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The map label for this gene is ycaR [C]

Identifier: 162146014

GI number: 162146014

Start: 195995

End: 196186

Strand: Reverse

Name: ycaR [C]

Synonym: GDI_0182

Alternate gene names: 162146014

Gene position: 196186-195995 (Counterclockwise)

Preceding gene: 162146015

Following gene: 162146012

Centisome position: 4.97

GC content: 70.31

Gene sequence:

>192_bases
ATGACCGAAACCGCCCAAGCCCCCCTGGACCCCCGCCTGCTGTCCGTCCTGGTCTGCCCCGTCACCAAGGGGCCGCTGAT
CTATGACCGCGAGGCCGGCGAGCTGATCAGCCGCCAGGCCGGCCTGGCCTTCCCGATCCGCGACGGGATTCCCATCATGC
TGCCGGACGAAGCCCGCCCGCTGGACGTGTAG

Upstream 100 bases:

>100_bases
GAACGTTGCAGACCCTGCTGGACCTGGCTGGACATGAGCCCGAGGAGGGTGCATCTGACCACCCGCCGTCGTAAGGATGG
CAGGAGAGAGGACCGATCCG

Downstream 100 bases:

>100_bases
GAAGACGAATTGGGGTCAAGGGGTCCCCAACCCCTTGCCGGCCCGGGCCGGGCCCGGCTCTTCTTCCCCAGCTACCGGCA
CGTTGTCGATCAGGCGGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MTETAQAPLDPRLLSVLVCPVTKGPLIYDREAGELISRQAGLAFPIRDGIPIMLPDEARPLDV

Sequences:

>Translated_63_residues
MTETAQAPLDPRLLSVLVCPVTKGPLIYDREAGELISRQAGLAFPIRDGIPIMLPDEARPLDV
>Mature_62_residues
TETAQAPLDPRLLSVLVCPVTKGPLIYDREAGELISRQAGLAFPIRDGIPIMLPDEARPLDV

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=53, Percent_Identity=52.8301886792453, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y182_GLUDA (A9H298)

Other databases:

- EMBL:   CP001189
- EMBL:   AM889285
- RefSeq:   YP_001600472.1
- RefSeq:   YP_002276622.1
- ProteinModelPortal:   A9H298
- SMR:   A9H298
- GeneID:   5788672
- GeneID:   6975681
- GenomeReviews:   AM889285_GR
- GenomeReviews:   CP001189_GR
- KEGG:   gdj:Gdia_2252
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- ProtClustDB:   CLSK971278
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 6841; Mature: 6710

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETAQAPLDPRLLSVLVCPVTKGPLIYDREAGELISRQAGLAFPIRDGIPIMLPDEARP
CCCCCCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHCCCCEEECCCCCCEEECCCCCC
LDV
CCC
>Mature Secondary Structure 
TETAQAPLDPRLLSVLVCPVTKGPLIYDREAGELISRQAGLAFPIRDGIPIMLPDEARP
CCCCCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHCCCCEEECCCCCCEEECCCCCC
LDV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA