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The map label for this gene is lbpB [H]

Identifier: 161870406

GI number: 161870406

Start: 1475079

End: 1477256

Strand: Reverse

Name: lbpB [H]

Synonym: NMCC_1453

Alternate gene names: 161870406

Gene position: 1477256-1475079 (Counterclockwise)

Preceding gene: 161870408

Following gene: 161870405

Centisome position: 68.6

GC content: 46.83

Gene sequence:

>2178_bases
ATGTGTAAACCGAATTATGGCGGCATTGTCTTGTTGCCCTTACTTTTGGCATCTTGTATCGGCGGCAATTTCGGCGTGCA
GCCTGTTGTCGAATCAACGCCGACCGCGCCAACTCTGTCAGATTCCAAATCTTCCAATCCTGCGGATAAGCCTGCTCCAG
CTCCTGCCGAGCCTTCGGTAGAAACCACGCCGGTCAACCGGCCCGCCGTCGGTGCGGCAATGCGGCTGTTGAGGCGGAAT
ACTGCTTTTCATCGTGAAGATGGCACGGCAATTCCCGATAGCAAACAAGCAGAAGAAAAGCTGTCGTTTAAAGAAGGTGA
TGTTCTGTTTTTATACGGTTCAAAAGAAAATAAACTTCAACAACTTAAAAGCGAAATTCATAAACGTGATCCTAATGTAA
AAATTAGGACATCAGAAAATGAAAATGAAAAATATAGTTATAAATTTGTAGATGCAGGTTATGTGTTTGCTAAAGACGGA
AAAGATGAAATTGAGAAAACATCGGATGAAAAGCAGTTTTCTAATCGTTTAGGCTATGACGGTTTTGTATATTATCTCGG
AGAACATCCTTCCCAATCTTTACCGAGCGCGGGAACGGTGAAATATTCCGGCAACTGGCAATATATGACCGATGCCATAC
GTCATCGGAGAGGTAAGGGGGTTTCCAGTGTGGATTTGGGTTATACCACATATTATGGTAATGAAATTGGGGCAGCTTCT
TATGAGGCTAGGGATGCCGATGGCCGGGAAAAACATCCTGCCGAATATACGGTTAATTTCGACAAAAAAAACCTGGAAGG
TAAGTTGATTAAAAATCAGTATGTGCAAAAGAGAGATGATCCTAAAAATCCACTGACCATTTACAACATTACTGCAACAT
TGGACGGAAACCGCTTTACCGGCAGTGCCGAGGTCAATCCTGATTTAGCGAAAAACCATGCCGGTAAGGAGCATTTGTTT
TTCCATACCAATGCCGATCGGCGGCTTGAGGGCGGTTTTTTCGGCGATAACGGAGAAGAGCTTGCCGGACGGTTTATCAG
CAACGACAACAGCGTATTCGGCGTATTCGCAGGCAAACAAAAAACAGAGGCAGCAAACGCAGCAGATACAAAACCTGCCC
TGACGTCTGGAAAACACACCAAAATCTTGGATTCTCTAAAAATTTCCGTTGATGAGGCAAGTGATGAAAATCCCCGACCG
TTTGAGGTTTCCACTATGCCCGATTTTGGTCATCCCGACAAACTTCTTGTCGAAGGGCGTGAAATCTCCTTGCTCAAAGA
TACTCAAACCATCGTTCTTGCCGACGGCAGGAAAAAGACAATCCGAGCCTGCTGCGATTTTCTGAACTATGTGAAAATCG
GACGGATGCAAACCGAACGCCCCGCCGTCAAACCGAAGGCGCAGGATGAAGAGGGGGACGAAGAGGATGCAGGCGTTGAT
AACGGCGAAGACGAAGAAGAAATCGCCGAAGAAAGCGAAGACGAAGTTTCCGAAGATGAAGGCGAAGAAGCCGAAGTTTC
CGAAGATGAAAGCGAAGAAGACGAAGAAATCGTCGAAGAAGAAACCGAAGAAGAAGCTGAACCCGAAGAAGCCGAAGAAA
CCGAAGAAGAATCGCCGGCAGAAAGCGGCAGCGGTTCAAACGCCATCCTGCCTGCCCCGGAAGCCCCTAAAGGCAGGGAT
ATCGACCTTTTCCTGAAAGGTATCCGCACGGCGGAAGCCGACATTCCGCAAACTGGAAAAGCACACTATACCGGCACTTG
GGAAGCGCGTATCGGCGTGCCGGATAAGAAAGGCGAACAGCTAGATGGCACTACGTCCATTCAAAAGGATAGCTATGCGA
ATCAAGCGGCAAAAGCAGAATTTGACGTTGATTTTGGTGCGAAGTCGCTTTCAGGTAAGTTGACAGAAAAAAATGATACA
AACCCCGCTTTTTATATTGAAAAAGGTGTGATTGATGGCAACGGTTTCCACGCTTTGGCGCGTACTCGTGAAAATGGTGT
TGATTTGTCTGGGCAAGGTTCGACTAATCCCCAAAGTTTTAAAGCCAGTAATCTTCTCGTAGAAGGAGGATTTTATGGTC
CGCAGGCGGCAGAATTGGGCGGTAATATTATCGACAGCGACCGGAAATTCGGTGCGGTATTTGGGGCGAAAAAAGATGAC
AAGGAGGCAACACGATGA

Upstream 100 bases:

>100_bases
GTCCTGATTTTTGTTAATTCACTATAAAAACGGCTTGATATTATCTGTACATATTAATATAATGATAATTATTATTAATC
AAATAGGAGGAAAAGTAGGG

Downstream 100 bases:

>100_bases
ACAGAAGGCATACATTCCCACTTACCCTGACCGCCTTGGCTGTTGCAACCGCTTTTCCGGCTTATGCCGCCCAAGCGGGG
GTGGCGGCACCTGATGCCGC

Product: lactoferrin-binding protein

Products: NA

Alternate protein names: TBP-2 [H]

Number of amino acids: Translated: 725; Mature: 725

Protein sequence:

>725_residues
MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAPTLSDSKSSNPADKPAPAPAEPSVETTPVNRPAVGAAMRLLRRN
TAFHREDGTAIPDSKQAEEKLSFKEGDVLFLYGSKENKLQQLKSEIHKRDPNVKIRTSENENEKYSYKFVDAGYVFAKDG
KDEIEKTSDEKQFSNRLGYDGFVYYLGEHPSQSLPSAGTVKYSGNWQYMTDAIRHRRGKGVSSVDLGYTTYYGNEIGAAS
YEARDADGREKHPAEYTVNFDKKNLEGKLIKNQYVQKRDDPKNPLTIYNITATLDGNRFTGSAEVNPDLAKNHAGKEHLF
FHTNADRRLEGGFFGDNGEELAGRFISNDNSVFGVFAGKQKTEAANAADTKPALTSGKHTKILDSLKISVDEASDENPRP
FEVSTMPDFGHPDKLLVEGREISLLKDTQTIVLADGRKKTIRACCDFLNYVKIGRMQTERPAVKPKAQDEEGDEEDAGVD
NGEDEEEIAEESEDEVSEDEGEEAEVSEDESEEDEEIVEEETEEEAEPEEAEETEEESPAESGSGSNAILPAPEAPKGRD
IDLFLKGIRTAEADIPQTGKAHYTGTWEARIGVPDKKGEQLDGTTSIQKDSYANQAAKAEFDVDFGAKSLSGKLTEKNDT
NPAFYIEKGVIDGNGFHALARTRENGVDLSGQGSTNPQSFKASNLLVEGGFYGPQAAELGGNIIDSDRKFGAVFGAKKDD
KEATR

Sequences:

>Translated_725_residues
MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAPTLSDSKSSNPADKPAPAPAEPSVETTPVNRPAVGAAMRLLRRN
TAFHREDGTAIPDSKQAEEKLSFKEGDVLFLYGSKENKLQQLKSEIHKRDPNVKIRTSENENEKYSYKFVDAGYVFAKDG
KDEIEKTSDEKQFSNRLGYDGFVYYLGEHPSQSLPSAGTVKYSGNWQYMTDAIRHRRGKGVSSVDLGYTTYYGNEIGAAS
YEARDADGREKHPAEYTVNFDKKNLEGKLIKNQYVQKRDDPKNPLTIYNITATLDGNRFTGSAEVNPDLAKNHAGKEHLF
FHTNADRRLEGGFFGDNGEELAGRFISNDNSVFGVFAGKQKTEAANAADTKPALTSGKHTKILDSLKISVDEASDENPRP
FEVSTMPDFGHPDKLLVEGREISLLKDTQTIVLADGRKKTIRACCDFLNYVKIGRMQTERPAVKPKAQDEEGDEEDAGVD
NGEDEEEIAEESEDEVSEDEGEEAEVSEDESEEDEEIVEEETEEEAEPEEAEETEEESPAESGSGSNAILPAPEAPKGRD
IDLFLKGIRTAEADIPQTGKAHYTGTWEARIGVPDKKGEQLDGTTSIQKDSYANQAAKAEFDVDFGAKSLSGKLTEKNDT
NPAFYIEKGVIDGNGFHALARTRENGVDLSGQGSTNPQSFKASNLLVEGGFYGPQAAELGGNIIDSDRKFGAVFGAKKDD
KEATR
>Mature_725_residues
MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAPTLSDSKSSNPADKPAPAPAEPSVETTPVNRPAVGAAMRLLRRN
TAFHREDGTAIPDSKQAEEKLSFKEGDVLFLYGSKENKLQQLKSEIHKRDPNVKIRTSENENEKYSYKFVDAGYVFAKDG
KDEIEKTSDEKQFSNRLGYDGFVYYLGEHPSQSLPSAGTVKYSGNWQYMTDAIRHRRGKGVSSVDLGYTTYYGNEIGAAS
YEARDADGREKHPAEYTVNFDKKNLEGKLIKNQYVQKRDDPKNPLTIYNITATLDGNRFTGSAEVNPDLAKNHAGKEHLF
FHTNADRRLEGGFFGDNGEELAGRFISNDNSVFGVFAGKQKTEAANAADTKPALTSGKHTKILDSLKISVDEASDENPRP
FEVSTMPDFGHPDKLLVEGREISLLKDTQTIVLADGRKKTIRACCDFLNYVKIGRMQTERPAVKPKAQDEEGDEEDAGVD
NGEDEEEIAEESEDEVSEDEGEEAEVSEDESEEDEEIVEEETEEEAEPEEAEETEEESPAESGSGSNAILPAPEAPKGRD
IDLFLKGIRTAEADIPQTGKAHYTGTWEARIGVPDKKGEQLDGTTSIQKDSYANQAAKAEFDVDFGAKSLSGKLTEKNDT
NPAFYIEKGVIDGNGFHALARTRENGVDLSGQGSTNPQSFKASNLLVEGGFYGPQAAELGGNIIDSDRKFGAVFGAKKDD
KEATR

Specific function: Acts as a transferrin receptor and is required for transferrin utilization [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001677 [H]

Pfam domain/function: PF01298 Lipoprotein_5 [H]

EC number: NA

Molecular weight: Translated: 79287; Mature: 79287

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAPTLSDSKSSNPADKPAPAPAEPSV
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ETTPVNRPAVGAAMRLLRRNTAFHREDGTAIPDSKQAEEKLSFKEGDVLFLYGSKENKLQ
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCHHHHH
QLKSEIHKRDPNVKIRTSENENEKYSYKFVDAGYVFAKDGKDEIEKTSDEKQFSNRLGYD
HHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCEEEECCCHHHHHHCHHHHHHHHHCCCC
GFVYYLGEHPSQSLPSAGTVKYSGNWQYMTDAIRHRRGKGVSSVDLGYTTYYGNEIGAAS
EEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCC
YEARDADGREKHPAEYTVNFDKKNLEGKLIKNQYVQKRDDPKNPLTIYNITATLDGNRFT
CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEEE
GSAEVNPDLAKNHAGKEHLFFHTNADRRLEGGFFGDNGEELAGRFISNDNSVFGVFAGKQ
CCCCCCHHHHHCCCCCCEEEEECCCCCEECCCCCCCCHHHHHHHHCCCCCCEEEEECCCC
KTEAANAADTKPALTSGKHTKILDSLKISVDEASDENPRPFEVSTMPDFGHPDKLLVEGR
CCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCCCCCEEECCC
EISLLKDTQTIVLADGRKKTIRACCDFLNYVKIGRMQTERPAVKPKAQDEEGDEEDAGVD
EEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCC
NGEDEEEIAEESEDEVSEDEGEEAEVSEDESEEDEEIVEEETEEEAEPEEAEETEEESPA
CCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC
ESGSGSNAILPAPEAPKGRDIDLFLKGIRTAEADIPQTGKAHYTGTWEARIGVPDKKGEQ
CCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCC
LDGTTSIQKDSYANQAAKAEFDVDFGAKSLSGKLTEKNDTNPAFYIEKGVIDGNGFHALA
CCCCCCCCCCHHHHHHHCCEEECCCCCHHHCCCCCCCCCCCCEEEEEECEECCCCCCHHH
RTRENGVDLSGQGSTNPQSFKASNLLVEGGFYGPQAAELGGNIIDSDRKFGAVFGAKKDD
HHHCCCCCCCCCCCCCCCCEECCEEEEECCCCCCHHHHHCCCEECCCCCCHHEECCCCCC
KEATR
CCCCC
>Mature Secondary Structure
MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAPTLSDSKSSNPADKPAPAPAEPSV
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ETTPVNRPAVGAAMRLLRRNTAFHREDGTAIPDSKQAEEKLSFKEGDVLFLYGSKENKLQ
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCHHHHH
QLKSEIHKRDPNVKIRTSENENEKYSYKFVDAGYVFAKDGKDEIEKTSDEKQFSNRLGYD
HHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCEEEECCCHHHHHHCHHHHHHHHHCCCC
GFVYYLGEHPSQSLPSAGTVKYSGNWQYMTDAIRHRRGKGVSSVDLGYTTYYGNEIGAAS
EEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCC
YEARDADGREKHPAEYTVNFDKKNLEGKLIKNQYVQKRDDPKNPLTIYNITATLDGNRFT
CCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEEE
GSAEVNPDLAKNHAGKEHLFFHTNADRRLEGGFFGDNGEELAGRFISNDNSVFGVFAGKQ
CCCCCCHHHHHCCCCCCEEEEECCCCCEECCCCCCCCHHHHHHHHCCCCCCEEEEECCCC
KTEAANAADTKPALTSGKHTKILDSLKISVDEASDENPRPFEVSTMPDFGHPDKLLVEGR
CCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCCCCCEEECCC
EISLLKDTQTIVLADGRKKTIRACCDFLNYVKIGRMQTERPAVKPKAQDEEGDEEDAGVD
EEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCC
NGEDEEEIAEESEDEVSEDEGEEAEVSEDESEEDEEIVEEETEEEAEPEEAEETEEESPA
CCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC
ESGSGSNAILPAPEAPKGRDIDLFLKGIRTAEADIPQTGKAHYTGTWEARIGVPDKKGEQ
CCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCC
LDGTTSIQKDSYANQAAKAEFDVDFGAKSLSGKLTEKNDTNPAFYIEKGVIDGNGFHALA
CCCCCCCCCCHHHHHHHCCEEECCCCCHHHCCCCCCCCCCCCEEEEEECEECCCCCCHHH
RTRENGVDLSGQGSTNPQSFKASNLLVEGGFYGPQAAELGGNIIDSDRKFGAVFGAKKDD
HHHCCCCCCCCCCCCCCCCEECCEEEEECCCCCCHHHHHCCCEECCCCCCHHEECCCCCC
KEATR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8344530; 8319886 [H]