| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162146042
Identifier: 162146042
GI number: 162146042
Start: 226988
End: 228325
Strand: Direct
Name: 162146042
Synonym: GDI_0210
Alternate gene names: NA
Gene position: 226988-228325 (Clockwise)
Preceding gene: 162146041
Following gene: 162146043
Centisome position: 5.76
GC content: 66.89
Gene sequence:
>1338_bases ATGAAGATCGGCCTGACCGGTGATTCGATTCTCTTTCGGCGCCTGAACAGCACGCAGGATGCCGAAATCCGGCCGCTGTT CGACCTGATCCGGAGCTGTGACGTCAGTTTCACGAACCTTGAGCTGGTATCGAACGATTTCATGGGGGACCCGTCCCTGG ACCATGGTGGCACGCATTTCGGCGCGCCGTCCTGGGTGCTGGACGAACTGCGCGACGCCGGGTTCGACCTGTTCGCGGCC GCGACCAATCACAGTCTCGATTACGGTGTCGCGGGCCTGCGGGCCATGCTGGCGGCGCTCGACCGGCGTGACCTGCTCCA TGCCGGGATCGGTGCGAACCTGGAAGAGGCGCGGCGACCGGTCTATTGCACCCGGCCGGCCGGCACGGTCGCCCTGCTGT CCTGCGTGTCCACCTTTGCCCGGGGGCAGGAGGCAGCGGCACAGACGGCGCTGATGCCGGGCCGCCCAGGTGTCAATCCG CTGCATTTCAAGCGCACGCATCACGTGACGGCGGACGACCTGGCCGATCTGACCCGGATCTACGAGCGGCTGGGCCTTCG GCATGTGCTGGACGAAAAGATCCGGCTGGGATTCGCATTTCCGCCCGCGCCCGGCACGTTGTCCTTCGACGGCGTATGCT TCGCCGCGTCCGACACGGTCCGCACCCGTACGGAGGCCGACGCGGCGGATGTCGCGGACATCGCGCGCTGGATCGGCGAA GCGCGGCTGGTGTCGGACGTCGTGATCGTCAGCGTGCATGCGCATGAAAGCGGATATAATGCCGACGGCATCCCCGATGT CGAAATTCCCGACGATTTCCTGCGTGCCTTCACGCACGCGGCGGTGGATGCGGGGGCGGATGTCGTCGTCTGTCACGGCC CGCATCTGTTGCGCGGGCTGGAACTGTATCGCGGCCGCCCGATCTTTCACGGCCTGGGCAATTTCATCGGCCAGAACGAA CTCGTCGCACGCCTGCCGATGGATTCCTACGCCGCCTATCGCTGCTCGTCCGACGTCACGCCGCATCGCCTCTACAAGGG GCGCAGCGAAAACGACCGCAAGGGTTTCCCCGCGGACCAGCGCTTCTGGGACAGCGTGGTACCGGTCTGCGCCTACGAGG GGGGCACGCTGTCGGGGATCGACATCCATCCGGTGTCGCTGGGGCTGGGACGGTCGGCCCATCGTCGCGGGACGCCGATG CTGGCCCAGGGGGCCGAGGCCACGCGTATTCTCGAGGCCTTTGCGGCCCTGTCCCGCCCCTTCGGCACCGAACTGACGAT CGCGGACGGGTCGATCCGGCTTCCCCTTGTGCCCGCGGCCGCCGGAATGGACGCCTGA
Upstream 100 bases:
>100_bases GCAGCCACAACCCCTACGAGGCCATGGAATTCGAGGATTTCGCCCTGGCGACGCGGCTGCTCGAACGGCTGCTGTACCGG CATGCGGAGCAAGGATGATG
Downstream 100 bases:
>100_bases CGTCGTGGCCACCTGTTTCATCACCCAGCCGATCCACCCCGACGCGGTAGCGCATCTGAACGGCGCGGGCATCGCCACGT GCTATGCCAGCCGCGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKIGLTGDSILFRRLNSTQDAEIRPLFDLIRSCDVSFTNLELVSNDFMGDPSLDHGGTHFGAPSWVLDELRDAGFDLFAA ATNHSLDYGVAGLRAMLAALDRRDLLHAGIGANLEEARRPVYCTRPAGTVALLSCVSTFARGQEAAAQTALMPGRPGVNP LHFKRTHHVTADDLADLTRIYERLGLRHVLDEKIRLGFAFPPAPGTLSFDGVCFAASDTVRTRTEADAADVADIARWIGE ARLVSDVVIVSVHAHESGYNADGIPDVEIPDDFLRAFTHAAVDAGADVVVCHGPHLLRGLELYRGRPIFHGLGNFIGQNE LVARLPMDSYAAYRCSSDVTPHRLYKGRSENDRKGFPADQRFWDSVVPVCAYEGGTLSGIDIHPVSLGLGRSAHRRGTPM LAQGAEATRILEAFAALSRPFGTELTIADGSIRLPLVPAAAGMDA
Sequences:
>Translated_445_residues MKIGLTGDSILFRRLNSTQDAEIRPLFDLIRSCDVSFTNLELVSNDFMGDPSLDHGGTHFGAPSWVLDELRDAGFDLFAA ATNHSLDYGVAGLRAMLAALDRRDLLHAGIGANLEEARRPVYCTRPAGTVALLSCVSTFARGQEAAAQTALMPGRPGVNP LHFKRTHHVTADDLADLTRIYERLGLRHVLDEKIRLGFAFPPAPGTLSFDGVCFAASDTVRTRTEADAADVADIARWIGE ARLVSDVVIVSVHAHESGYNADGIPDVEIPDDFLRAFTHAAVDAGADVVVCHGPHLLRGLELYRGRPIFHGLGNFIGQNE LVARLPMDSYAAYRCSSDVTPHRLYKGRSENDRKGFPADQRFWDSVVPVCAYEGGTLSGIDIHPVSLGLGRSAHRRGTPM LAQGAEATRILEAFAALSRPFGTELTIADGSIRLPLVPAAAGMDA >Mature_445_residues MKIGLTGDSILFRRLNSTQDAEIRPLFDLIRSCDVSFTNLELVSNDFMGDPSLDHGGTHFGAPSWVLDELRDAGFDLFAA ATNHSLDYGVAGLRAMLAALDRRDLLHAGIGANLEEARRPVYCTRPAGTVALLSCVSTFARGQEAAAQTALMPGRPGVNP LHFKRTHHVTADDLADLTRIYERLGLRHVLDEKIRLGFAFPPAPGTLSFDGVCFAASDTVRTRTEADAADVADIARWIGE ARLVSDVVIVSVHAHESGYNADGIPDVEIPDDFLRAFTHAAVDAGADVVVCHGPHLLRGLELYRGRPIFHGLGNFIGQNE LVARLPMDSYAAYRCSSDVTPHRLYKGRSENDRKGFPADQRFWDSVVPVCAYEGGTLSGIDIHPVSLGLGRSAHRRGTPM LAQGAEATRILEAFAALSRPFGTELTIADGSIRLPLVPAAAGMDA
Specific function: Could be involved in the biosynthesis of a cell wall component [H]
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019079 [H]
Pfam domain/function: PF09587 PGA_cap [H]
EC number: NA
Molecular weight: Translated: 48014; Mature: 48014
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGLTGDSILFRRLNSTQDAEIRPLFDLIRSCDVSFTNLELVSNDFMGDPSLDHGGTHF CEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCCCC GAPSWVLDELRDAGFDLFAAATNHSLDYGVAGLRAMLAALDRRDLLHAGIGANLEEARRP CCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC VYCTRPAGTVALLSCVSTFARGQEAAAQTALMPGRPGVNPLHFKRTHHVTADDLADLTRI EEEECCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHH YERLGLRHVLDEKIRLGFAFPPAPGTLSFDGVCFAASDTVRTRTEADAADVADIARWIGE HHHHCHHHHHHHHHHCCEECCCCCCCCCCCCEEEECCCCHHHCCCCCHHHHHHHHHHHHH ARLVSDVVIVSVHAHESGYNADGIPDVEIPDDFLRAFTHAAVDAGADVVVCHGPHLLRGL HHHHEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHH ELYRGRPIFHGLGNFIGQNELVARLPMDSYAAYRCSSDVTPHRLYKGRSENDRKGFPADQ HHHCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHH RFWDSVVPVCAYEGGTLSGIDIHPVSLGLGRSAHRRGTPMLAQGAEATRILEAFAALSRP HHHHHHCHHEEECCCEECCCEEEEEEECCCCCHHHCCCCHHHCCCHHHHHHHHHHHHCCC FGTELTIADGSIRLPLVPAAAGMDA CCCEEEEECCCEEEEEEECCCCCCC >Mature Secondary Structure MKIGLTGDSILFRRLNSTQDAEIRPLFDLIRSCDVSFTNLELVSNDFMGDPSLDHGGTHF CEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCCCC GAPSWVLDELRDAGFDLFAAATNHSLDYGVAGLRAMLAALDRRDLLHAGIGANLEEARRP CCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC VYCTRPAGTVALLSCVSTFARGQEAAAQTALMPGRPGVNPLHFKRTHHVTADDLADLTRI EEEECCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHH YERLGLRHVLDEKIRLGFAFPPAPGTLSFDGVCFAASDTVRTRTEADAADVADIARWIGE HHHHCHHHHHHHHHHCCEECCCCCCCCCCCCEEEECCCCHHHCCCCCHHHHHHHHHHHHH ARLVSDVVIVSVHAHESGYNADGIPDVEIPDDFLRAFTHAAVDAGADVVVCHGPHLLRGL HHHHEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHH ELYRGRPIFHGLGNFIGQNELVARLPMDSYAAYRCSSDVTPHRLYKGRSENDRKGFPADQ HHHCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHH RFWDSVVPVCAYEGGTLSGIDIHPVSLGLGRSAHRRGTPMLAQGAEATRILEAFAALSRP HHHHHHCHHEEECCCEECCCEEEEEEECCCCCHHHCCCCHHHCCCHHHHHHHHHHHHCCC FGTELTIADGSIRLPLVPAAAGMDA CCCEEEEECCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]