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The map label for this gene is fixA [H]

Identifier: 162146276

GI number: 162146276

Start: 447003

End: 447857

Strand: Direct

Name: fixA [H]

Synonym: GDI_0451

Alternate gene names: 162146276

Gene position: 447003-447857 (Clockwise)

Preceding gene: 162146275

Following gene: 162146277

Centisome position: 11.33

GC content: 66.9

Gene sequence:

>855_bases
ATGCAAATCTTTGTCTGTATCAAACAGGTTCCGGACAGCGGACAGATCCGCGTCCATCCGGTCACCAACACGATCATGCG
CCAGGGGGTGCCGACGATCATCAACCCCTACGACCTGTTCGGGCTGGAAGAGGCGCTGCGCCTGCGCGACCGGTTCGGCG
GCCAGGTCACGGTCATGACCATGGGGCCGCCGATGGCCGTCGAAAGCCTGCGCAAGGCGATGACCTTCGGCGCGGACCGT
GCCGTGCTGCTGACCGACCGGATTTTCGCCGGCTCGGACACGCTGGCCACCAGCTACGCGCTGGCGCAGCTGATCCGCAA
GGCCGGTGAAACCTGGGGCGAGCCGGATATCGTCTTCTGCGGCAAGCAGACGATCGACGGCGATACCGCGCAGGTGGGTC
CCGGCATCGCCCGTCGCCTGGGCCTGTCGCAGTTGACCTATGTGTCCGGTATCGATGACCTGGACATGGTGGACCGCAAG
ATCCTGGTCCGCCGCCGCGGGGACCATGGGGTGCAGGTCCTGCGCTCGGTGATGCCGGTCATGATCACGATGATGGAAGG
CAGCAACGAAATCCGGCGTGGAACCCAGGCTGACGCCCTGCGCGCCGCCCAGGCGGAAATCGTCCAGTGGAACGGCGCCG
CCGCCGGCATCGAGGATACGGCGATGTGCGGGCTCCGCGGGTCGCCGACCGTGGTGAAGAAGGTCTTCGCCCCCACGGCC
CGGGCCGAAAAGGCCGAGAAGATCGCGACCGGAACCGAAACGCCGGCCGCGCTGGCCGAAACGCTGATCGACGCCATCTT
CACCCGCCAGCCCGTGCTGCAGGCCGATCTGCTGCAGCAGGCCGCCACGCACTGA

Upstream 100 bases:

>100_bases
TTTTTCACGGTTGAGGGAATTTTCGCCCCGTTTGGCCTCGCTGGTACGCCTCTTGCGACCCGTGGAAACATGACATCCTG
CATGTCGATGGAGGCGCGGA

Downstream 100 bases:

>100_bases
AGGAGACAGGGCCATGAACGCCAAACCGACGGGCGGGGCACCGGGCGGCCGCGCCAATATGAAGAAGGAATTGTCGGAGC
GCTTCCAGCGCTACCGCCAT

Product: protein fixA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQIFVCIKQVPDSGQIRVHPVTNTIMRQGVPTIINPYDLFGLEEALRLRDRFGGQVTVMTMGPPMAVESLRKAMTFGADR
AVLLTDRIFAGSDTLATSYALAQLIRKAGETWGEPDIVFCGKQTIDGDTAQVGPGIARRLGLSQLTYVSGIDDLDMVDRK
ILVRRRGDHGVQVLRSVMPVMITMMEGSNEIRRGTQADALRAAQAEIVQWNGAAAGIEDTAMCGLRGSPTVVKKVFAPTA
RAEKAEKIATGTETPAALAETLIDAIFTRQPVLQADLLQQAATH

Sequences:

>Translated_284_residues
MQIFVCIKQVPDSGQIRVHPVTNTIMRQGVPTIINPYDLFGLEEALRLRDRFGGQVTVMTMGPPMAVESLRKAMTFGADR
AVLLTDRIFAGSDTLATSYALAQLIRKAGETWGEPDIVFCGKQTIDGDTAQVGPGIARRLGLSQLTYVSGIDDLDMVDRK
ILVRRRGDHGVQVLRSVMPVMITMMEGSNEIRRGTQADALRAAQAEIVQWNGAAAGIEDTAMCGLRGSPTVVKKVFAPTA
RAEKAEKIATGTETPAALAETLIDAIFTRQPVLQADLLQQAATH
>Mature_284_residues
MQIFVCIKQVPDSGQIRVHPVTNTIMRQGVPTIINPYDLFGLEEALRLRDRFGGQVTVMTMGPPMAVESLRKAMTFGADR
AVLLTDRIFAGSDTLATSYALAQLIRKAGETWGEPDIVFCGKQTIDGDTAQVGPGIARRLGLSQLTYVSGIDDLDMVDRK
ILVRRRGDHGVQVLRSVMPVMITMMEGSNEIRRGTQADALRAAQAEIVQWNGAAAGIEDTAMCGLRGSPTVVKKVFAPTA
RAEKAEKIATGTETPAALAETLIDAIFTRQPVLQADLLQQAATH

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=215, Percent_Identity=29.3023255813954, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI62420877, Length=202, Percent_Identity=30.1980198019802, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25141345, Length=208, Percent_Identity=31.25, Blast_Score=91, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6321646, Length=188, Percent_Identity=28.7234042553192, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24651147, Length=184, Percent_Identity=27.7173913043478, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24651145, Length=184, Percent_Identity=27.7173913043478, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 30718; Mature: 30718

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIFVCIKQVPDSGQIRVHPVTNTIMRQGVPTIINPYDLFGLEEALRLRDRFGGQVTVMT
CEEEEEEECCCCCCCEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
MGPPMAVESLRKAMTFGADRAVLLTDRIFAGSDTLATSYALAQLIRKAGETWGEPDIVFC
CCCCHHHHHHHHHHHCCCCCEEEEECCEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE
GKQTIDGDTAQVGPGIARRLGLSQLTYVSGIDDLDMVDRKILVRRRGDHGVQVLRSVMPV
CCCCCCCCCHHCCCHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
MITMMEGSNEIRRGTQADALRAAQAEIVQWNGAAAGIEDTAMCGLRGSPTVVKKVFAPTA
HHHHHCCCHHHHCCCHHHHHHHHHHHHEEECCCCCCCCHHHCCCCCCCHHHHHHHHCCHH
RAEKAEKIATGTETPAALAETLIDAIFTRQPVLQADLLQQAATH
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQIFVCIKQVPDSGQIRVHPVTNTIMRQGVPTIINPYDLFGLEEALRLRDRFGGQVTVMT
CEEEEEEECCCCCCCEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
MGPPMAVESLRKAMTFGADRAVLLTDRIFAGSDTLATSYALAQLIRKAGETWGEPDIVFC
CCCCHHHHHHHHHHHCCCCCEEEEECCEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE
GKQTIDGDTAQVGPGIARRLGLSQLTYVSGIDDLDMVDRKILVRRRGDHGVQVLRSVMPV
CCCCCCCCCHHCCCHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
MITMMEGSNEIRRGTQADALRAAQAEIVQWNGAAAGIEDTAMCGLRGSPTVVKKVFAPTA
HHHHHCCCHHHHCCCHHHHHHHHHHHHEEECCCCCCCCHHHCCCCCCCHHHHHHHHCCHH
RAEKAEKIATGTETPAALAETLIDAIFTRQPVLQADLLQQAATH
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]