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The map label for this gene is dppC [H]

Identifier: 162146080

GI number: 162146080

Start: 258692

End: 259507

Strand: Direct

Name: dppC [H]

Synonym: GDI_0249

Alternate gene names: 162146080

Gene position: 258692-259507 (Clockwise)

Preceding gene: 162146079

Following gene: 162146081

Centisome position: 6.56

GC content: 73.16

Gene sequence:

>816_bases
ATGAGGGTGCCCGCGCGACCCGGGGCCGCGCTGGCGGCGTCCTGGCTGCTGCTGGGCCTGCTGCTGGCCATGGTGGCCGA
CCCGGCCCTGTTCACCCGCTACAGCGCCACGGCGGGGGCCGCGGTCGAACATCTGCGCGCGCCCGGCGGGGCGCACTGGT
TCGGCACCGACCAGCTCGGGCGGGACGTGTTCGCCCGGATCGTCTACGGCGCCCATCATACGCTGCCGGCCGCGCTGCTG
GCGGTGGCGACGGGCTTGGTGTGCGGCACCTTCATCGGCGCCCTGGCGGGTGCCGCGGGCGGGCGGATCGATGCCGCGCT
GACCGGCCTGATGGACGTCCTGATGGCGATCCCCGAACTGCTGATGTCGCTGACCATCGTGATCCTGCTTGGGTTCGGCA
CGTTCCATGCCGCCATTGCCGTGGGGGTCGGCCAGATCGCCGGCTTCGCCCGCATCGTGCGGGCCGACGTGACGCGGGTC
GGCGCCATGACGTTCGTCGAGGCCGCGCGCGGCAGCGGCGCCACCTTCGCCGGCCTGCTGTGGCGGCACATCCTGCCCAA
CTGCGCGGCGTCGATCCTGGGCCTGTCGGTGCTGCGCTACAGCACCGCGATCCTGTCGATCGCCACCCTCGGCTTCCTCG
GCTACGGCGCGCCGCCGCCGGCGCCGGAATGGGGGCTGATGATTGCGGAAGGCCGCGACTACCTGACCACGGCATGGTGG
ATGACGACCTTCCCCGGCCTCGCCGTGCTGCTGGTCGCCCTGGCCGTCAACCGGATCAGCCGCACCCTGGCCGATCCGTC
CGGCCCGCGCCCATGA

Upstream 100 bases:

>100_bases
TGGTCATGATCTCGGCGGCGGCCTATGTCAGCATCAACCTGGTCGTGGACCTGCTGTATCCGGTGTTGAACCCGACCCTG
CGCCATCGGACCCGCGCGCC

Downstream 100 bases:

>100_bases
GCCCGATACCCATGAATACCGTGCTGGAGGTCGAGGACCTGCGTATCGCCTACCACGGCAAAACGGTGGTGCACGGCGTA
TCGTTCCAGGCGGCGAGGGG

Product: dipeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRVPARPGAALAASWLLLGLLLAMVADPALFTRYSATAGAAVEHLRAPGGAHWFGTDQLGRDVFARIVYGAHHTLPAALL
AVATGLVCGTFIGALAGAAGGRIDAALTGLMDVLMAIPELLMSLTIVILLGFGTFHAAIAVGVGQIAGFARIVRADVTRV
GAMTFVEAARGSGATFAGLLWRHILPNCAASILGLSVLRYSTAILSIATLGFLGYGAPPPAPEWGLMIAEGRDYLTTAWW
MTTFPGLAVLLVALAVNRISRTLADPSGPRP

Sequences:

>Translated_271_residues
MRVPARPGAALAASWLLLGLLLAMVADPALFTRYSATAGAAVEHLRAPGGAHWFGTDQLGRDVFARIVYGAHHTLPAALL
AVATGLVCGTFIGALAGAAGGRIDAALTGLMDVLMAIPELLMSLTIVILLGFGTFHAAIAVGVGQIAGFARIVRADVTRV
GAMTFVEAARGSGATFAGLLWRHILPNCAASILGLSVLRYSTAILSIATLGFLGYGAPPPAPEWGLMIAEGRDYLTTAWW
MTTFPGLAVLLVALAVNRISRTLADPSGPRP
>Mature_271_residues
MRVPARPGAALAASWLLLGLLLAMVADPALFTRYSATAGAAVEHLRAPGGAHWFGTDQLGRDVFARIVYGAHHTLPAALL
AVATGLVCGTFIGALAGAAGGRIDAALTGLMDVLMAIPELLMSLTIVILLGFGTFHAAIAVGVGQIAGFARIVRADVTRV
GAMTFVEAARGSGATFAGLLWRHILPNCAASILGLSVLRYSTAILSIATLGFLGYGAPPPAPEWGLMIAEGRDYLTTAWW
MTTFPGLAVLLVALAVNRISRTLADPSGPRP

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=251, Percent_Identity=37.8486055776892, Blast_Score=170, Evalue=7e-44,
Organism=Escherichia coli, GI1787054, Length=247, Percent_Identity=40.080971659919, Blast_Score=167, Evalue=5e-43,
Organism=Escherichia coli, GI1789964, Length=220, Percent_Identity=39.0909090909091, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1789889, Length=237, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1787549, Length=207, Percent_Identity=35.7487922705314, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787498, Length=220, Percent_Identity=29.0909090909091, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1788505, Length=224, Percent_Identity=29.9107142857143, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27977; Mature: 27977

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVPARPGAALAASWLLLGLLLAMVADPALFTRYSATAGAAVEHLRAPGGAHWFGTDQLG
CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RDVFARIVYGAHHTLPAALLAVATGLVCGTFIGALAGAAGGRIDAALTGLMDVLMAIPEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LMSLTIVILLGFGTFHAAIAVGVGQIAGFARIVRADVTRVGAMTFVEAARGSGATFAGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
WRHILPNCAASILGLSVLRYSTAILSIATLGFLGYGAPPPAPEWGLMIAEGRDYLTTAWW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHH
MTTFPGLAVLLVALAVNRISRTLADPSGPRP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRVPARPGAALAASWLLLGLLLAMVADPALFTRYSATAGAAVEHLRAPGGAHWFGTDQLG
CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RDVFARIVYGAHHTLPAALLAVATGLVCGTFIGALAGAAGGRIDAALTGLMDVLMAIPEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LMSLTIVILLGFGTFHAAIAVGVGQIAGFARIVRADVTRVGAMTFVEAARGSGATFAGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
WRHILPNCAASILGLSVLRYSTAILSIATLGFLGYGAPPPAPEWGLMIAEGRDYLTTAWW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHH
MTTFPGLAVLLVALAVNRISRTLADPSGPRP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]