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The map label for this gene is rimP [H]

Identifier: 161870485

GI number: 161870485

Start: 1569824

End: 1570255

Strand: Direct

Name: rimP [H]

Synonym: NMCC_1541

Alternate gene names: 161870485

Gene position: 1569824-1570255 (Clockwise)

Preceding gene: 161870480

Following gene: 161870486

Centisome position: 72.9

GC content: 51.39

Gene sequence:

>432_bases
ATGGATATCCAAACCATCCTCGAAAAAACCCTGCCCGGCCTGGGCTACGAACTGGTCGATTTTGAACTGACCGCGCAAGG
AACATTGCGCGTGTTCATCGACAAAGAAGGCGGCATTACCGTCGAAGACTGCGCAACCGTCAGCAACCACTTGAGCCGCG
TCTTCATGGTTGAAGACATCGACTACAAAAACCTGGAAATTTCCAGCCCCGGACTCGATCGCCCCTTGAAAAAAGCCGCC
GACTTCGTGCGCTTTGCCGGTCAGAATGCCAAAATCAAAACCCGCCTGCCGATAGATGGTCAGAAAAACTTTATCGGTAA
AATCGAAGGCTGCGAAAACGATACCGTTACCATATCCTTCGACGGCAAAACCGTGCAAATCGGGTTGGACAACATCGACA
AAGCCCGCCTGCGCCCCGAATTCAAATTCTAA

Upstream 100 bases:

>100_bases
TTTCATTTCTCCGCAAAAGCGGTTATAATTACGCCGATTTTTCAACTTTGACGAAAAATGGCCACGGGGCCATTTTTTTA
TTATGTACATAGGGAGCAGC

Downstream 100 bases:

>100_bases
AACACAACAATATTGGAGATGTTCAAAATGAGTCGTGAAATGTTACAGCTGGCAGAAGCACTGGCAAGCGAAAAAAACGT
TGATGCCGAAGTCGTCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDCATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAA
DFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTVTISFDGKTVQIGLDNIDKARLRPEFKF

Sequences:

>Translated_143_residues
MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDCATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAA
DFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTVTISFDGKTVQIGLDNIDKARLRPEFKF
>Mature_143_residues
MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDCATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAA
DFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTVTISFDGKTVQIGLDNIDKARLRPEFKF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=134, Percent_Identity=41.7910447761194, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 15967; Mature: 15967

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDCATVSNHLSRVFMVEDI
CCHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEECCCCEEHHHHHHHHHHHHEEEEEECC
DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTVTISF
CCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEE
DGKTVQIGLDNIDKARLRPEFKF
CCEEEEEECCCCCCHHCCCCCCC
>Mature Secondary Structure
MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDCATVSNHLSRVFMVEDI
CCHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEECCCCEEHHHHHHHHHHHHEEEEEECC
DYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQKNFIGKIEGCENDTVTISF
CCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEE
DGKTVQIGLDNIDKARLRPEFKF
CCEEEEEECCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA