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The map label for this gene is flaA [H]

Identifier: 109947905

GI number: 109947905

Start: 1215794

End: 1217326

Strand: Reverse

Name: flaA [H]

Synonym: Hac_1403

Alternate gene names: 109947905

Gene position: 1217326-1215794 (Counterclockwise)

Preceding gene: 162139479

Following gene: 109947904

Centisome position: 78.34

GC content: 44.36

Gene sequence:

>1533_bases
ATGGCTTTTCAGGTCAATACAAATATCAATGCGATGAATGCACATGTGCAATCCGCACTCACTCAAAACGCGCTTAAAAC
TTCGTTAGAGCGATTGAGTTCAGGTTTAAGGATTAATAAAGCGGCTGATGACGCATCAGGCATGACGGTGGCGGATTCTT
TGCGCTCACAAGCGAGCAGTTTGGGTCAAGCGATCGCTAACACTAATGACGGCATGGGGATTATCCAAGTTGCGGATAAG
GCTATGGATGAGCAATTGAAAATCTTAGACACCGTTAAGGTTAAGGCGACTCAAGCGGCTCAAGATGGGCAAACTACAGA
GTCTCGTAAGGCGATCCAATCGGATATTGTTCGTTTGATCCAAGGTTTGGATAATATTGGTAACACGACTACTTATAATG
GGCAAGCATTATTGTCTGGTCAATTCACTAACAAAGAATTCCAAGTAGGGGCCTATTCTAACCAAAGCATTAAAGCTTCT
ATCGGCTCTACCACTTCAGATAAAATCGGTCAAGTTCGTATCGCTACGGGTGCGTTAATCACGGCTTCTGGAGATATTAG
TTTGACTTTCAAACAAGTGGATGGCGTGAATGATGTGACTTTAGAGAGCGTAAAAATCTCTAGTTCAGCAGGCACAGGGA
TTGGCGTGTTAGCAGAAGTGATCAACAAAAACTCTAACCGAACCGGCGTTAAAGCTTATGCGAGCGTTATCACCACGAGC
GATACGGCAGTCCAATCAGGAAGCGTGAACAATTTAACCTTAAATGGGATCCATTTGGGCAGTATCGTAGATGTTAAGAA
AAACGACTCAGACGGAAGGTTAGTCGCAGCGATCAATGCGGTTACTTCAGAAACCGGCGTGGAAGCCTATACCGATCAAA
ATGGGCGCTTGAATTTGCGTAGCCTGGATGGTCGTGGGATTGAAATCAAAACCGATAGCGTGAGCGATGGACCTAGTGCT
TTAACGATGGTCAATGGCGGTCAGGATTTAACGCAAGGCTCTATGAACTATGGGAGGCTTTCTCTCACACGATTGGACGC
TAAAAGCATCAATGTGGTTTCGGCTTCTGACTCTCAGCATTTAGGCTTCACAGCGATTGGTTTTGGGGAATCTCAGGTGG
CAGAAACCACAGTGAATTTGCGCGATGTTACTGGGAAGTTTGACGCTAATGTCAAATCAGCTAGTGGCGCGAACTATAAC
GCAGTCATCGCTAGCGGTAATCAAAGCCTAGGCTCTGGGGTAACTACTTTGAGAGGTGCGATGGTGGTGATTGATATTGC
GGAATCTGCGATGAAAATGTTGGATAAAGTCCGCTCTGATTTGGGTTCTGTGCAAAATCAAATGATTAGCACCGTGAATA
ATATCAGTATCACTCAAGTGAATGTCAAAGCGGCTGAATCTCAAATTAGGGATGTGGATTTTGCTGAAGAGAGTGCGAAT
TTCAATAAAAATAACATTTTGGCACAATCAGGTAGCTATGCGATGAGTCAAGCCAATACCGTTCAACAAAACATCTTAAG
GCTTTTAACTTAG

Upstream 100 bases:

>100_bases
TTTTATTTTCAAAGCTCTTTAAGATTTTAAACTTTAACCGATTATAGTTCCAACCAAAAGCAAGGATGCCTTTGGGTTTT
TATAACAAGGAGTTACAACA

Downstream 100 bases:

>100_bases
TTTTAAGAAAGGTGTTTGTGTAAGGTGTTTGTGTGGGGCTAACGCTTTAAGCGTTGGCTTTTTCGCTTTAATTTTCACTT
CTTTTTTATAAAATACTTTT

Product: flagellin A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MAFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQAIANTNDGMGIIQVADK
AMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKAS
IGSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNRTGVKAYASVITTS
DTAVQSGSVNNLTLNGIHLGSIVDVKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDGRGIEIKTDSVSDGPSA
LTMVNGGQDLTQGSMNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGKFDANVKSASGANYN
AVIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESAN
FNKNNILAQSGSYAMSQANTVQQNILRLLT

Sequences:

>Translated_510_residues
MAFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQAIANTNDGMGIIQVADK
AMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKAS
IGSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNRTGVKAYASVITTS
DTAVQSGSVNNLTLNGIHLGSIVDVKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDGRGIEIKTDSVSDGPSA
LTMVNGGQDLTQGSMNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGKFDANVKSASGANYN
AVIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESAN
FNKNNILAQSGSYAMSQANTVQQNILRLLT
>Mature_509_residues
AFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASSLGQAIANTNDGMGIIQVADKA
MDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASI
GSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSD
TAVQSGSVNNLTLNGIHLGSIVDVKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLRSLDGRGIEIKTDSVSDGPSAL
TMVNGGQDLTQGSMNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGKFDANVKSASGANYNA
VIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANF
NKNNILAQSGSYAMSQANTVQQNILRLLT

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Important for motility and virulence [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=202, Percent_Identity=31.6831683168317, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 53333; Mature: 53202

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASS
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHH
LGQAIANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLI
HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHH
QGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALI
HHHHHCCCCEEECCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECEEE
TASGDISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNRTGVKAYASVITTS
EECCCEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC
DTAVQSGSVNNLTLNGIHLGSIVDVKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLR
CHHCCCCCCCEEEECCEEECEEEEEECCCCCCEEEEEEEHHHCCCCCEEEECCCCEEEEE
SLDGRGIEIKTDSVSDGPSALTMVNGGQDLTQGSMNYGRLSLTRLDAKSINVVSASDSQH
ECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCC
LGFTAIGFGESQVAETTVNLRDVTGKFDANVKSASGANYNAVIASGNQSLGSGVTTLRGA
CCEEEECCCCHHHHHHEEEHEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCE
MVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESAN
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCCHHHCCC
FNKNNILAQSGSYAMSQANTVQQNILRLLT
CCCCCEEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLRSQASS
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHH
LGQAIANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLI
HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHH
QGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALI
HHHHHCCCCEEECCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECEEE
TASGDISLTFKQVDGVNDVTLESVKISSSAGTGIGVLAEVINKNSNRTGVKAYASVITTS
EECCCEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC
DTAVQSGSVNNLTLNGIHLGSIVDVKKNDSDGRLVAAINAVTSETGVEAYTDQNGRLNLR
CHHCCCCCCCEEEECCEEECEEEEEECCCCCCEEEEEEEHHHCCCCCEEEECCCCEEEEE
SLDGRGIEIKTDSVSDGPSALTMVNGGQDLTQGSMNYGRLSLTRLDAKSINVVSASDSQH
ECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCC
LGFTAIGFGESQVAETTVNLRDVTGKFDANVKSASGANYNAVIASGNQSLGSGVTTLRGA
CCEEEECCCCHHHHHHEEEHEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCE
MVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESAN
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCCHHHCCC
FNKNNILAQSGSYAMSQANTVQQNILRLLT
CCCCCEEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]