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The map label for this gene is ywoC [H]

Identifier: 162146176

GI number: 162146176

Start: 360264

End: 360821

Strand: Direct

Name: ywoC [H]

Synonym: GDI_0348

Alternate gene names: 162146176

Gene position: 360264-360821 (Clockwise)

Preceding gene: 162146175

Following gene: 162146177

Centisome position: 9.13

GC content: 71.86

Gene sequence:

>558_bases
ATGACCCTCACCGTTCTCGACCCCAGGACCGCCCTGGTCGTCATCGACCTGCAGAAGGGCATCGTCGGCTTTCCGACCGT
CCATCCCGTCGCGGGCATCGTGGCCTCCGCCGCCGCGCTGGCCGCCGCGTTCCGCCGGCGCGGCCTGCCGGTGGTGCTGG
TCAACGTGACGGGCGGCGCGCCGGGCCGCACGGAACGCAGCTTCAGCCTGGACGGCATGCCGCCGGACTGGGCCGACCTG
GTGCCCGAACTGGACGCCCAGCCCGGCGACCTGCGCGTGACCAAGACAACATGGGGCGCCTTCGCCAGCACCGACCTTGC
GCGGCAGTTGCGGGCGCTCGGCGTCACCCAGGTGGTGCTGGCCGGCATCGCCACCAGCCTCGGCGTCGAATCGACGGCGC
GCGAGGCCCATGCGATGGGCCTCAACGTCACCCTGGCGCTGGACGCCATGACCGACCTCAGCCCCGAGGCGCACGACAAC
AGCGTCCAGCGGATCTTCCCGCGACTGGGCGAGACCGGGTCCACCCGGCAGGTCATCGACCTTCTCGAACGCGGATGA

Upstream 100 bases:

>100_bases
CGTGCAGGCCAGGCTGACGGCCCCGGAACAGGACCAGCTCGCCGCCGCCGTCGATCTTCTCAAACGCCTCCTCGATCCCT
GACAAGCGCAAGGCATTCCC

Downstream 100 bases:

>100_bases
ACCTACCCCCGGCCGACCGGCTCGCCCCCGGCGCGTGGCGCGTGGTGTGCGTCGCCGCCATCGGGTCGTTCATGGCGCAG
CTCGACGCCACGGTCGTCAA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTLTVLDPRTALVVIDLQKGIVGFPTVHPVAGIVASAAALAAAFRRRGLPVVLVNVTGGAPGRTERSFSLDGMPPDWADL
VPELDAQPGDLRVTKTTWGAFASTDLARQLRALGVTQVVLAGIATSLGVESTAREAHAMGLNVTLALDAMTDLSPEAHDN
SVQRIFPRLGETGSTRQVIDLLERG

Sequences:

>Translated_185_residues
MTLTVLDPRTALVVIDLQKGIVGFPTVHPVAGIVASAAALAAAFRRRGLPVVLVNVTGGAPGRTERSFSLDGMPPDWADL
VPELDAQPGDLRVTKTTWGAFASTDLARQLRALGVTQVVLAGIATSLGVESTAREAHAMGLNVTLALDAMTDLSPEAHDN
SVQRIFPRLGETGSTRQVIDLLERG
>Mature_184_residues
TLTVLDPRTALVVIDLQKGIVGFPTVHPVAGIVASAAALAAAFRRRGLPVVLVNVTGGAPGRTERSFSLDGMPPDWADLV
PELDAQPGDLRVTKTTWGAFASTDLARQLRALGVTQVVLAGIATSLGVESTAREAHAMGLNVTLALDAMTDLSPEAHDNS
VQRIFPRLGETGSTRQVIDLLERG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=180, Percent_Identity=40.5555555555556, Blast_Score=124, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016291
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19413; Mature: 19281

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTVLDPRTALVVIDLQKGIVGFPTVHPVAGIVASAAALAAAFRRRGLPVVLVNVTGGA
CEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
PGRTERSFSLDGMPPDWADLVPELDAQPGDLRVTKTTWGAFASTDLARQLRALGVTQVVL
CCCCCCCEECCCCCCCHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
AGIATSLGVESTAREAHAMGLNVTLALDAMTDLSPEAHDNSVQRIFPRLGETGSTRQVID
HHHHHHCCCCHHHHHHHHCCCEEEEEEECHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHH
LLERG
HHHCC
>Mature Secondary Structure 
TLTVLDPRTALVVIDLQKGIVGFPTVHPVAGIVASAAALAAAFRRRGLPVVLVNVTGGA
EEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
PGRTERSFSLDGMPPDWADLVPELDAQPGDLRVTKTTWGAFASTDLARQLRALGVTQVVL
CCCCCCCEECCCCCCCHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
AGIATSLGVESTAREAHAMGLNVTLALDAMTDLSPEAHDNSVQRIFPRLGETGSTRQVID
HHHHHHCCCCHHHHHHHHCCCEEEEEEECHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHH
LLERG
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]