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The map label for this gene is cirA [C]

Identifier: 162146039

GI number: 162146039

Start: 221882

End: 224509

Strand: Reverse

Name: cirA [C]

Synonym: GDI_0207

Alternate gene names: 162146039

Gene position: 224509-221882 (Counterclockwise)

Preceding gene: 162146044

Following gene: 162146038

Centisome position: 5.69

GC content: 62.94

Gene sequence:

>2628_bases
GTGACGATGCCAAAGCATTCCGGGGCGAAGACTTTTCTTCTCGGCAGCGCCGCGATGGGCGCGCTTCTGCTGCAGGGCGC
CTTCGGCCCCGCCTATGCAGCCACGACATCGCCCGATCCGTCCGAGGTGACACAGCCCCGCAAGCCCGCGCGGCACAAGC
CCGCCCCCGCCACGCATGGCGCCCCCGCGCAGGGCGCCACGCAGCGGCAGGCCGCCGATAAAGCCGCGGCCAGCAGCGCG
CTGAAGACGTCGTCCGAGGATATTACCGTCAGCGGCACGGCCGCGCCCGGCAACAATGTGCTTTCGACCTCGACACGACG
CCACAGCACGACGCAGGTGACGGTCATCAGCGCATCGGACCTCAAGGCCACGGGCCAGACCAACCTGATCCAGGCATTGT
CGCAGATGATGCCATCCGTTTCGGCGCCCCCGCTGCCGGGCGTGGGCAACAATGCGTTCGTACAGACGATGCAGTTGCGC
GGCCTGTCCGCCGACCAGACGCTGATTCTGGTCAACGGGCACCGCCGGCATCTGGGCGCCAATTTCAATGCGAACGCCGG
ACCGAACTGGGGCACGGAACCCGCCGATATCTCCCTGATTCCGGTGGGCGCGGTGGACCATATCGAAGTCATTACGGAAG
GGGCGACCGCGCTCTACGGCCAGGATGCTATTGCGGGCGCGGTCAATATCGTCCTGAAGGAAGATACGCAGGGCCTGTCG
GCCAATTTCAAGAACAGCGGCTATTACGCGGGTGACGGACAGGCCCTGGACGGTTCGATCACCAAGGGGTTCGCGATCGG
CCGCCACGGCGGTTACCTCGACCTCTCCGCCCAGATCACCCATCAATTGCCGACCTCGCGCACGGGCGACTACATCAACC
CCGCGACGTATCCCAACGACCTGTATTATGCGCTGCCCGGCGGCCAGGTCGATCCGCGCGCCGCGGCGCTGGGCCGCAAC
ATCCAGCGCATCCTGGGCATCCCGAAGCAGACGCGCGAGTCGATTTCCGCCAATATGGGCATTCCCATTACCGACAGCAT
CAAGTTCTATTCGACCGACACCTATGGTCACCGACGCGTCAACGCGGCCGAGAATTTCCGGTCCGCGGCGGACGACCTGA
CCGTCAACGCAATCTGGCCGAACGGCATGCAGCCCTATCTCGACCTGGAGGAAAACGATTTCGAGGTCGATAACGGCTTC
AAGGGCACGACGGCCGGATTCAACTGGGACACCTATGTCAATTATGGCCGCGACATCCAGCGCTACTGGATGCAGGACAC
CGACAATCCCACCTATGGCGTGAACAGCCCGACGAAATTCGATACCGGTTCGGCCGTGACCAGCCAGTTGACGGCCGGCT
TCAGGGCGTCACACGCGCTCCGCCTGGGCTTCCTGCCCAAGCTGGCCAATGTGGAATTCGGCGCGGAATATCGTCGCGAC
ATGTTCGCCATGGGGCCGGGCGTCTACGAATCCTATGGCGACGGCGGCGTTCCGATCCTGGAAGGGCCGAACGCCGGCAA
GACCGCCAATCCGGGGTCGGCCGACCACGCGGGCAATCCCCCGCTGGCCGTCACCAACCAGAACCGCGACGTCTATGACG
GGCACGTCAATCTGGATTTCTACGTCCTGCCGCGTTGGGAATGGACGTTGGGCGGCCGCGCGACCAGCTATAACAACCTG
GCCACCGTGACGACCGGGTCGGTCGGCACGCGCTATAATTTCTCCGACCGGTTCGCGCTGCGGGCCAGCATCAACACCGG
CTATCGCCCCCCCACGCTCGGTCAGGAATATTATTTCTACTCGGCGCCTTTCGCGACCTATTCGATCGACCAGCTTCCCA
GCAACAGCGCGCCGGCCCGCGCCCTCGGCGCCCACGCGCTGAAGGGCGAGTATTCCCGCAGCTACAGCGTCGGCGTCGAT
GCGACACCGGTCGACAACTGGCATGTGACGGGAAATCTCTATTACATCGCAATCAACGACCGCCTGGCGAGCACCACGAC
ACTGGGCGGCGCGGGTGTGGGCGCATTGCTGGCCAGTGCCGGCCTGGGCAATGTAACCTATGCCTCGTACTATACGAATC
CGGTCAATACGGCGACCTACGGCGGCGATATCGCAACCGACTACTCCCTTCCTACCAGGCGGCTGGGGACGTTCCGTTTC
GCGTTCAGCGTCAGCCTGACCGACAACGAGATCCGCAGTTCCAATGCCGTGCCCCAGGTTCTTCAGAGCATGAATCTGGC
CTATTTCAATCAATATGCCCGGACCGTCCTGCTGCATTCGGCGCCCAAGAACCGCGAGAACCTGAGCATGAACTGGAGCC
GGGGCAGATGGTCGGCCTTCGTTCAGGAATCGCGCTACGGCTCTCTGATCTATGCGGCGACACCCAGCCTGCCGACCAAT
CTGTGGCTTGTCCAGCGGCCCGCCTTCATCACCAACATCGAAGTTTCCTACAGGGTCCTGCCGCAATGGACCGTCGCGGT
CGGCGCCAACAACCTCGGCGACAAATATCCCACGCGCCTGAACCCGAAATCGATCGCCACGTCCTTCAACGCCTATAAAT
ATTCGTTCTTTTCGCCCTACGGCTTCAACGGTGGAATGTACTATGTGCGAACGGGCCTGAATTTCTGA

Upstream 100 bases:

>100_bases
AATCTTGAAGAGCCATTTAGTTTCGTGCTCGTTATGTGTGTGATTTAGATATGTTCGCAGATCATTGCGGGCAGTCTGCC
GCCTACACATTTAGGAGGCC

Downstream 100 bases:

>100_bases
CCGGCCGCGCTCATCCCCCCGGTCGGATTTTCAGTTAGGCCCCCACACGCAGTTTACAGGATAGCGCCCCTTGCTGAATA
TCGTCCGCCCCGATGTCGTG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Ferric Enterobactin Receptor; NB Dependent Receptor Protein; Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB-Dependent Receptor-Like Protein; NB-Dependent Siderophore Receptor; NB-Dependent Receptor Domain Protein; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Receptor For Fe; NB Dependent Receptor; Outer Membrane Siderophore Receptor; Outer Membrane Receptor Family Protein; Ferric Enterobactin Receptor Protein; Vitamin; Fe Transporter; Aminotransferase Class V Family; NB-Dependent Outer Membrane Siderophore Receptor; NB-Dependent Membrane Receptor Protein; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane nB-Dependent Receptor; NB-Dependent Sideophore Receptor; Enterobactin Receptor; NB Dependent Ferric Enterobactin Receptor; Secreted nB-Dependent Receptor; Outer Membrane Receptor Proteins; Nb-Dependent Receptor Plug

Number of amino acids: Translated: 875; Mature: 874

Protein sequence:

>875_residues
MTMPKHSGAKTFLLGSAAMGALLLQGAFGPAYAATTSPDPSEVTQPRKPARHKPAPATHGAPAQGATQRQAADKAAASSA
LKTSSEDITVSGTAAPGNNVLSTSTRRHSTTQVTVISASDLKATGQTNLIQALSQMMPSVSAPPLPGVGNNAFVQTMQLR
GLSADQTLILVNGHRRHLGANFNANAGPNWGTEPADISLIPVGAVDHIEVITEGATALYGQDAIAGAVNIVLKEDTQGLS
ANFKNSGYYAGDGQALDGSITKGFAIGRHGGYLDLSAQITHQLPTSRTGDYINPATYPNDLYYALPGGQVDPRAAALGRN
IQRILGIPKQTRESISANMGIPITDSIKFYSTDTYGHRRVNAAENFRSAADDLTVNAIWPNGMQPYLDLEENDFEVDNGF
KGTTAGFNWDTYVNYGRDIQRYWMQDTDNPTYGVNSPTKFDTGSAVTSQLTAGFRASHALRLGFLPKLANVEFGAEYRRD
MFAMGPGVYESYGDGGVPILEGPNAGKTANPGSADHAGNPPLAVTNQNRDVYDGHVNLDFYVLPRWEWTLGGRATSYNNL
ATVTTGSVGTRYNFSDRFALRASINTGYRPPTLGQEYYFYSAPFATYSIDQLPSNSAPARALGAHALKGEYSRSYSVGVD
ATPVDNWHVTGNLYYIAINDRLASTTTLGGAGVGALLASAGLGNVTYASYYTNPVNTATYGGDIATDYSLPTRRLGTFRF
AFSVSLTDNEIRSSNAVPQVLQSMNLAYFNQYARTVLLHSAPKNRENLSMNWSRGRWSAFVQESRYGSLIYAATPSLPTN
LWLVQRPAFITNIEVSYRVLPQWTVAVGANNLGDKYPTRLNPKSIATSFNAYKYSFFSPYGFNGGMYYVRTGLNF

Sequences:

>Translated_875_residues
MTMPKHSGAKTFLLGSAAMGALLLQGAFGPAYAATTSPDPSEVTQPRKPARHKPAPATHGAPAQGATQRQAADKAAASSA
LKTSSEDITVSGTAAPGNNVLSTSTRRHSTTQVTVISASDLKATGQTNLIQALSQMMPSVSAPPLPGVGNNAFVQTMQLR
GLSADQTLILVNGHRRHLGANFNANAGPNWGTEPADISLIPVGAVDHIEVITEGATALYGQDAIAGAVNIVLKEDTQGLS
ANFKNSGYYAGDGQALDGSITKGFAIGRHGGYLDLSAQITHQLPTSRTGDYINPATYPNDLYYALPGGQVDPRAAALGRN
IQRILGIPKQTRESISANMGIPITDSIKFYSTDTYGHRRVNAAENFRSAADDLTVNAIWPNGMQPYLDLEENDFEVDNGF
KGTTAGFNWDTYVNYGRDIQRYWMQDTDNPTYGVNSPTKFDTGSAVTSQLTAGFRASHALRLGFLPKLANVEFGAEYRRD
MFAMGPGVYESYGDGGVPILEGPNAGKTANPGSADHAGNPPLAVTNQNRDVYDGHVNLDFYVLPRWEWTLGGRATSYNNL
ATVTTGSVGTRYNFSDRFALRASINTGYRPPTLGQEYYFYSAPFATYSIDQLPSNSAPARALGAHALKGEYSRSYSVGVD
ATPVDNWHVTGNLYYIAINDRLASTTTLGGAGVGALLASAGLGNVTYASYYTNPVNTATYGGDIATDYSLPTRRLGTFRF
AFSVSLTDNEIRSSNAVPQVLQSMNLAYFNQYARTVLLHSAPKNRENLSMNWSRGRWSAFVQESRYGSLIYAATPSLPTN
LWLVQRPAFITNIEVSYRVLPQWTVAVGANNLGDKYPTRLNPKSIATSFNAYKYSFFSPYGFNGGMYYVRTGLNF
>Mature_874_residues
TMPKHSGAKTFLLGSAAMGALLLQGAFGPAYAATTSPDPSEVTQPRKPARHKPAPATHGAPAQGATQRQAADKAAASSAL
KTSSEDITVSGTAAPGNNVLSTSTRRHSTTQVTVISASDLKATGQTNLIQALSQMMPSVSAPPLPGVGNNAFVQTMQLRG
LSADQTLILVNGHRRHLGANFNANAGPNWGTEPADISLIPVGAVDHIEVITEGATALYGQDAIAGAVNIVLKEDTQGLSA
NFKNSGYYAGDGQALDGSITKGFAIGRHGGYLDLSAQITHQLPTSRTGDYINPATYPNDLYYALPGGQVDPRAAALGRNI
QRILGIPKQTRESISANMGIPITDSIKFYSTDTYGHRRVNAAENFRSAADDLTVNAIWPNGMQPYLDLEENDFEVDNGFK
GTTAGFNWDTYVNYGRDIQRYWMQDTDNPTYGVNSPTKFDTGSAVTSQLTAGFRASHALRLGFLPKLANVEFGAEYRRDM
FAMGPGVYESYGDGGVPILEGPNAGKTANPGSADHAGNPPLAVTNQNRDVYDGHVNLDFYVLPRWEWTLGGRATSYNNLA
TVTTGSVGTRYNFSDRFALRASINTGYRPPTLGQEYYFYSAPFATYSIDQLPSNSAPARALGAHALKGEYSRSYSVGVDA
TPVDNWHVTGNLYYIAINDRLASTTTLGGAGVGALLASAGLGNVTYASYYTNPVNTATYGGDIATDYSLPTRRLGTFRFA
FSVSLTDNEIRSSNAVPQVLQSMNLAYFNQYARTVLLHSAPKNRENLSMNWSRGRWSAFVQESRYGSLIYAATPSLPTNL
WLVQRPAFITNIEVSYRVLPQWTVAVGANNLGDKYPTRLNPKSIATSFNAYKYSFFSPYGFNGGMYYVRTGLNF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94114; Mature: 93982

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMPKHSGAKTFLLGSAAMGALLLQGAFGPAYAATTSPDPSEVTQPRKPARHKPAPATHG
CCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCC
APAQGATQRQAADKAAASSALKTSSEDITVSGTAAPGNNVLSTSTRRHSTTQVTVISASD
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEEEECCC
LKATGQTNLIQALSQMMPSVSAPPLPGVGNNAFVQTMQLRGLSADQTLILVNGHRRHLGA
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEECCCCCCCCEEEEECCCCCEECC
NFNANAGPNWGTEPADISLIPVGAVDHIEVITEGATALYGQDAIAGAVNIVLKEDTQGLS
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEECCCCHHCCEEEEEEECCCCCCC
ANFKNSGYYAGDGQALDGSITKGFAIGRHGGYLDLSAQITHQLPTSRTGDYINPATYPND
CCCCCCCEECCCCCEECCCCCCCEEECCCCCEEEEEEHEEECCCCCCCCCCCCCCCCCCC
LYYALPGGQVDPRAAALGRNIQRILGIPKQTRESISANMGIPITDSIKFYSTDTYGHRRV
EEEECCCCCCCHHHHHHHCHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEC
NAAENFRSAADDLTVNAIWPNGMQPYLDLEENDFEVDNGFKGTTAGFNWDTYVNYGRDIQ
CHHHHHHHHHCCEEEEEECCCCCCCCEECCCCCEECCCCCCCCCCCCCCHHHHHCCCHHH
RYWMQDTDNPTYGVNSPTKFDTGSAVTSQLTAGFRASHALRLGFLPKLANVEFGAEYRRD
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHCCEEEEECCCCCCCCCCCHHHHHH
MFAMGPGVYESYGDGGVPILEGPNAGKTANPGSADHAGNPPLAVTNQNRDVYDGHVNLDF
HHHCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCEEEEEE
YVLPRWEWTLGGRATSYNNLATVTTGSVGTRYNFSDRFALRASINTGYRPPTLGQEYYFY
EEEECEEEECCCCCCCCCCEEEEEECCCCCEECCCCCEEEEEECCCCCCCCCCCCCEEEE
SAPFATYSIDQLPSNSAPARALGAHALKGEYSRSYSVGVDATPVDNWHVTGNLYYIAIND
ECCCCEEEHHHCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEECEEEEEEECC
RLASTTTLGGAGVGALLASAGLGNVTYASYYTNPVNTATYGGDIATDYSLPTRRLGTFRF
CCCCEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCHHCCEEEE
AFSVSLTDNEIRSSNAVPQVLQSMNLAYFNQYARTVLLHSAPKNRENLSMNWSRGRWSAF
EEEEEECCCHHHCCCHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCCCEEECCCCHHHHH
VQESRYGSLIYAATPSLPTNLWLVQRPAFITNIEVSYRVLPQWTVAVGANNLGDKYPTRL
HHHCCCCCEEEEECCCCCCCEEEEECCCEEEEEEEEEEECCEEEEEECCCCCCCCCCCCC
NPKSIATSFNAYKYSFFSPYGFNGGMYYVRTGLNF
CHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
TMPKHSGAKTFLLGSAAMGALLLQGAFGPAYAATTSPDPSEVTQPRKPARHKPAPATHG
CCCCCCCCCEEEEEHHHHHHHHHHCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCC
APAQGATQRQAADKAAASSALKTSSEDITVSGTAAPGNNVLSTSTRRHSTTQVTVISASD
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEEEECCC
LKATGQTNLIQALSQMMPSVSAPPLPGVGNNAFVQTMQLRGLSADQTLILVNGHRRHLGA
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEECCCCCCCCEEEEECCCCCEECC
NFNANAGPNWGTEPADISLIPVGAVDHIEVITEGATALYGQDAIAGAVNIVLKEDTQGLS
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEECCCCHHCCEEEEEEECCCCCCC
ANFKNSGYYAGDGQALDGSITKGFAIGRHGGYLDLSAQITHQLPTSRTGDYINPATYPND
CCCCCCCEECCCCCEECCCCCCCEEECCCCCEEEEEEHEEECCCCCCCCCCCCCCCCCCC
LYYALPGGQVDPRAAALGRNIQRILGIPKQTRESISANMGIPITDSIKFYSTDTYGHRRV
EEEECCCCCCCHHHHHHHCHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEC
NAAENFRSAADDLTVNAIWPNGMQPYLDLEENDFEVDNGFKGTTAGFNWDTYVNYGRDIQ
CHHHHHHHHHCCEEEEEECCCCCCCCEECCCCCEECCCCCCCCCCCCCCHHHHHCCCHHH
RYWMQDTDNPTYGVNSPTKFDTGSAVTSQLTAGFRASHALRLGFLPKLANVEFGAEYRRD
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHCCEEEEECCCCCCCCCCCHHHHHH
MFAMGPGVYESYGDGGVPILEGPNAGKTANPGSADHAGNPPLAVTNQNRDVYDGHVNLDF
HHHCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCEEEEEE
YVLPRWEWTLGGRATSYNNLATVTTGSVGTRYNFSDRFALRASINTGYRPPTLGQEYYFY
EEEECEEEECCCCCCCCCCEEEEEECCCCCEECCCCCEEEEEECCCCCCCCCCCCCEEEE
SAPFATYSIDQLPSNSAPARALGAHALKGEYSRSYSVGVDATPVDNWHVTGNLYYIAIND
ECCCCEEEHHHCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEECEEEEEEECC
RLASTTTLGGAGVGALLASAGLGNVTYASYYTNPVNTATYGGDIATDYSLPTRRLGTFRF
CCCCEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCHHCCEEEE
AFSVSLTDNEIRSSNAVPQVLQSMNLAYFNQYARTVLLHSAPKNRENLSMNWSRGRWSAF
EEEEEECCCHHHCCCHHHHHHHHCCHHHHHHHHHEEEEECCCCCCCCCEEECCCCHHHHH
VQESRYGSLIYAATPSLPTNLWLVQRPAFITNIEVSYRVLPQWTVAVGANNLGDKYPTRL
HHHCCCCCEEEEECCCCCCCEEEEECCCEEEEEEEEEEECCEEEEEECCCCCCCCCCCCC
NPKSIATSFNAYKYSFFSPYGFNGGMYYVRTGLNF
CHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA