGCCGGGCCGCACGGGCCGCATCGTGGAATTCAAGGTCGACGTGGCCG
AGGACAGCATCATCACCAAGGTGCTGGATTTCCTGCCCGATACGGCCAACGAGGCCGAGCAGATGGCCTTCGCCGACATC
GTCGTCGCGGGCGGCATGGGCCTGCGCAGTGCCGAGAACCTGGGGCTGGTGCGCGATCTCGCGGCCGTGCTGGGCGGGGA
CTGGGGCGGGTCGCGCCCGCTGGTGCAGAAGGGGTGGATTCCCTCGGACCGGCAGATCGGGCAGACCGGCAAGACGATCC
GCCCGCGCCTGTATATCGCGGCGGGCATTTCCGGCGCGATCCAGCATCGCGTGGGGGTCGAGGGCGCGGACCTGATCGTC
GCGATCAATACCGATCCCAACGCACCGATCTTCGATTTTGCCCATGTCGGGATCGTGGCCGATGCGATCACCCTTCTGCC
GGCGCTGACCGAGGCTTTCGGACGGCGCCTGTCGGTCAACCGGATGGCGAGCTGA

Upstream 100 bases:

>100_bases
GCGCTGGCCGAAACGCTGATCGACGCCATCTTCACCCGCCAGCCCGTGCTGCAGGCCGATCTGCTGCAGCAGGCCGCCAC
GCACTGAAGGAGACAGGGCC

Downstream 100 bases:

>100_bases
GGACAGCATAATGACACAGCACCAATTCGACGCCATCGTCGTGGGGGCCGGCCCGTCGGGGAACGCGGCGGCCTATACGA
TGGCGCAGCGCGGCCTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MNAKPTGGAPGGRANMKKELSERFQRYRHVWVFVEFEHGKIHPVSLELLGEGRKLADQLQVELAGIVLGSGRAELDEAAR
AAFSYGADVVYLADDPVLANYRNEPYTQVMTALVNAYEPEIVPSGRHGPGPRPGRRRRDDAKTGLTADCTELAIDGERSL
AATRPTFGGSLLCTIHTLNYRPQMATVRPRVMAMPEAQPGRTGRIVEFKVDVAEDSIITKVLDFLPDTANEAEQMAFADI
VVAGGMGLRSAENLGLVRDLAAVLGGDWGGSRPLVQKGWIPSDRQIGQTGKTIRPRLYIAAGISGAIQHRVGVEGADLIV
AINTDPNAPIFDFAHVGIVADAITLLPALTEAFGRRLSVNRMAS

Sequences:

>Translated_364_residues
MNAKPTGGAPGGRANMKKELSERFQRYRHVWVFVEFEHGKIHPVSLELLGEGRKLADQLQVELAGIVLGSGRAELDEAAR
AAFSYGADVVYLADDPVLANYRNEPYTQVMTALVNAYEPEIVPSGRHGPGPRPGRRRRDDAKTGLTADCTELAIDGERSL
AATRPTFGGSLLCTIHTLNYRPQMATVRPRVMAMPEAQPGRTGRIVEFKVDVAEDSIITKVLDFLPDTANEAEQMAFADI
VVAGGMGLRSAENLGLVRDLAAVLGGDWGGSRPLVQKGWIPSDRQIGQTGKTIRPRLYIAAGISGAIQHRVGVEGADLIV
AINTDPNAPIFDFAHVGIVADAITLLPALTEAFGRRLSVNRMAS
>Mature_364_residues
MNAKPTGGAPGGRANMKKELSERFQRYRHVWVFVEFEHGKIHPVSLELLGEGRKLADQLQVELAGIVLGSGRAELDEAAR
AAFSYGADVVYLADDPVLANYRNEPYTQVMTALVNAYEPEIVPSGRHGPGPRPGRRRRDDAKTGLTADCTELAIDGERSL
AATRPTFGGSLLCTIHTLNYRPQMATVRPRVMAMPEAQPGRTGRIVEFKVDVAEDSIITKVLDFLPDTANEAEQMAFADI
VVAGGMGLRSAENLGLVRDLAAVLGGDWGGSRPLVQKGWIPSDRQIGQTGKTIRPRLYIAAGISGAIQHRVGVEGADLIV
AINTDPNAPIFDFAHVGIVADAITLLPALTEAFGRRLSVNRMAS

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI4503607, Length=331, Percent_Identity=29.9093655589124, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI189181759, Length=193, Percent_Identity=39.3782383419689, Blast_Score=127, Evalue=2e-29,
Organism=Escherichia coli, GI1786226, Length=134, Percent_Identity=42.5373134328358, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787990, Length=122, Percent_Identity=44.2622950819672, Blast_Score=103, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17506929, Length=338, Percent_Identity=31.0650887573964, Blast_Score=139, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6325261, Length=304, Percent_Identity=29.6052631578947, Blast_Score=112, Evalue=1e-25,
Organism=Drosophila melanogaster, GI17136898, Length=339, Percent_Identity=30.0884955752212, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24652801, Length=339, Percent_Identity=30.0884955752212, Blast_Score=136, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 39225; Mature: 39225

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS00696 ETF_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKPTGGAPGGRANMKKELSERFQRYRHVWVFVEFEHGKIHPVSLELLGEGRKLADQLQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEECCCEEEEEEEEEECCCHHHHHHHH
VELAGIVLGSGRAELDEAARAAFSYGADVVYLADDPVLANYRNEPYTQVMTALVNAYEPE
EEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHCCCC
IVPSGRHGPGPRPGRRRRDDAKTGLTADCTELAIDGERSLAATRPTFGGSLLCTIHTLNY
CCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHEEECCCCCCEECCCCCCCEEEEEEEEECC
RPQMATVRPRVMAMPEAQPGRTGRIVEFKVDVAEDSIITKVLDFLPDTANEAEQMAFADI
CCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHH
VVAGGMGLRSAENLGLVRDLAAVLGGDWGGSRPLVQKGWIPSDRQIGQTGKTIRPRLYIA
HEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEE
AGISGAIQHRVGVEGADLIVAINTDPNAPIFDFAHVGIVADAITLLPALTEAFGRRLSVN
ECCCHHHHHHCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEECHH
RMAS
HCCC
>Mature Secondary Structure
MNAKPTGGAPGGRANMKKELSERFQRYRHVWVFVEFEHGKIHPVSLELLGEGRKLADQLQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEECCCEEEEEEEEEECCCHHHHHHHH
VELAGIVLGSGRAELDEAARAAFSYGADVVYLADDPVLANYRNEPYTQVMTALVNAYEPE
EEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHCCCC
IVPSGRHGPGPRPGRRRRDDAKTGLTADCTELAIDGERSLAATRPTFGGSLLCTIHTLNY
CCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHEEECCCCCCEECCCCCCCEEEEEEEEECC
RPQMATVRPRVMAMPEAQPGRTGRIVEFKVDVAEDSIITKVLDFLPDTANEAEQMAFADI
CCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHH
VVAGGMGLRSAENLGLVRDLAAVLGGDWGGSRPLVQKGWIPSDRQIGQTGKTIRPRLYIA
HEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEE
AGISGAIQHRVGVEGADLIVAINTDPNAPIFDFAHVGIVADAITLLPALTEAFGRRLSVN
ECCCHHHHHHCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEECHH
RMAS
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1850088 [H]