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The map label for this gene is yfhH [C]

Identifier: 162146187

GI number: 162146187

Start: 371140

End: 371997

Strand: Reverse

Name: yfhH [C]

Synonym: GDI_0359

Alternate gene names: 162146187

Gene position: 371997-371140 (Counterclockwise)

Preceding gene: 162146188

Following gene: 162146186

Centisome position: 9.43

GC content: 66.9

Gene sequence:

>858_bases
ATGCCCAACGACATGGCCGCCGGATCGATCCCGATTCAGGATTTCGATGTGCTGCGCGACGATATTCGCGCCCGCTACGA
TTCGCTGCCGAAGCGGCTGGCCCAGGTGGCGGATGCGATCATGGCGGCGCCGGACGATTTCACCTTCGGGACCGTCAGCA
GCGTCGCGGCCGTGGCGGGCGTCCAGCCTTCCACCATCATCCGCTTCGCACGGGCCTTTGGATTTCACGGGTTTTCCGAC
ATGCAGGTGGTCTTCCGCGAGCGCCTGCGCGGCCGGGCCTCGACCTACCAGACGCGGCTGGATGCCCTGCGGGGCCCCGA
CGGCGCCAGCCCGCCGGCCACGATGCTGCTGGAGGGTTTCGCCCACGCACTGGAACAGTCGCTGACGCGCCTGCGTGCCG
GCATCGACGCCGAGCGTCTGGAACGCGCCTGCGCCGTCCTGGCCGAGGCCGAGACCCTGTTCGTCCTGGGGCTGCGGCGG
TCCGCGCCGGTGGCGGATTACCTGTCGTACCTGCTGAACAAACTGTCGATCCGCCATGTCGATGTCCGGTCGGCCACCGG
CATGGAGGACGAGATCGCGTCCTTCGCCACGCACCGCGACGCCGCGATCGTCATCAGCTATTCGCCCTATGCCCGGCGTA
CGATCGAAGTGTTCAACCAGTTCCAGGCGGTGGGCGTGCCGACGATCGTGCTGACCGACAGTCCGTTCAGCCCCGTCGTG
CCCGCCGGCGGGCTGTGGTTCGAGATTCTGGAACAGGATTTCCAGGGCTTCCGGTCCAATGCCGCCGCGACGGCGCTGGT
GATGACGCTGGCCACGTCGGTGGCCAAAATCCGTGACGTAAAGGGCAGAAAACGGTAA

Upstream 100 bases:

>100_bases
GCCGAAATCCCGGCGCGGGCGGCCTGAACATGAATGTTCCATTGCATTTCATTCCGTGAAATAACCGACCCCATATCCCC
TTGCCCGATACGAGAGCACG

Downstream 100 bases:

>100_bases
CGGCCGCCCCGTCCGCGGGCAGCACAAACGCGTGAGAAGCGCGCGGGCCGGGGCGGATGACGCGTTTGCGCCTTGACCTT
GCGGGGACAAGAACGGAATG

Product: sugar isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPNDMAAGSIPIQDFDVLRDDIRARYDSLPKRLAQVADAIMAAPDDFTFGTVSSVAAVAGVQPSTIIRFARAFGFHGFSD
MQVVFRERLRGRASTYQTRLDALRGPDGASPPATMLLEGFAHALEQSLTRLRAGIDAERLERACAVLAEAETLFVLGLRR
SAPVADYLSYLLNKLSIRHVDVRSATGMEDEIASFATHRDAAIVISYSPYARRTIEVFNQFQAVGVPTIVLTDSPFSPVV
PAGGLWFEILEQDFQGFRSNAAATALVMTLATSVAKIRDVKGRKR

Sequences:

>Translated_285_residues
MPNDMAAGSIPIQDFDVLRDDIRARYDSLPKRLAQVADAIMAAPDDFTFGTVSSVAAVAGVQPSTIIRFARAFGFHGFSD
MQVVFRERLRGRASTYQTRLDALRGPDGASPPATMLLEGFAHALEQSLTRLRAGIDAERLERACAVLAEAETLFVLGLRR
SAPVADYLSYLLNKLSIRHVDVRSATGMEDEIASFATHRDAAIVISYSPYARRTIEVFNQFQAVGVPTIVLTDSPFSPVV
PAGGLWFEILEQDFQGFRSNAAATALVMTLATSVAKIRDVKGRKR
>Mature_284_residues
PNDMAAGSIPIQDFDVLRDDIRARYDSLPKRLAQVADAIMAAPDDFTFGTVSSVAAVAGVQPSTIIRFARAFGFHGFSDM
QVVFRERLRGRASTYQTRLDALRGPDGASPPATMLLEGFAHALEQSLTRLRAGIDAERLERACAVLAEAETLFVLGLRRS
APVADYLSYLLNKLSIRHVDVRSATGMEDEIASFATHRDAAIVISYSPYARRTIEVFNQFQAVGVPTIVLTDSPFSPVVP
AGGLWFEILEQDFQGFRSNAAATALVMTLATSVAKIRDVKGRKR

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31112; Mature: 30981

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDMAAGSIPIQDFDVLRDDIRARYDSLPKRLAQVADAIMAAPDDFTFGTVSSVAAVAG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
VQPSTIIRFARAFGFHGFSDMQVVFRERLRGRASTYQTRLDALRGPDGASPPATMLLEGF
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AHALEQSLTRLRAGIDAERLERACAVLAEAETLFVLGLRRSAPVADYLSYLLNKLSIRHV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHEE
DVRSATGMEDEIASFATHRDAAIVISYSPYARRTIEVFNQFQAVGVPTIVLTDSPFSPVV
ECCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
PAGGLWFEILEQDFQGFRSNAAATALVMTLATSVAKIRDVKGRKR
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PNDMAAGSIPIQDFDVLRDDIRARYDSLPKRLAQVADAIMAAPDDFTFGTVSSVAAVAG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
VQPSTIIRFARAFGFHGFSDMQVVFRERLRGRASTYQTRLDALRGPDGASPPATMLLEGF
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AHALEQSLTRLRAGIDAERLERACAVLAEAETLFVLGLRRSAPVADYLSYLLNKLSIRHV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHEE
DVRSATGMEDEIASFATHRDAAIVISYSPYARRTIEVFNQFQAVGVPTIVLTDSPFSPVV
ECCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
PAGGLWFEILEQDFQGFRSNAAATALVMTLATSVAKIRDVKGRKR
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]