Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yejL [C]

Identifier: 162139899

GI number: 162139899

Start: 1896852

End: 1897070

Strand: Reverse

Name: yejL [C]

Synonym: Sama_1556

Alternate gene names: 162139899

Gene position: 1897070-1896852 (Counterclockwise)

Preceding gene: 119774695

Following gene: 119774692

Centisome position: 44.05

GC content: 53.88

Gene sequence:

>219_bases
ATGGCTATTCAATCTAAATACACCAATACCCAAGTGGAAACCCTGATTGCAGAAGTACTGGCCGTGCTGGAAAAACATCA
GGCACCTACCGACCTTGGCCTGATGGTACTGGGCAACTGCGTCAGCCACCTGCTGGAAACCAAGGTGCCTGTTGCCAGCC
GCGCCGCTGTGGCCGAGCAGTTTGCCAAGGCACTGAATCAGTCAGTGTCAAAAGCCTGA

Upstream 100 bases:

>100_bases
GCCTGTTCTACTTTAATCGTCATACGCCTTGATAGTGATAGCCGTGGAAATCCGGTATTATATGCCGCTAACCCAATCCT
TTGTGAAACATTTTTTGACT

Downstream 100 bases:

>100_bases
TAAAGCTGGCACCCACACGGGAAAAGTGCTTAAGATACCAAGGTGTTAACCTGTCCCAAGTATAAGAGCGAACGGAATGG
TTGAGAGGAAACAACAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MAIQSKYTNTQVETLIAEVLAVLEKHQAPTDLGLMVLGNCVSHLLETKVPVASRAAVAEQFAKALNQSVSKA

Sequences:

>Translated_72_residues
MAIQSKYTNTQVETLIAEVLAVLEKHQAPTDLGLMVLGNCVSHLLETKVPVASRAAVAEQFAKALNQSVSKA
>Mature_71_residues
AIQSKYTNTQVETLIAEVLAVLEKHQAPTDLGLMVLGNCVSHLLETKVPVASRAAVAEQFAKALNQSVSKA

Specific function: Unknown

COG id: COG3082

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0352 family [H]

Homologues:

Organism=Escherichia coli, GI1788514, Length=67, Percent_Identity=55.2238805970149, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009857
- InterPro:   IPR023202
- ProDom:   PD027794 [H]

Pfam domain/function: PF07208 DUF1414 [H]

EC number: NA

Molecular weight: Translated: 7677; Mature: 7546

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQSKYTNTQVETLIAEVLAVLEKHQAPTDLGLMVLGNCVSHLLETKVPVASRAAVAEQ
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FAKALNQSVSKA
HHHHHHHHHCCC
>Mature Secondary Structure 
AIQSKYTNTQVETLIAEVLAVLEKHQAPTDLGLMVLGNCVSHLLETKVPVASRAAVAEQ
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FAKALNQSVSKA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]