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The map label for this gene is yagA [C]

Identifier: 162146054

GI number: 162146054

Start: 238026

End: 239072

Strand: Reverse

Name: yagA [C]

Synonym: GDI_0222

Alternate gene names: 162146054

Gene position: 239072-238026 (Counterclockwise)

Preceding gene: 162146056

Following gene: 162146052

Centisome position: 6.06

GC content: 56.26

Gene sequence:

>1047_bases
ATGGGCCAGGTTCACCACGGAAGCGCCACGACGACAGCGGCAGTCCGTCGAGCGATACAACATAGTCAAGAGAGCCTGAG
GGTTCTGGCGAAACGCTACGGGATCAACCCGAAGACGGTCGCCAAATGGAAGGGGCGGACCGATACGTCGGATCGACGCA
CCGGTCCGAAGGTCGCATCCTCAACCATCCTGTCGACCGAAGAAGAAGCGATCGTTGTGGCCTTCCGTCGCCATACCCTG
CTGCCTCTTGATGATTGCCTTTATGCGCTTCAGGCGACGATCCCGCATCTGACGCGATCTTCCCTGCACCGTTGTTTTCA
GCGCCATGGGATCAGCCGCCTGCCCGAGACCGAAGGCGACAAACCGAAACGGTCGAAGTTCAAGAGTTGTCCGATCGGCT
ATTTTCACATCGACATTGCTGAAGTCCGCACTGAAATGGGGCGCCTTTATCTTCTGGTGGCGATCGACCGGACCTCGAAA
TTCGCTTTTGTCCAATTGCACGAGAAAGCGACACGTCGCGTTGCCGGTGACTTCCTGCGTGCTCTGGCCGCTGCGGTTCC
CTACCGCATCCATACCGTGCTGACCGATAACGGCACGCATTTTACCGATCCGGCCGGCAATGGATGGACACCCGAAGACA
TCAAGGCCATGCGGGCGGATGGTGTCCTGTTCCGGTGCCACTCTTTTGAACTGGCCTGTGCTGATCTCGATATCGAGCAT
CGACTGACAAAGCCGCGACATCCCTGGACGAATGGCCAGGTCGAGAGGATGAACCGCACGATCAAGGACGCCACCGTCAA
GCGCTTCTACTACGAAACACATGACCAGTTGCGTCAACACCTCGCCGACTTCGTTACCGCCTACAATTTCGCCCGCAGGC
TCAAGACCCTGCGCGGCCTCACTCCATATGAATTCATTTGTCAGCAGTGGGAAAAAGAACCATCACGGTTCATACATAAT
CCGCACCACCAAATCCCGGGACAAAACACCTACCGAATCCTACAATCGCGTAGCGCATTGTGCTTTTCCGATCCATGTTC
ATATTGA

Upstream 100 bases:

>100_bases
TTCCTGCGGGCGAAGGCGTGGGCAAGGGCCTGGCCTATCCTACGTGTTTGGTCCCGGGATTTGGTGGTGCATTATTTTCA
CATGAGTGGAAGGATGCGCT

Downstream 100 bases:

>100_bases
TGCTGCGGACAGGCCGACCGTGCAGCGCGGAAGTCGTTCCACCATGGACACGCCCGTCCCCGCCGGTCGGCCGCTTTCCG
CGATCCGGCGCGCGTTCAGA

Product: integrase

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Transcriptional Regulator; Integrase; Integrase Catalytic Domain-Containing Protein; Integrase Protein; Integrase Catalytic Core; Fis Family Transcriptional Regulator; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Hypothethical Protein Transposase; Instegrase; Noncomposite Transposon Transposase; Transposase Of

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MGQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVASSTILSTEEEAIVVAFRRHTL
LPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGDKPKRSKFKSCPIGYFHIDIAEVRTEMGRLYLLVAIDRTSK
FAFVQLHEKATRRVAGDFLRALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHN
PHHQIPGQNTYRILQSRSALCFSDPCSY

Sequences:

>Translated_348_residues
MGQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVASSTILSTEEEAIVVAFRRHTL
LPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGDKPKRSKFKSCPIGYFHIDIAEVRTEMGRLYLLVAIDRTSK
FAFVQLHEKATRRVAGDFLRALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHN
PHHQIPGQNTYRILQSRSALCFSDPCSY
>Mature_347_residues
GQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVASSTILSTEEEAIVVAFRRHTLL
PLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGDKPKRSKFKSCPIGYFHIDIAEVRTEMGRLYLLVAIDRTSKF
AFVQLHEKATRRVAGDFLRALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEHR
LTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGLTPYEFICQQWEKEPSRFIHNP
HHQIPGQNTYRILQSRSALCFSDPCSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39932; Mature: 39801

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCHHHH
STILSTEEEAIVVAFRRHTLLPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGD
HHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KPKRSKFKSCPIGYFHIDIAEVRTEMGRLYLLVAIDRTSKFAFVQLHEKATRRVAGDFLR
CCHHHHHCCCCCEEEEEEHHHHHHHHCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHH
ALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
HHHHHCCEEEEEEEECCCCEECCCCCCCCCHHHHHHHHHCCEEEEEECCEEEEECCCHHH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPYEFICQQWEKEPSRFIHNPHHQIPGQNTYRILQSRSALCFSDPCSY
CHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHCCCCEECCCCCCC
>Mature Secondary Structure 
GQVHHGSATTTAAVRRAIQHSQESLRVLAKRYGINPKTVAKWKGRTDTSDRRTGPKVAS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCHHHH
STILSTEEEAIVVAFRRHTLLPLDDCLYALQATIPHLTRSSLHRCFQRHGISRLPETEGD
HHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KPKRSKFKSCPIGYFHIDIAEVRTEMGRLYLLVAIDRTSKFAFVQLHEKATRRVAGDFLR
CCHHHHHCCCCCEEEEEEHHHHHHHHCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHH
ALAAAVPYRIHTVLTDNGTHFTDPAGNGWTPEDIKAMRADGVLFRCHSFELACADLDIEH
HHHHHCCEEEEEEEECCCCEECCCCCCCCCHHHHHHHHHCCEEEEEECCEEEEECCCHHH
RLTKPRHPWTNGQVERMNRTIKDATVKRFYYETHDQLRQHLADFVTAYNFARRLKTLRGL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPYEFICQQWEKEPSRFIHNPHHQIPGQNTYRILQSRSALCFSDPCSY
CHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA